Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 Y_RNA.515-201ENST00000384535 112 ntBASIC3.21□□□□□ -1.9
PCDHA9Q9Y5H5 Y_RNA.569-201ENST00000384749 103 ntBASIC3.21□□□□□ -1.9
PCDHA9Q9Y5H5 SNORA12-201ENST00000391162 147 ntBASIC3.21□□□□□ -1.9
PCDHA9Q9Y5H5 AL603910.2-201ENST00000407268 136 ntBASIC3.21□□□□□ -1.9
PCDHA9Q9Y5H5 Y_RNA.597-201ENST00000410463 100 ntBASIC3.21□□□□□ -1.9
PCDHA9Q9Y5H5 RPS29P4-201ENST00000414733 161 ntBASIC3.21□□□□□ -1.9
PCDHA9Q9Y5H5 YME1L1P1-201ENST00000429435 297 ntBASIC3.21□□□□□ -1.9
PCDHA9Q9Y5H5 RPS12P18-201ENST00000442381 270 ntBASIC3.21□□□□□ -1.9
PCDHA9Q9Y5H5 RPL27AP5-201ENST00000469428 449 ntBASIC3.21□□□□□ -1.9
PCDHA9Q9Y5H5 HMGB3P17-201ENST00000504195 649 ntBASIC3.21□□□□□ -1.9
PCDHA9Q9Y5H5 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.21□□□□□ -1.9
PCDHA9Q9Y5H5 PHBP14-201ENST00000512887 367 ntBASIC3.21□□□□□ -1.9
PCDHA9Q9Y5H5 SCARNA24.2-201ENST00000516968 130 ntBASIC3.21□□□□□ -1.9
PCDHA9Q9Y5H5 IGKV2-26-201ENST00000518305 343 ntBASIC3.21□□□□□ -1.9
PCDHA9Q9Y5H5 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDHA9Q9Y5H5 MIR3922-201ENST00000585192 84 ntBASIC3.21□□□□□ -1.9
PCDHA9Q9Y5H5 AC008749.1-201ENST00000597650 306 ntBASIC3.21□□□□□ -1.9
PCDHA9Q9Y5H5 SNORA51-201ENST00000606420 132 ntBASIC3.21□□□□□ -1.9
PCDHA9Q9Y5H5 AC037487.3-201ENST00000606668 112 ntBASIC3.21□□□□□ -1.9
PCDHA9Q9Y5H5 BX284668.6-201ENST00000606899 438 ntBASIC3.21□□□□□ -1.9
PCDHA9Q9Y5H5 AC006133.1-201ENST00000617106 264 ntBASIC3.21□□□□□ -1.9
PCDHA9Q9Y5H5 MIR3674-201ENST00000636576 68 ntBASIC3.21□□□□□ -1.9
PCDHA9Q9Y5H5 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHA9Q9Y5H5 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHA9Q9Y5H5 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHA9Q9Y5H5 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDHA9Q9Y5H5 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHA9Q9Y5H5 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHA9Q9Y5H5 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHA9Q9Y5H5 RNU1-72P-201ENST00000362976 153 ntBASIC3.2□□□□□ -1.9
PCDHA9Q9Y5H5 Y_RNA.331-201ENST00000365267 102 ntBASIC3.2□□□□□ -1.9
PCDHA9Q9Y5H5 Y_RNA.415-201ENST00000384012 112 ntBASIC3.2□□□□□ -1.9
PCDHA9Q9Y5H5 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PCDHA9Q9Y5H5 RNA5SP475-201ENST00000410568 110 ntBASIC3.2□□□□□ -1.9
PCDHA9Q9Y5H5 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDHA9Q9Y5H5 RPL30P4-201ENST00000429309 333 ntBASIC3.2□□□□□ -1.9
PCDHA9Q9Y5H5 NDUFB4P10-201ENST00000452541 359 ntBASIC3.2□□□□□ -1.9
PCDHA9Q9Y5H5 AC005042.3-201ENST00000453230 174 ntBASIC3.2□□□□□ -1.9
PCDHA9Q9Y5H5 FCF1P8-201ENST00000510322 597 ntBASIC3.2□□□□□ -1.9
PCDHA9Q9Y5H5 RNU6-111P-201ENST00000517179 105 ntBASIC3.2□□□□□ -1.9
PCDHA9Q9Y5H5 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDHA9Q9Y5H5 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHA9Q9Y5H5 AC055872.1-201ENST00000570978 278 ntBASIC3.2□□□□□ -1.9
PCDHA9Q9Y5H5 AC004467.1-201ENST00000615678 330 ntBASIC3.2□□□□□ -1.9
PCDHA9Q9Y5H5 AC006001.4-201ENST00000622243 395 ntBASIC3.2□□□□□ -1.9
PCDHA9Q9Y5H5 AC090517.3-201ENST00000625170 141 ntBASIC3.2□□□□□ -1.9
PCDHA9Q9Y5H5 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDHA9Q9Y5H5 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHA9Q9Y5H5 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHA9Q9Y5H5 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHA9Q9Y5H5 RNU6-1266P-201ENST00000362794 105 ntBASIC3.19□□□□□ -1.9
PCDHA9Q9Y5H5 SNORA67.2-201ENST00000384300 149 ntBASIC3.19□□□□□ -1.9
PCDHA9Q9Y5H5 RNU6-1026P-201ENST00000384465 108 ntBASIC3.19□□□□□ -1.9
PCDHA9Q9Y5H5 MIR200C-201ENST00000384980 68 ntBASIC3.19□□□□□ -1.9
PCDHA9Q9Y5H5 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.19□□□□□ -1.9
PCDHA9Q9Y5H5 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDHA9Q9Y5H5 AC146507.2-201ENST00000460608 476 ntBASIC3.19□□□□□ -1.9
PCDHA9Q9Y5H5 AC080013.2-201ENST00000460866 323 ntBASIC3.19□□□□□ -1.9
PCDHA9Q9Y5H5 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDHA9Q9Y5H5 AL713866.2-201ENST00000603579 219 ntBASIC3.19□□□□□ -1.9
PCDHA9Q9Y5H5 AC010900.2-201ENST00000604508 210 ntBASIC3.19□□□□□ -1.9
PCDHA9Q9Y5H5 U3.45-201ENST00000607547 219 ntBASIC3.19□□□□□ -1.9
PCDHA9Q9Y5H5 U2.14-201ENST00000615943 113 ntBASIC3.19□□□□□ -1.9
PCDHA9Q9Y5H5 SNORA50A-202ENST00000629536 136 ntBASIC3.19□□□□□ -1.9
PCDHA9Q9Y5H5 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHA9Q9Y5H5 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHA9Q9Y5H5 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHA9Q9Y5H5 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PCDHA9Q9Y5H5 Y_RNA.136-201ENST00000363444 102 ntBASIC3.18□□□□□ -1.9
PCDHA9Q9Y5H5 SNORD27-201ENST00000363981 72 ntBASIC3.18□□□□□ -1.9
PCDHA9Q9Y5H5 Y_RNA.539-201ENST00000384635 107 ntBASIC3.18□□□□□ -1.9
PCDHA9Q9Y5H5 MIR1294-201ENST00000408503 142 ntBASIC3.18□□□□□ -1.9
PCDHA9Q9Y5H5 RNA5SP504-201ENST00000410676 117 ntBASIC3.18□□□□□ -1.9
PCDHA9Q9Y5H5 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDHA9Q9Y5H5 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDHA9Q9Y5H5 RN7SL601P-201ENST00000471221 293 ntBASIC3.18□□□□□ -1.9
PCDHA9Q9Y5H5 RNU6-586P-201ENST00000517265 104 ntBASIC3.18□□□□□ -1.9
PCDHA9Q9Y5H5 MIR3158-1-201ENST00000583596 81 ntBASIC3.18□□□□□ -1.9
PCDHA9Q9Y5H5 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDHA9Q9Y5H5 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.18□□□□□ -1.9
PCDHA9Q9Y5H5 AC069294.1-201ENST00000608397 350 ntBASIC3.18□□□□□ -1.9
PCDHA9Q9Y5H5 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDHA9Q9Y5H5 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHA9Q9Y5H5 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.18□□□□□ -1.9
PCDHA9Q9Y5H5 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHA9Q9Y5H5 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHA9Q9Y5H5 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
PCDHA9Q9Y5H5 AL049781.1-201ENST00000623195 3585 ntBASIC3.17□□□□□ -1.9
PCDHA9Q9Y5H5 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHA9Q9Y5H5 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHA9Q9Y5H5 Y_RNA.101-201ENST00000363154 102 ntBASIC3.17□□□□□ -1.9
PCDHA9Q9Y5H5 RNU6-1274P-201ENST00000384557 107 ntBASIC3.17□□□□□ -1.9
PCDHA9Q9Y5H5 MIR1289-1-201ENST00000408836 144 ntBASIC3.17□□□□□ -1.9
PCDHA9Q9Y5H5 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDHA9Q9Y5H5 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHA9Q9Y5H5 POLR2KP2-201ENST00000438155 177 ntBASIC3.17□□□□□ -1.9
PCDHA9Q9Y5H5 SNORA84-201ENST00000459229 133 ntBASIC3.17□□□□□ -1.9
PCDHA9Q9Y5H5 AC083906.5-201ENST00000503722 328 ntBASIC3.17□□□□□ -1.9
PCDHA9Q9Y5H5 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHA9Q9Y5H5 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms