Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
VAPAQ9P0L0 MTND3P17-201ENST00000416968 344 ntBASIC0.86□□□□□ -2.27
VAPAQ9P0L0 AC009961.2-201ENST00000435771 251 ntBASIC0.86□□□□□ -2.27
VAPAQ9P0L0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.86□□□□□ -2.27
VAPAQ9P0L0 RPS23P4-201ENST00000487908 423 ntBASIC0.86□□□□□ -2.27
VAPAQ9P0L0 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.86□□□□□ -2.27
VAPAQ9P0L0 SNORD116-28-201ENST00000516123 91 ntBASIC0.86□□□□□ -2.27
VAPAQ9P0L0 AC069113.1-201ENST00000517763 267 ntBASIC0.86□□□□□ -2.27
VAPAQ9P0L0 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.86□□□□□ -2.27
VAPAQ9P0L0 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.86□□□□□ -2.27
VAPAQ9P0L0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.86□□□□□ -2.27
VAPAQ9P0L0 AC080078.3-201ENST00000605407 463 ntBASIC0.86□□□□□ -2.27
VAPAQ9P0L0 uc_338.11-201ENST00000619132 160 ntBASIC0.86□□□□□ -2.27
VAPAQ9P0L0 MIR378A-201ENST00000362177 66 ntBASIC0.85□□□□□ -2.27
VAPAQ9P0L0 RNU6-1123P-201ENST00000362347 106 ntBASIC0.85□□□□□ -2.27
VAPAQ9P0L0 snoU2-30.2-201ENST00000362805 70 ntBASIC0.85□□□□□ -2.27
VAPAQ9P0L0 RNA5SP99-201ENST00000364020 114 ntBASIC0.85□□□□□ -2.27
VAPAQ9P0L0 RNU6-534P-201ENST00000364877 106 ntBASIC0.85□□□□□ -2.27
VAPAQ9P0L0 RNU4-48P-201ENST00000365559 182 ntBASIC0.85□□□□□ -2.27
VAPAQ9P0L0 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.85□□□□□ -2.27
VAPAQ9P0L0 Z99497.1-201ENST00000421282 135 ntBASIC0.85□□□□□ -2.27
VAPAQ9P0L0 HMGN2P34-201ENST00000437647 269 ntBASIC0.85□□□□□ -2.27
VAPAQ9P0L0 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.85□□□□□ -2.27
VAPAQ9P0L0 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
VAPAQ9P0L0 HSFY5P-201ENST00000453726 309 ntBASIC0.85□□□□□ -2.27
VAPAQ9P0L0 AC005178.1-201ENST00000508392 440 ntBASIC0.85□□□□□ -2.27
VAPAQ9P0L0 RNU6-948P-201ENST00000516374 107 ntBASIC0.85□□□□□ -2.27
VAPAQ9P0L0 RN7SKP219-201ENST00000516825 296 ntBASIC0.85□□□□□ -2.27
VAPAQ9P0L0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.85□□□□□ -2.27
VAPAQ9P0L0 AC109446.2-201ENST00000567872 497 ntBASIC0.85□□□□□ -2.27
VAPAQ9P0L0 MIR4742-201ENST00000581069 85 ntBASIC0.85□□□□□ -2.27
VAPAQ9P0L0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.85□□□□□ -2.27
VAPAQ9P0L0 AL391646.1-201ENST00000603860 190 ntBASIC0.85□□□□□ -2.27
VAPAQ9P0L0 RNU6-85P-201ENST00000605989 107 ntBASIC0.85□□□□□ -2.27
VAPAQ9P0L0 AC092354.1-201ENST00000606057 376 ntBASIC0.85□□□□□ -2.27
VAPAQ9P0L0 AC005562.2-201ENST00000618264 111 ntBASIC0.85□□□□□ -2.27
VAPAQ9P0L0 AL603839.4-201ENST00000624658 1005 ntBASIC0.85□□□□□ -2.27
VAPAQ9P0L0 AC009541.1-201ENST00000438279 2662 ntBASIC0.85□□□□□ -2.27
VAPAQ9P0L0 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.84□□□□□ -2.27
VAPAQ9P0L0 AL391987.6-201ENST00000305671 199 ntBASIC0.84□□□□□ -2.27
VAPAQ9P0L0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
VAPAQ9P0L0 RNU6-53P-201ENST00000365367 106 ntBASIC0.84□□□□□ -2.27
VAPAQ9P0L0 RNU6-417P-201ENST00000384712 107 ntBASIC0.84□□□□□ -2.27
VAPAQ9P0L0 SNORA40.3-201ENST00000390964 122 ntBASIC0.84□□□□□ -2.27
VAPAQ9P0L0 RNA5SP109-201ENST00000391010 116 ntBASIC0.84□□□□□ -2.27
VAPAQ9P0L0 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.84□□□□□ -2.27
VAPAQ9P0L0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.84□□□□□ -2.27
VAPAQ9P0L0 RPS27P1-201ENST00000450552 247 ntBASIC0.84□□□□□ -2.27
VAPAQ9P0L0 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.84□□□□□ -2.27
VAPAQ9P0L0 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.84□□□□□ -2.27
VAPAQ9P0L0 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.84□□□□□ -2.27
VAPAQ9P0L0 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.84□□□□□ -2.27
VAPAQ9P0L0 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.84□□□□□ -2.27
VAPAQ9P0L0 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.84□□□□□ -2.27
VAPAQ9P0L0 AL929325.1-201ENST00000603096 117 ntBASIC0.84□□□□□ -2.27
VAPAQ9P0L0 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.84□□□□□ -2.27
VAPAQ9P0L0 AC005858.4-201ENST00000623191 700 ntBASIC0.84□□□□□ -2.27
VAPAQ9P0L0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
VAPAQ9P0L0 RNU6-456P-201ENST00000384493 107 ntBASIC0.83□□□□□ -2.28
VAPAQ9P0L0 RPL21P1-201ENST00000399532 476 ntBASIC0.83□□□□□ -2.28
VAPAQ9P0L0 HMGN1P14-201ENST00000412459 517 ntBASIC0.83□□□□□ -2.28
VAPAQ9P0L0 MTATP6P19-201ENST00000413797 659 ntBASIC0.83□□□□□ -2.28
VAPAQ9P0L0 AC010099.3-201ENST00000423896 409 ntBASIC0.83□□□□□ -2.28
VAPAQ9P0L0 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.83□□□□□ -2.28
VAPAQ9P0L0 AC004386.2-201ENST00000441858 148 ntBASIC0.83□□□□□ -2.28
VAPAQ9P0L0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.83□□□□□ -2.28
VAPAQ9P0L0 SNORA70.22-201ENST00000517160 124 ntBASIC0.83□□□□□ -2.28
VAPAQ9P0L0 RNU6-165P-201ENST00000517170 99 ntBASIC0.83□□□□□ -2.28
VAPAQ9P0L0 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.83□□□□□ -2.28
VAPAQ9P0L0 AC136932.1-201ENST00000574771 208 ntBASIC0.83□□□□□ -2.28
VAPAQ9P0L0 MIR5006-201ENST00000583027 110 ntBASIC0.83□□□□□ -2.28
VAPAQ9P0L0 Z99497.2-201ENST00000603634 310 ntBASIC0.83□□□□□ -2.28
VAPAQ9P0L0 AC104458.1-201ENST00000608243 463 ntBASIC0.83□□□□□ -2.28
VAPAQ9P0L0 AC009509.4-201ENST00000619202 509 ntBASIC0.83□□□□□ -2.28
VAPAQ9P0L0 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.83□□□□□ -2.28
VAPAQ9P0L0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.83□□□□□ -2.28
VAPAQ9P0L0 AC006001.4-201ENST00000622243 395 ntBASIC0.83□□□□□ -2.28
VAPAQ9P0L0 RNU6-975P-201ENST00000384296 105 ntBASIC0.82□□□□□ -2.28
VAPAQ9P0L0 RNU6-1235P-201ENST00000384559 107 ntBASIC0.82□□□□□ -2.28
VAPAQ9P0L0 MIR515-2-201ENST00000384883 83 ntBASIC0.82□□□□□ -2.28
VAPAQ9P0L0 MIR515-1-201ENST00000384884 83 ntBASIC0.82□□□□□ -2.28
VAPAQ9P0L0 RNA5SP323-201ENST00000391094 133 ntBASIC0.82□□□□□ -2.28
VAPAQ9P0L0 AC010154.1-201ENST00000425857 269 ntBASIC0.82□□□□□ -2.28
VAPAQ9P0L0 AL033528.1-201ENST00000453780 140 ntBASIC0.82□□□□□ -2.28
VAPAQ9P0L0 RNU6-498P-201ENST00000459468 107 ntBASIC0.82□□□□□ -2.28
VAPAQ9P0L0 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.82□□□□□ -2.28
VAPAQ9P0L0 RPL39P5-202ENST00000512505 151 ntBASIC0.82□□□□□ -2.28
VAPAQ9P0L0 RNU6-1146P-201ENST00000516282 102 ntBASIC0.82□□□□□ -2.28
VAPAQ9P0L0 SCARNA1-201ENST00000517138 166 ntBASIC0.82□□□□□ -2.28
VAPAQ9P0L0 MTCO3P23-201ENST00000561363 289 ntBASIC0.82□□□□□ -2.28
VAPAQ9P0L0 TPRKBP2-201ENST00000565969 475 ntBASIC0.82□□□□□ -2.28
VAPAQ9P0L0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.82□□□□□ -2.28
VAPAQ9P0L0 AC008088.1-201ENST00000580993 280 ntBASIC0.82□□□□□ -2.28
VAPAQ9P0L0 AC016727.2-201ENST00000603988 621 ntBASIC0.82□□□□□ -2.28
VAPAQ9P0L0 AC021506.2-201ENST00000612354 169 ntBASIC0.82□□□□□ -2.28
VAPAQ9P0L0 AC016597.2-201ENST00000613256 341 ntBASIC0.82□□□□□ -2.28
VAPAQ9P0L0 AP001506.1-201ENST00000615444 211 ntBASIC0.82□□□□□ -2.28
VAPAQ9P0L0 Y_RNA.140-201ENST00000363474 103 ntBASIC0.81□□□□□ -2.28
VAPAQ9P0L0 MIR549A-201ENST00000385268 96 ntBASIC0.81□□□□□ -2.28
VAPAQ9P0L0 RNA5SP467-201ENST00000391274 118 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms