Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 MTND1P17-201ENST00000448961 204 ntBASIC2.11□□□□□ -2.07
CPSF2Q9P2I0 OR2AQ1P-201ENST00000451972 200 ntBASIC2.11□□□□□ -2.07
CPSF2Q9P2I0 RNA5SP200-201ENST00000516360 103 ntBASIC2.11□□□□□ -2.07
CPSF2Q9P2I0 RNA5SP454-201ENST00000517231 127 ntBASIC2.11□□□□□ -2.07
CPSF2Q9P2I0 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.11□□□□□ -2.07
CPSF2Q9P2I0 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.11□□□□□ -2.07
CPSF2Q9P2I0 AF235103.2-201ENST00000525753 346 ntBASIC2.11□□□□□ -2.07
CPSF2Q9P2I0 AC087441.2-201ENST00000529141 262 ntBASIC2.11□□□□□ -2.07
CPSF2Q9P2I0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.11□□□□□ -2.07
CPSF2Q9P2I0 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.11□□□□□ -2.07
CPSF2Q9P2I0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.11□□□□□ -2.07
CPSF2Q9P2I0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.11□□□□□ -2.07
CPSF2Q9P2I0 MIR3162-201ENST00000581818 82 ntBASIC2.11□□□□□ -2.07
CPSF2Q9P2I0 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.11□□□□□ -2.07
CPSF2Q9P2I0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.11□□□□□ -2.07
CPSF2Q9P2I0 AC019193.3-201ENST00000609144 554 ntBASIC2.11□□□□□ -2.07
CPSF2Q9P2I0 AL590240.4-201ENST00000616908 390 ntBASIC2.11□□□□□ -2.07
CPSF2Q9P2I0 AC009248.2-201ENST00000619826 254 ntBASIC2.11□□□□□ -2.07
CPSF2Q9P2I0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CPSF2Q9P2I0 LINC02555-201ENST00000563933 1951 ntBASIC2.1□□□□□ -2.07
CPSF2Q9P2I0 MIR340-201ENST00000362125 95 ntBASIC2.1□□□□□ -2.07
CPSF2Q9P2I0 RNU6-23P-201ENST00000363283 107 ntBASIC2.1□□□□□ -2.07
CPSF2Q9P2I0 SNORD114-6-201ENST00000364393 72 ntBASIC2.1□□□□□ -2.07
CPSF2Q9P2I0 SNORD31B-201ENST00000364977 69 ntBASIC2.1□□□□□ -2.07
CPSF2Q9P2I0 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CPSF2Q9P2I0 Y_RNA.510-201ENST00000384511 114 ntBASIC2.1□□□□□ -2.07
CPSF2Q9P2I0 SUMO2P12-201ENST00000405924 140 ntBASIC2.1□□□□□ -2.07
CPSF2Q9P2I0 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.1□□□□□ -2.07
CPSF2Q9P2I0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.1□□□□□ -2.07
CPSF2Q9P2I0 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.1□□□□□ -2.07
CPSF2Q9P2I0 SNRPEP8-201ENST00000442866 260 ntBASIC2.1□□□□□ -2.07
CPSF2Q9P2I0 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.1□□□□□ -2.07
CPSF2Q9P2I0 AL049873.1-201ENST00000480540 376 ntBASIC2.1□□□□□ -2.07
CPSF2Q9P2I0 RPL23AP75-201ENST00000491601 451 ntBASIC2.1□□□□□ -2.07
CPSF2Q9P2I0 ACA59.1-201ENST00000515966 143 ntBASIC2.1□□□□□ -2.07
CPSF2Q9P2I0 RNU6-566P-201ENST00000516790 107 ntBASIC2.1□□□□□ -2.07
CPSF2Q9P2I0 MTND4LP26-201ENST00000518144 282 ntBASIC2.1□□□□□ -2.07
CPSF2Q9P2I0 MIR3169-201ENST00000578032 83 ntBASIC2.1□□□□□ -2.07
CPSF2Q9P2I0 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.1□□□□□ -2.07
CPSF2Q9P2I0 AL022345.1-201ENST00000607292 135 ntBASIC2.1□□□□□ -2.07
CPSF2Q9P2I0 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.1□□□□□ -2.07
CPSF2Q9P2I0 U6atac.1-201ENST00000616025 117 ntBASIC2.1□□□□□ -2.07
CPSF2Q9P2I0 AC005562.2-201ENST00000618264 111 ntBASIC2.1□□□□□ -2.07
CPSF2Q9P2I0 AC130454.1-201ENST00000622948 401 ntBASIC2.1□□□□□ -2.07
CPSF2Q9P2I0 SCARNA4-201ENST00000629045 128 ntBASIC2.1□□□□□ -2.07
CPSF2Q9P2I0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CPSF2Q9P2I0 MTND5P6-201ENST00000422338 1798 ntBASIC2.09□□□□□ -2.07
CPSF2Q9P2I0 RNA5SP493-201ENST00000364115 91 ntBASIC2.09□□□□□ -2.07
CPSF2Q9P2I0 Y_RNA.301-201ENST00000364990 103 ntBASIC2.09□□□□□ -2.07
CPSF2Q9P2I0 RNU6-438P-201ENST00000365561 103 ntBASIC2.09□□□□□ -2.07
CPSF2Q9P2I0 MIR549A-201ENST00000385268 96 ntBASIC2.09□□□□□ -2.07
CPSF2Q9P2I0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CPSF2Q9P2I0 SNORA48.3-201ENST00000391081 134 ntBASIC2.09□□□□□ -2.07
CPSF2Q9P2I0 RPL31P63-201ENST00000422565 375 ntBASIC2.09□□□□□ -2.07
CPSF2Q9P2I0 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.09□□□□□ -2.07
CPSF2Q9P2I0 AC016925.1-201ENST00000458303 298 ntBASIC2.09□□□□□ -2.07
CPSF2Q9P2I0 RPS23P5-201ENST00000495419 428 ntBASIC2.09□□□□□ -2.07
CPSF2Q9P2I0 RNU6-358P-201ENST00000516564 75 ntBASIC2.09□□□□□ -2.07
CPSF2Q9P2I0 SCARNA16.3-201ENST00000516595 184 ntBASIC2.09□□□□□ -2.07
CPSF2Q9P2I0 AC026470.2-201ENST00000561492 181 ntBASIC2.09□□□□□ -2.07
CPSF2Q9P2I0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.09□□□□□ -2.07
CPSF2Q9P2I0 MIR4513-201ENST00000581077 86 ntBASIC2.09□□□□□ -2.07
CPSF2Q9P2I0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.09□□□□□ -2.07
CPSF2Q9P2I0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.09□□□□□ -2.07
CPSF2Q9P2I0 BNIP3P10-201ENST00000605360 577 ntBASIC2.09□□□□□ -2.07
CPSF2Q9P2I0 AC092794.1-201ENST00000612734 582 ntBASIC2.09□□□□□ -2.07
CPSF2Q9P2I0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.09□□□□□ -2.07
CPSF2Q9P2I0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
CPSF2Q9P2I0 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.08□□□□□ -2.08
CPSF2Q9P2I0 U8.10-201ENST00000384260 133 ntBASIC2.08□□□□□ -2.08
CPSF2Q9P2I0 RNU6-1026P-201ENST00000384465 108 ntBASIC2.08□□□□□ -2.08
CPSF2Q9P2I0 MIR487A-201ENST00000385009 80 ntBASIC2.08□□□□□ -2.08
CPSF2Q9P2I0 AL158823.1-201ENST00000418441 478 ntBASIC2.08□□□□□ -2.08
CPSF2Q9P2I0 EIF4EP2-201ENST00000422816 654 ntBASIC2.08□□□□□ -2.08
CPSF2Q9P2I0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.08□□□□□ -2.08
CPSF2Q9P2I0 AC139712.2-201ENST00000424302 339 ntBASIC2.08□□□□□ -2.08
CPSF2Q9P2I0 AL035666.1-201ENST00000446195 348 ntBASIC2.08□□□□□ -2.08
CPSF2Q9P2I0 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.08□□□□□ -2.08
CPSF2Q9P2I0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CPSF2Q9P2I0 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.08□□□□□ -2.08
CPSF2Q9P2I0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.08□□□□□ -2.08
CPSF2Q9P2I0 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.08□□□□□ -2.08
CPSF2Q9P2I0 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.08□□□□□ -2.08
CPSF2Q9P2I0 MIR4742-201ENST00000581069 85 ntBASIC2.08□□□□□ -2.08
CPSF2Q9P2I0 AL356776.1-201ENST00000406574 447 ntBASIC2.07□□□□□ -2.08
CPSF2Q9P2I0 SNORA11.4-201ENST00000408823 129 ntBASIC2.07□□□□□ -2.08
CPSF2Q9P2I0 RNA5SP501-201ENST00000410990 112 ntBASIC2.07□□□□□ -2.08
CPSF2Q9P2I0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.07□□□□□ -2.08
CPSF2Q9P2I0 RNU1-131P-201ENST00000458943 161 ntBASIC2.07□□□□□ -2.08
CPSF2Q9P2I0 RNU6-329P-201ENST00000459618 107 ntBASIC2.07□□□□□ -2.08
CPSF2Q9P2I0 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.07□□□□□ -2.08
CPSF2Q9P2I0 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.07□□□□□ -2.08
CPSF2Q9P2I0 AC026464.5-201ENST00000562497 722 ntBASIC2.07□□□□□ -2.08
CPSF2Q9P2I0 MIR4790-201ENST00000577799 79 ntBASIC2.07□□□□□ -2.08
CPSF2Q9P2I0 CYP2C61P-201ENST00000604072 290 ntBASIC2.07□□□□□ -2.08
CPSF2Q9P2I0 AC122108.2-201ENST00000611946 526 ntBASIC2.07□□□□□ -2.08
CPSF2Q9P2I0 AL773524.1-201ENST00000614065 229 ntBASIC2.07□□□□□ -2.08
CPSF2Q9P2I0 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.07□□□□□ -2.08
CPSF2Q9P2I0 MIR6873-201ENST00000622788 63 ntBASIC2.07□□□□□ -2.08
CPSF2Q9P2I0 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms