Protein–RNA interactions for Protein: Q9P1Z9

CCDC180, Coiled-coil domain-containing protein 180, humanhuman

Predictions only

Length 1,646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180Q9P1Z9 Y_RNA.203-201ENST00000364106 102 ntBASIC-1.05□□□□□ -2.58
CCDC180Q9P1Z9 RNU6-878P-201ENST00000384578 110 ntBASIC-1.05□□□□□ -2.58
CCDC180Q9P1Z9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-1.05□□□□□ -2.58
CCDC180Q9P1Z9 AL592310.1-201ENST00000414330 671 ntBASIC-1.05□□□□□ -2.58
CCDC180Q9P1Z9 MTCO3P1-205ENST00000422088 832 ntBASIC-1.05□□□□□ -2.58
CCDC180Q9P1Z9 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC-1.05□□□□□ -2.58
CCDC180Q9P1Z9 STAG3L5P-204ENST00000443759 179 ntBASIC-1.05□□□□□ -2.58
CCDC180Q9P1Z9 AL353752.1-201ENST00000454946 260 ntBASIC-1.05□□□□□ -2.58
CCDC180Q9P1Z9 TPRKBP2-201ENST00000565969 475 ntBASIC-1.05□□□□□ -2.58
CCDC180Q9P1Z9 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-1.05□□□□□ -2.58
CCDC180Q9P1Z9 AL158211.4-201ENST00000606988 584 ntBASIC-1.05□□□□□ -2.58
CCDC180Q9P1Z9 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC-1.05□□□□□ -2.58
CCDC180Q9P1Z9 RNU6-655P-201ENST00000362858 107 ntBASIC-1.06□□□□□ -2.58
CCDC180Q9P1Z9 RNU6-167P-201ENST00000384292 106 ntBASIC-1.06□□□□□ -2.58
CCDC180Q9P1Z9 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.06□□□□□ -2.58
CCDC180Q9P1Z9 RNU6-480P-201ENST00000384332 107 ntBASIC-1.06□□□□□ -2.58
CCDC180Q9P1Z9 SNORD83B-201ENST00000386745 93 ntBASIC-1.06□□□□□ -2.58
CCDC180Q9P1Z9 RNU4-27P-201ENST00000410889 139 ntBASIC-1.06□□□□□ -2.58
CCDC180Q9P1Z9 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-1.06□□□□□ -2.58
CCDC180Q9P1Z9 MRPL42P4-201ENST00000453267 443 ntBASIC-1.06□□□□□ -2.58
CCDC180Q9P1Z9 MED28P2-201ENST00000475771 317 ntBASIC-1.06□□□□□ -2.58
CCDC180Q9P1Z9 SCARNA17-201ENST00000516183 144 ntBASIC-1.06□□□□□ -2.58
CCDC180Q9P1Z9 AC023827.1-201ENST00000569247 97 ntBASIC-1.06□□□□□ -2.58
CCDC180Q9P1Z9 AC093788.1-201ENST00000609356 927 ntBASIC-1.06□□□□□ -2.58
CCDC180Q9P1Z9 AC106754.2-201ENST00000623006 233 ntBASIC-1.06□□□□□ -2.58
CCDC180Q9P1Z9 RNU6-652P-201ENST00000365488 107 ntBASIC-1.07□□□□□ -2.58
CCDC180Q9P1Z9 SNORD111-201ENST00000408139 94 ntBASIC-1.07□□□□□ -2.58
CCDC180Q9P1Z9 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-1.07□□□□□ -2.58
CCDC180Q9P1Z9 RNU6-848P-201ENST00000515948 107 ntBASIC-1.07□□□□□ -2.58
CCDC180Q9P1Z9 RNU6-617P-201ENST00000516147 107 ntBASIC-1.07□□□□□ -2.58
CCDC180Q9P1Z9 RNU6-473P-201ENST00000516164 107 ntBASIC-1.07□□□□□ -2.58
CCDC180Q9P1Z9 RNU6-1049P-201ENST00000516414 107 ntBASIC-1.07□□□□□ -2.58
CCDC180Q9P1Z9 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-1.07□□□□□ -2.58
CCDC180Q9P1Z9 SEPT14P17-201ENST00000617978 177 ntBASIC-1.07□□□□□ -2.58
CCDC180Q9P1Z9 snoU2_19.1-201ENST00000362361 80 ntBASIC-1.07□□□□□ -2.58
CCDC180Q9P1Z9 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC-1.07□□□□□ -2.58
CCDC180Q9P1Z9 AC109327.2-201ENST00000448339 378 ntBASIC-1.07□□□□□ -2.58
CCDC180Q9P1Z9 SCARNA18-201ENST00000459004 134 ntBASIC-1.07□□□□□ -2.58
CCDC180Q9P1Z9 AC107297.1-201ENST00000459991 176 ntBASIC-1.07□□□□□ -2.58
CCDC180Q9P1Z9 MTCO3P28-201ENST00000513351 515 ntBASIC-1.07□□□□□ -2.58
CCDC180Q9P1Z9 AP002001.1-203ENST00000534002 267 ntBASIC-1.07□□□□□ -2.58
CCDC180Q9P1Z9 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-1.07□□□□□ -2.58
CCDC180Q9P1Z9 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-1.07□□□□□ -2.58
CCDC180Q9P1Z9 AC063943.3-201ENST00000615562 356 ntBASIC-1.07□□□□□ -2.58
CCDC180Q9P1Z9 MIR6079-201ENST00000635807 62 ntBASIC-1.07□□□□□ -2.58
CCDC180Q9P1Z9 Y_RNA.423-201ENST00000384057 113 ntBASIC-1.08□□□□□ -2.58
CCDC180Q9P1Z9 AC245047.8-201ENST00000456455 284 ntBASIC-1.08□□□□□ -2.58
CCDC180Q9P1Z9 AC013828.1-201ENST00000481845 158 ntBASIC-1.08□□□□□ -2.58
CCDC180Q9P1Z9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-1.08□□□□□ -2.58
CCDC180Q9P1Z9 RNU1-86P-201ENST00000516108 154 ntBASIC-1.08□□□□□ -2.58
CCDC180Q9P1Z9 RNU1-107P-201ENST00000516617 154 ntBASIC-1.08□□□□□ -2.58
CCDC180Q9P1Z9 SNORA27.4-201ENST00000516650 95 ntBASIC-1.08□□□□□ -2.58
CCDC180Q9P1Z9 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-1.08□□□□□ -2.58
CCDC180Q9P1Z9 AC090049.2-201ENST00000550377 109 ntBASIC-1.08□□□□□ -2.58
CCDC180Q9P1Z9 MIR378F-201ENST00000578143 78 ntBASIC-1.08□□□□□ -2.58
CCDC180Q9P1Z9 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-1.08□□□□□ -2.58
CCDC180Q9P1Z9 RNU4-30P-201ENST00000410245 143 ntBASIC-1.09□□□□□ -2.58
CCDC180Q9P1Z9 SNORD83.1-201ENST00000411362 77 ntBASIC-1.09□□□□□ -2.58
CCDC180Q9P1Z9 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-1.09□□□□□ -2.58
CCDC180Q9P1Z9 GPM6BP2-201ENST00000432046 144 ntBASIC-1.09□□□□□ -2.58
CCDC180Q9P1Z9 RPS15AP10-201ENST00000432472 382 ntBASIC-1.09□□□□□ -2.58
CCDC180Q9P1Z9 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-1.09□□□□□ -2.58
CCDC180Q9P1Z9 USP9YP22-201ENST00000438971 294 ntBASIC-1.09□□□□□ -2.58
CCDC180Q9P1Z9 GPM6BP1-201ENST00000446387 144 ntBASIC-1.09□□□□□ -2.58
CCDC180Q9P1Z9 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-1.09□□□□□ -2.58
CCDC180Q9P1Z9 AC068790.2-201ENST00000602601 557 ntBASIC-1.09□□□□□ -2.58
CCDC180Q9P1Z9 SNORA12.1-201ENST00000390873 148 ntBASIC-1.1□□□□□ -2.59
CCDC180Q9P1Z9 RNA5SP163-201ENST00000410304 99 ntBASIC-1.1□□□□□ -2.59
CCDC180Q9P1Z9 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-1.1□□□□□ -2.59
CCDC180Q9P1Z9 RNU7-34P-201ENST00000459394 64 ntBASIC-1.1□□□□□ -2.59
CCDC180Q9P1Z9 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-1.1□□□□□ -2.59
CCDC180Q9P1Z9 MIR4782-201ENST00000577987 79 ntBASIC-1.1□□□□□ -2.59
CCDC180Q9P1Z9 AC004223.2-201ENST00000590309 544 ntBASIC-1.1□□□□□ -2.59
CCDC180Q9P1Z9 AC018462.2-201ENST00000605375 395 ntBASIC-1.1□□□□□ -2.59
CCDC180Q9P1Z9 U6.99-201ENST00000637524 83 ntBASIC-1.1□□□□□ -2.59
CCDC180Q9P1Z9 MIR3529-201ENST00000637713 78 ntBASIC-1.1□□□□□ -2.59
CCDC180Q9P1Z9 AC112487.2-201ENST00000637950 304 ntBASIC-1.1□□□□□ -2.59
CCDC180Q9P1Z9 RNA5SP192-201ENST00000364404 120 ntBASIC-1.11□□□□□ -2.59
CCDC180Q9P1Z9 SNORD114-3-201ENST00000364969 75 ntBASIC-1.11□□□□□ -2.59
CCDC180Q9P1Z9 MIR573-201ENST00000384964 99 ntBASIC-1.11□□□□□ -2.59
CCDC180Q9P1Z9 AL953862.1-201ENST00000423016 168 ntBASIC-1.11□□□□□ -2.59
CCDC180Q9P1Z9 TMSB4XP1-201ENST00000424567 135 ntBASIC-1.11□□□□□ -2.59
CCDC180Q9P1Z9 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-1.11□□□□□ -2.59
CCDC180Q9P1Z9 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.11□□□□□ -2.59
CCDC180Q9P1Z9 AC093519.1-201ENST00000566109 298 ntBASIC-1.11□□□□□ -2.59
CCDC180Q9P1Z9 MIR499B-201ENST00000636498 73 ntBASIC-1.11□□□□□ -2.59
CCDC180Q9P1Z9 AC083799.1-201ENST00000366451 910 ntBASIC-1.11□□□□□ -2.59
CCDC180Q9P1Z9 Y_RNA.498-201ENST00000384460 102 ntBASIC-1.11□□□□□ -2.59
CCDC180Q9P1Z9 AL603865.2-201ENST00000401679 213 ntBASIC-1.11□□□□□ -2.59
CCDC180Q9P1Z9 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-1.11□□□□□ -2.59
CCDC180Q9P1Z9 AC091885.1-201ENST00000506658 268 ntBASIC-1.11□□□□□ -2.59
CCDC180Q9P1Z9 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-1.11□□□□□ -2.59
CCDC180Q9P1Z9 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.11□□□□□ -2.59
CCDC180Q9P1Z9 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-1.11□□□□□ -2.59
CCDC180Q9P1Z9 MIR1-1-201ENST00000362147 71 ntBASIC-1.12□□□□□ -2.59
CCDC180Q9P1Z9 SNORD114-14-201ENST00000362723 75 ntBASIC-1.12□□□□□ -2.59
CCDC180Q9P1Z9 RNU6-505P-201ENST00000384427 107 ntBASIC-1.12□□□□□ -2.59
CCDC180Q9P1Z9 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-1.12□□□□□ -2.59
CCDC180Q9P1Z9 AL353997.1-201ENST00000432936 108 ntBASIC-1.12□□□□□ -2.59
CCDC180Q9P1Z9 AL163973.1-201ENST00000484753 577 ntBASIC-1.12□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms