Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 Y_RNA.551-201ENST00000384661 102 ntBASIC2.98□□□□□ -1.93
MKS1Q9NXB0 MIR490-201ENST00000384865 128 ntBASIC2.98□□□□□ -1.93
MKS1Q9NXB0 MIR449B-201ENST00000384995 97 ntBASIC2.98□□□□□ -1.93
MKS1Q9NXB0 SNORD67-201ENST00000390833 111 ntBASIC2.98□□□□□ -1.93
MKS1Q9NXB0 RN7SKP27-201ENST00000410684 333 ntBASIC2.98□□□□□ -1.93
MKS1Q9NXB0 AC004866.1-201ENST00000411748 78 ntBASIC2.98□□□□□ -1.93
MKS1Q9NXB0 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.98□□□□□ -1.93
MKS1Q9NXB0 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.98□□□□□ -1.93
MKS1Q9NXB0 SDAD1P3-201ENST00000427380 333 ntBASIC2.98□□□□□ -1.93
MKS1Q9NXB0 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.98□□□□□ -1.93
MKS1Q9NXB0 RN7SL863P-201ENST00000462370 296 ntBASIC2.98□□□□□ -1.93
MKS1Q9NXB0 RPS29P2-201ENST00000479278 136 ntBASIC2.98□□□□□ -1.93
MKS1Q9NXB0 RNU6-1012P-201ENST00000516606 109 ntBASIC2.98□□□□□ -1.93
MKS1Q9NXB0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.98□□□□□ -1.93
MKS1Q9NXB0 MIR5006-201ENST00000583027 110 ntBASIC2.98□□□□□ -1.93
MKS1Q9NXB0 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.98□□□□□ -1.93
MKS1Q9NXB0 AL355297.3-201ENST00000604082 446 ntBASIC2.98□□□□□ -1.93
MKS1Q9NXB0 AL355297.2-201ENST00000604792 129 ntBASIC2.98□□□□□ -1.93
MKS1Q9NXB0 AL121655.1-201ENST00000605811 308 ntBASIC2.98□□□□□ -1.93
MKS1Q9NXB0 AC107871.2-201ENST00000612894 502 ntBASIC2.98□□□□□ -1.93
MKS1Q9NXB0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
MKS1Q9NXB0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
MKS1Q9NXB0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
MKS1Q9NXB0 RNU1-23P-201ENST00000363361 144 ntBASIC2.97□□□□□ -1.93
MKS1Q9NXB0 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.97□□□□□ -1.93
MKS1Q9NXB0 RNU6-793P-201ENST00000384233 104 ntBASIC2.97□□□□□ -1.93
MKS1Q9NXB0 SNORD78.2-201ENST00000391076 69 ntBASIC2.97□□□□□ -1.93
MKS1Q9NXB0 SNORD12B-201ENST00000410433 91 ntBASIC2.97□□□□□ -1.93
MKS1Q9NXB0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.97□□□□□ -1.93
MKS1Q9NXB0 AC009237.7-201ENST00000447357 229 ntBASIC2.97□□□□□ -1.93
MKS1Q9NXB0 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.97□□□□□ -1.93
MKS1Q9NXB0 AC091179.3-201ENST00000474761 144 ntBASIC2.97□□□□□ -1.93
MKS1Q9NXB0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.97□□□□□ -1.93
MKS1Q9NXB0 MIR449C-201ENST00000516047 92 ntBASIC2.97□□□□□ -1.93
MKS1Q9NXB0 Y_RNA.683-201ENST00000516508 93 ntBASIC2.97□□□□□ -1.93
MKS1Q9NXB0 RNU6-1046P-201ENST00000516538 107 ntBASIC2.97□□□□□ -1.93
MKS1Q9NXB0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.97□□□□□ -1.93
MKS1Q9NXB0 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.97□□□□□ -1.93
MKS1Q9NXB0 MIR1254-2-201ENST00000579553 63 ntBASIC2.97□□□□□ -1.93
MKS1Q9NXB0 MZT1P2-201ENST00000604387 248 ntBASIC2.97□□□□□ -1.93
MKS1Q9NXB0 AL021879.1-201ENST00000611756 288 ntBASIC2.97□□□□□ -1.93
MKS1Q9NXB0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.97□□□□□ -1.93
MKS1Q9NXB0 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
MKS1Q9NXB0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
MKS1Q9NXB0 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
MKS1Q9NXB0 MTND5P35-201ENST00000557537 1720 ntBASIC2.96□□□□□ -1.93
MKS1Q9NXB0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.96□□□□□ -1.94
MKS1Q9NXB0 RNU6-546P-201ENST00000383991 107 ntBASIC2.96□□□□□ -1.94
MKS1Q9NXB0 Y_RNA.458-201ENST00000384240 102 ntBASIC2.96□□□□□ -1.94
MKS1Q9NXB0 Y_RNA.471-201ENST00000384312 102 ntBASIC2.96□□□□□ -1.94
MKS1Q9NXB0 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
MKS1Q9NXB0 AL139095.1-201ENST00000404326 391 ntBASIC2.96□□□□□ -1.94
MKS1Q9NXB0 RNU4-47P-201ENST00000410876 114 ntBASIC2.96□□□□□ -1.94
MKS1Q9NXB0 RNU2-32P-201ENST00000411193 191 ntBASIC2.96□□□□□ -1.94
MKS1Q9NXB0 AC104389.3-201ENST00000445629 235 ntBASIC2.96□□□□□ -1.94
MKS1Q9NXB0 Z75741.1-201ENST00000446793 314 ntBASIC2.96□□□□□ -1.94
MKS1Q9NXB0 AC007395.1-201ENST00000451333 677 ntBASIC2.96□□□□□ -1.94
MKS1Q9NXB0 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.96□□□□□ -1.94
MKS1Q9NXB0 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.96□□□□□ -1.94
MKS1Q9NXB0 RNU6-344P-201ENST00000516635 111 ntBASIC2.96□□□□□ -1.94
MKS1Q9NXB0 AC008739.3-201ENST00000603262 127 ntBASIC2.96□□□□□ -1.94
MKS1Q9NXB0 AC090115.4-201ENST00000609970 188 ntBASIC2.96□□□□□ -1.94
MKS1Q9NXB0 AL449363.1-201ENST00000617815 186 ntBASIC2.96□□□□□ -1.94
MKS1Q9NXB0 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
MKS1Q9NXB0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.96□□□□□ -1.94
MKS1Q9NXB0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
MKS1Q9NXB0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
MKS1Q9NXB0 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.95□□□□□ -1.94
MKS1Q9NXB0 SNORA48.7-201ENST00000391302 135 ntBASIC2.95□□□□□ -1.94
MKS1Q9NXB0 AL356057.3-201ENST00000402607 340 ntBASIC2.95□□□□□ -1.94
MKS1Q9NXB0 Y_RNA.595-201ENST00000410403 105 ntBASIC2.95□□□□□ -1.94
MKS1Q9NXB0 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.95□□□□□ -1.94
MKS1Q9NXB0 DPH3P2-201ENST00000422618 250 ntBASIC2.95□□□□□ -1.94
MKS1Q9NXB0 RPEP5-201ENST00000441137 268 ntBASIC2.95□□□□□ -1.94
MKS1Q9NXB0 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.95□□□□□ -1.94
MKS1Q9NXB0 RPS23P5-201ENST00000495419 428 ntBASIC2.95□□□□□ -1.94
MKS1Q9NXB0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.95□□□□□ -1.94
MKS1Q9NXB0 RNU5F-4P-201ENST00000516581 114 ntBASIC2.95□□□□□ -1.94
MKS1Q9NXB0 RNU6-1098P-201ENST00000516772 96 ntBASIC2.95□□□□□ -1.94
MKS1Q9NXB0 CYCSP23-201ENST00000519781 313 ntBASIC2.95□□□□□ -1.94
MKS1Q9NXB0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.95□□□□□ -1.94
MKS1Q9NXB0 AC022616.8-201ENST00000533569 253 ntBASIC2.95□□□□□ -1.94
MKS1Q9NXB0 AC023824.2-201ENST00000566185 400 ntBASIC2.95□□□□□ -1.94
MKS1Q9NXB0 AL161756.2-201ENST00000604597 246 ntBASIC2.95□□□□□ -1.94
MKS1Q9NXB0 AL162730.1-201ENST00000605734 292 ntBASIC2.95□□□□□ -1.94
MKS1Q9NXB0 AC240442.1-201ENST00000616055 283 ntBASIC2.95□□□□□ -1.94
MKS1Q9NXB0 AC010205.1-201ENST00000616668 449 ntBASIC2.95□□□□□ -1.94
MKS1Q9NXB0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.95□□□□□ -1.94
MKS1Q9NXB0 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.95□□□□□ -1.94
MKS1Q9NXB0 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.95□□□□□ -1.94
MKS1Q9NXB0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.94□□□□□ -1.94
MKS1Q9NXB0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.94□□□□□ -1.94
MKS1Q9NXB0 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
MKS1Q9NXB0 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.94□□□□□ -1.94
MKS1Q9NXB0 RNU1-35P-201ENST00000362782 153 ntBASIC2.94□□□□□ -1.94
MKS1Q9NXB0 Y_RNA.152-201ENST00000363578 100 ntBASIC2.94□□□□□ -1.94
MKS1Q9NXB0 MIR548F4-201ENST00000408515 105 ntBASIC2.94□□□□□ -1.94
MKS1Q9NXB0 AL358176.2-201ENST00000425769 204 ntBASIC2.94□□□□□ -1.94
MKS1Q9NXB0 ARL5AP4-201ENST00000430731 512 ntBASIC2.94□□□□□ -1.94
MKS1Q9NXB0 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms