Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.23□□□□□ -1.73
RTCBQ9Y3I0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RTCBQ9Y3I0 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 Y_RNA.23-201ENST00000362496 106 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 Y_RNA.121-201ENST00000363309 113 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 Y_RNA.357-201ENST00000365487 109 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 Y_RNA.488-201ENST00000384403 102 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 AL031121.1-201ENST00000406553 254 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 RNU2-2P-201ENST00000410396 191 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 YPEL5P1-201ENST00000419731 367 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 RN7SL863P-201ENST00000462370 296 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 RN7SL429P-201ENST00000479090 223 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 RN7SL489P-201ENST00000486185 223 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 RN7SL327P-201ENST00000488659 223 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 AC005840.1-201ENST00000498412 377 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 RNU6-479P-201ENST00000516348 105 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 AP004242.1-201ENST00000533701 349 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 SNRPGP20-201ENST00000604477 205 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 RNU2-4P-201ENST00000606190 192 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 U2.15-201ENST00000611544 191 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 RNVU1-4-201ENST00000612985 164 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 U2.16-201ENST00000613119 191 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 U2.12-201ENST00000613778 191 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 U2.9-201ENST00000615427 191 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 U2.11-201ENST00000616345 191 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 U2.2-201ENST00000616535 191 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 RN7SL853P-201ENST00000617250 223 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 U2.3-201ENST00000617785 191 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 U2.19-201ENST00000618602 191 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 RNU2-1-201ENST00000618664 191 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 U2.6-201ENST00000619225 191 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 U2.5-201ENST00000619465 191 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 U2.10-201ENST00000620268 191 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 AC091895.1-201ENST00000624494 256 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 MIR3199-2-201ENST00000636243 86 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 SNORD98-201ENST00000636377 67 ntBASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTCBQ9Y3I0 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.21□□□□□ -1.73
RTCBQ9Y3I0 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.73
RTCBQ9Y3I0 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.21□□□□□ -1.73
RTCBQ9Y3I0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
RTCBQ9Y3I0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTCBQ9Y3I0 RNU6-727P-201ENST00000363592 107 ntBASIC4.21□□□□□ -1.74
RTCBQ9Y3I0 SNORA18.3-201ENST00000384122 132 ntBASIC4.21□□□□□ -1.74
RTCBQ9Y3I0 RNU6-417P-201ENST00000384712 107 ntBASIC4.21□□□□□ -1.74
RTCBQ9Y3I0 Y_RNA.568-201ENST00000384742 113 ntBASIC4.21□□□□□ -1.74
RTCBQ9Y3I0 MIR208B-201ENST00000401172 77 ntBASIC4.21□□□□□ -1.74
RTCBQ9Y3I0 RPS27AP9-201ENST00000477681 438 ntBASIC4.21□□□□□ -1.74
RTCBQ9Y3I0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.21□□□□□ -1.74
RTCBQ9Y3I0 AIG1P1-201ENST00000503376 148 ntBASIC4.21□□□□□ -1.74
RTCBQ9Y3I0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.21□□□□□ -1.74
RTCBQ9Y3I0 AC009127.3-201ENST00000570531 403 ntBASIC4.21□□□□□ -1.74
RTCBQ9Y3I0 MIR4672-201ENST00000583126 81 ntBASIC4.21□□□□□ -1.74
RTCBQ9Y3I0 AC006380.1-201ENST00000603598 186 ntBASIC4.21□□□□□ -1.74
RTCBQ9Y3I0 AC006023.1-201ENST00000603944 259 ntBASIC4.21□□□□□ -1.74
RTCBQ9Y3I0 AC005520.5-201ENST00000613926 164 ntBASIC4.21□□□□□ -1.74
RTCBQ9Y3I0 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTCBQ9Y3I0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RTCBQ9Y3I0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RTCBQ9Y3I0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
RTCBQ9Y3I0 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RTCBQ9Y3I0 Y_RNA.75-201ENST00000362927 97 ntBASIC4.2□□□□□ -1.74
RTCBQ9Y3I0 RNU4-17P-201ENST00000365598 141 ntBASIC4.2□□□□□ -1.74
RTCBQ9Y3I0 Y_RNA.412-201ENST00000384001 104 ntBASIC4.2□□□□□ -1.74
RTCBQ9Y3I0 RNU6-131P-201ENST00000391144 107 ntBASIC4.2□□□□□ -1.74
RTCBQ9Y3I0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.2□□□□□ -1.74
RTCBQ9Y3I0 AL162725.1-201ENST00000435405 301 ntBASIC4.2□□□□□ -1.74
RTCBQ9Y3I0 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.2□□□□□ -1.74
RTCBQ9Y3I0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RTCBQ9Y3I0 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.2□□□□□ -1.74
RTCBQ9Y3I0 AP002001.1-203ENST00000534002 267 ntBASIC4.2□□□□□ -1.74
RTCBQ9Y3I0 MIR3923-201ENST00000579521 83 ntBASIC4.2□□□□□ -1.74
RTCBQ9Y3I0 AC020914.4-201ENST00000597690 277 ntBASIC4.2□□□□□ -1.74
RTCBQ9Y3I0 AL110115.1-201ENST00000614396 364 ntBASIC4.2□□□□□ -1.74
RTCBQ9Y3I0 AC073308.1-201ENST00000623696 305 ntBASIC4.2□□□□□ -1.74
RTCBQ9Y3I0 AC018692.3-201ENST00000623929 123 ntBASIC4.2□□□□□ -1.74
RTCBQ9Y3I0 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.2□□□□□ -1.74
RTCBQ9Y3I0 FAM35DP-201ENST00000323387 2712 ntBASIC4.2□□□□□ -1.74
RTCBQ9Y3I0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RTCBQ9Y3I0 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RTCBQ9Y3I0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RTCBQ9Y3I0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RTCBQ9Y3I0 RNU6-1290P-201ENST00000362957 109 ntBASIC4.19□□□□□ -1.74
RTCBQ9Y3I0 Y_RNA.182-201ENST00000363880 111 ntBASIC4.19□□□□□ -1.74
RTCBQ9Y3I0 RNU4-84P-201ENST00000364200 139 ntBASIC4.19□□□□□ -1.74
RTCBQ9Y3I0 Y_RNA.329-201ENST00000365209 107 ntBASIC4.19□□□□□ -1.74
RTCBQ9Y3I0 AC096649.2-201ENST00000416186 393 ntBASIC4.19□□□□□ -1.74
RTCBQ9Y3I0 CYCSP48-201ENST00000417124 323 ntBASIC4.19□□□□□ -1.74
RTCBQ9Y3I0 AL353705.1-201ENST00000433468 480 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms