Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
PKP3Q9Y446 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
PKP3Q9Y446 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
PKP3Q9Y446 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PKP3Q9Y446 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PKP3Q9Y446 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.57□□□□□ -2
PKP3Q9Y446 RNY3P11-201ENST00000364153 102 ntBASIC2.57□□□□□ -2
PKP3Q9Y446 AC117470.1-201ENST00000381974 330 ntBASIC2.57□□□□□ -2
PKP3Q9Y446 RNU6-1032P-201ENST00000384100 107 ntBASIC2.57□□□□□ -2
PKP3Q9Y446 SNORA46.1-201ENST00000391069 153 ntBASIC2.57□□□□□ -2
PKP3Q9Y446 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.57□□□□□ -2
PKP3Q9Y446 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.57□□□□□ -2
PKP3Q9Y446 USP9YP16-201ENST00000430287 407 ntBASIC2.57□□□□□ -2
PKP3Q9Y446 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.57□□□□□ -2
PKP3Q9Y446 USP9YP23-201ENST00000455085 407 ntBASIC2.57□□□□□ -2
PKP3Q9Y446 SRIP1-201ENST00000489235 288 ntBASIC2.57□□□□□ -2
PKP3Q9Y446 ANXA2P1-201ENST00000505539 926 ntBASIC2.57□□□□□ -2
PKP3Q9Y446 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.57□□□□□ -2
PKP3Q9Y446 RPPH1-2P-201ENST00000516688 293 ntBASIC2.57□□□□□ -2
PKP3Q9Y446 RNU6-1198P-201ENST00000516904 67 ntBASIC2.57□□□□□ -2
PKP3Q9Y446 AC091144.1-201ENST00000519573 138 ntBASIC2.57□□□□□ -2
PKP3Q9Y446 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.57□□□□□ -2
PKP3Q9Y446 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.57□□□□□ -2
PKP3Q9Y446 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.57□□□□□ -2
PKP3Q9Y446 MIR3117-201ENST00000584034 78 ntBASIC2.57□□□□□ -2
PKP3Q9Y446 AL713866.2-201ENST00000603579 219 ntBASIC2.57□□□□□ -2
PKP3Q9Y446 AC040896.1-201ENST00000613819 479 ntBASIC2.57□□□□□ -2
PKP3Q9Y446 AL138825.1-201ENST00000618587 192 ntBASIC2.57□□□□□ -2
PKP3Q9Y446 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.57□□□□□ -2
PKP3Q9Y446 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PKP3Q9Y446 U3.9-201ENST00000363823 204 ntBASIC2.56□□□□□ -2
PKP3Q9Y446 SNORA25.6-201ENST00000364121 118 ntBASIC2.56□□□□□ -2
PKP3Q9Y446 SNORA33.2-201ENST00000365413 134 ntBASIC2.56□□□□□ -2
PKP3Q9Y446 Y_RNA.358-201ENST00000365491 99 ntBASIC2.56□□□□□ -2
PKP3Q9Y446 RNU6-378P-201ENST00000384324 107 ntBASIC2.56□□□□□ -2
PKP3Q9Y446 MIR487A-201ENST00000385009 80 ntBASIC2.56□□□□□ -2
PKP3Q9Y446 MIR628-201ENST00000385229 95 ntBASIC2.56□□□□□ -2
PKP3Q9Y446 AP000870.1-201ENST00000472927 406 ntBASIC2.56□□□□□ -2
PKP3Q9Y446 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.56□□□□□ -2
PKP3Q9Y446 RNU4-77P-201ENST00000516692 156 ntBASIC2.56□□□□□ -2
PKP3Q9Y446 GNAI2P1-201ENST00000541815 315 ntBASIC2.56□□□□□ -2
PKP3Q9Y446 AC027288.2-201ENST00000553028 243 ntBASIC2.56□□□□□ -2
PKP3Q9Y446 MIR3670-2-201ENST00000582974 65 ntBASIC2.56□□□□□ -2
PKP3Q9Y446 MIR3670-1-201ENST00000584160 65 ntBASIC2.56□□□□□ -2
PKP3Q9Y446 MIR3670-3-201ENST00000584855 65 ntBASIC2.56□□□□□ -2
PKP3Q9Y446 AL356280.1-201ENST00000603614 379 ntBASIC2.56□□□□□ -2
PKP3Q9Y446 MIR3670-4-201ENST00000612260 65 ntBASIC2.56□□□□□ -2
PKP3Q9Y446 PCGEM1.1-201ENST00000613431 131 ntBASIC2.56□□□□□ -2
PKP3Q9Y446 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.56□□□□□ -2
PKP3Q9Y446 MIR5739-201ENST00000619803 80 ntBASIC2.56□□□□□ -2
PKP3Q9Y446 AL606534.2-204ENST00000635008 178 ntBASIC2.56□□□□□ -2
PKP3Q9Y446 MIR4272-201ENST00000635924 64 ntBASIC2.56□□□□□ -2
PKP3Q9Y446 MTND5P16-201ENST00000460269 1703 ntBASIC2.56□□□□□ -2
PKP3Q9Y446 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
PKP3Q9Y446 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
PKP3Q9Y446 RNU6-222P-201ENST00000362438 107 ntBASIC2.55□□□□□ -2
PKP3Q9Y446 RNU6-137P-201ENST00000363680 108 ntBASIC2.55□□□□□ -2
PKP3Q9Y446 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.55□□□□□ -2
PKP3Q9Y446 Y_RNA.422-201ENST00000384054 114 ntBASIC2.55□□□□□ -2
PKP3Q9Y446 Y_RNA.592-201ENST00000410274 109 ntBASIC2.55□□□□□ -2
PKP3Q9Y446 AC114482.1-201ENST00000418010 247 ntBASIC2.55□□□□□ -2
PKP3Q9Y446 AC096644.2-201ENST00000429278 159 ntBASIC2.55□□□□□ -2
PKP3Q9Y446 AL160004.2-201ENST00000432935 350 ntBASIC2.55□□□□□ -2
PKP3Q9Y446 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.55□□□□□ -2
PKP3Q9Y446 AP001486.1-201ENST00000463339 476 ntBASIC2.55□□□□□ -2
PKP3Q9Y446 CKS1BP2-201ENST00000497342 240 ntBASIC2.55□□□□□ -2
PKP3Q9Y446 RNA5SP54-201ENST00000516951 92 ntBASIC2.55□□□□□ -2
PKP3Q9Y446 RNU6-58P-201ENST00000517143 103 ntBASIC2.55□□□□□ -2
PKP3Q9Y446 RNU6-586P-201ENST00000517265 104 ntBASIC2.55□□□□□ -2
PKP3Q9Y446 EIF4A1P12-201ENST00000551910 141 ntBASIC2.55□□□□□ -2
PKP3Q9Y446 AC006600.1-201ENST00000572529 153 ntBASIC2.55□□□□□ -2
PKP3Q9Y446 AC090617.3-201ENST00000573670 475 ntBASIC2.55□□□□□ -2
PKP3Q9Y446 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.55□□□□□ -2
PKP3Q9Y446 AC006504.6-201ENST00000590142 199 ntBASIC2.55□□□□□ -2
PKP3Q9Y446 AC022432.1-201ENST00000595739 310 ntBASIC2.55□□□□□ -2
PKP3Q9Y446 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.55□□□□□ -2
PKP3Q9Y446 U2.1-201ENST00000618978 145 ntBASIC2.55□□□□□ -2
PKP3Q9Y446 AC138305.3-201ENST00000624988 240 ntBASIC2.55□□□□□ -2
PKP3Q9Y446 AC243829.7-201ENST00000633081 225 ntBASIC2.55□□□□□ -2
PKP3Q9Y446 AC005592.1-201ENST00000566527 1640 ntBASIC2.54□□□□□ -2
PKP3Q9Y446 SNORD115-8-201ENST00000363856 82 ntBASIC2.54□□□□□ -2
PKP3Q9Y446 SNORD115-38-201ENST00000365037 82 ntBASIC2.54□□□□□ -2
PKP3Q9Y446 RNU6-639P-201ENST00000384074 107 ntBASIC2.54□□□□□ -2
PKP3Q9Y446 RNU6-220P-201ENST00000390919 107 ntBASIC2.54□□□□□ -2
PKP3Q9Y446 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.54□□□□□ -2
PKP3Q9Y446 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.54□□□□□ -2
PKP3Q9Y446 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.54□□□□□ -2
PKP3Q9Y446 AL109933.2-201ENST00000452651 260 ntBASIC2.54□□□□□ -2
PKP3Q9Y446 AC090515.1-201ENST00000465295 476 ntBASIC2.54□□□□□ -2
PKP3Q9Y446 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.54□□□□□ -2
PKP3Q9Y446 RNU6-1114P-201ENST00000516022 107 ntBASIC2.54□□□□□ -2
PKP3Q9Y446 RNU6-475P-201ENST00000516073 104 ntBASIC2.54□□□□□ -2
PKP3Q9Y446 HSPE1P18-201ENST00000517602 280 ntBASIC2.54□□□□□ -2
PKP3Q9Y446 HSBP1P1-201ENST00000555205 166 ntBASIC2.54□□□□□ -2
PKP3Q9Y446 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.54□□□□□ -2
PKP3Q9Y446 VN1R91P-201ENST00000594377 169 ntBASIC2.54□□□□□ -2
PKP3Q9Y446 AL356575.1-201ENST00000603008 283 ntBASIC2.54□□□□□ -2
PKP3Q9Y446 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.54□□□□□ -2
PKP3Q9Y446 AC008121.3-201ENST00000618726 433 ntBASIC2.54□□□□□ -2
PKP3Q9Y446 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms