Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 MIR1244-1-201ENST00000612829 85 ntBASIC2.85□□□□□ -1.95
VPS45Q9NRW7 AL138825.1-201ENST00000618587 192 ntBASIC2.85□□□□□ -1.95
VPS45Q9NRW7 SNORA43.4-201ENST00000629559 138 ntBASIC2.85□□□□□ -1.95
VPS45Q9NRW7 MIR1244-3-201ENST00000635744 85 ntBASIC2.85□□□□□ -1.95
VPS45Q9NRW7 MIR1244-2-201ENST00000636449 85 ntBASIC2.85□□□□□ -1.95
VPS45Q9NRW7 MIR1244-4-202ENST00000636813 85 ntBASIC2.85□□□□□ -1.95
VPS45Q9NRW7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
VPS45Q9NRW7 AC005592.1-201ENST00000566527 1640 ntBASIC2.85□□□□□ -1.95
VPS45Q9NRW7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS45Q9NRW7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.84□□□□□ -1.95
VPS45Q9NRW7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.84□□□□□ -1.95
VPS45Q9NRW7 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
VPS45Q9NRW7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.84□□□□□ -1.95
VPS45Q9NRW7 RNU6-655P-201ENST00000362858 107 ntBASIC2.84□□□□□ -1.95
VPS45Q9NRW7 Y_RNA.405-201ENST00000383979 100 ntBASIC2.84□□□□□ -1.95
VPS45Q9NRW7 Y_RNA.451-201ENST00000384200 100 ntBASIC2.84□□□□□ -1.95
VPS45Q9NRW7 Y_RNA.524-201ENST00000384564 100 ntBASIC2.84□□□□□ -1.95
VPS45Q9NRW7 Y_RNA.561-201ENST00000384694 100 ntBASIC2.84□□□□□ -1.95
VPS45Q9NRW7 MIR218-1-201ENST00000384999 110 ntBASIC2.84□□□□□ -1.95
VPS45Q9NRW7 CBX3P9-201ENST00000402326 552 ntBASIC2.84□□□□□ -1.95
VPS45Q9NRW7 Y_RNA.605-201ENST00000410577 105 ntBASIC2.84□□□□□ -1.95
VPS45Q9NRW7 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.84□□□□□ -1.95
VPS45Q9NRW7 RPS3P1-201ENST00000456781 192 ntBASIC2.84□□□□□ -1.95
VPS45Q9NRW7 snoU13.30-201ENST00000458951 104 ntBASIC2.84□□□□□ -1.95
VPS45Q9NRW7 Y_RNA.638-201ENST00000459374 113 ntBASIC2.84□□□□□ -1.95
VPS45Q9NRW7 snoU13.26-201ENST00000459452 105 ntBASIC2.84□□□□□ -1.95
VPS45Q9NRW7 RPL30P1-201ENST00000488676 339 ntBASIC2.84□□□□□ -1.95
VPS45Q9NRW7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.84□□□□□ -1.95
VPS45Q9NRW7 MIR4680-201ENST00000580906 66 ntBASIC2.84□□□□□ -1.95
VPS45Q9NRW7 MIR4524B-201ENST00000581569 115 ntBASIC2.84□□□□□ -1.95
VPS45Q9NRW7 AC008121.3-201ENST00000618726 433 ntBASIC2.84□□□□□ -1.95
VPS45Q9NRW7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.84□□□□□ -1.95
VPS45Q9NRW7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
VPS45Q9NRW7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS45Q9NRW7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS45Q9NRW7 RNU4-42P-201ENST00000364738 142 ntBASIC2.83□□□□□ -1.96
VPS45Q9NRW7 SNORA29-201ENST00000384183 140 ntBASIC2.83□□□□□ -1.96
VPS45Q9NRW7 SNORA69.1-201ENST00000390904 137 ntBASIC2.83□□□□□ -1.96
VPS45Q9NRW7 MIR190B-201ENST00000401119 79 ntBASIC2.83□□□□□ -1.96
VPS45Q9NRW7 RNU6-1140P-201ENST00000410517 106 ntBASIC2.83□□□□□ -1.96
VPS45Q9NRW7 MTCO3P29-201ENST00000432119 779 ntBASIC2.83□□□□□ -1.96
VPS45Q9NRW7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.83□□□□□ -1.96
VPS45Q9NRW7 AC003982.1-202ENST00000469928 248 ntBASIC2.83□□□□□ -1.96
VPS45Q9NRW7 AL121594.1-201ENST00000475906 575 ntBASIC2.83□□□□□ -1.96
VPS45Q9NRW7 AC021146.2-201ENST00000504736 556 ntBASIC2.83□□□□□ -1.96
VPS45Q9NRW7 RNA5SP24-201ENST00000516478 95 ntBASIC2.83□□□□□ -1.96
VPS45Q9NRW7 Y_RNA.706-201ENST00000516933 99 ntBASIC2.83□□□□□ -1.96
VPS45Q9NRW7 AC021231.3-201ENST00000558497 370 ntBASIC2.83□□□□□ -1.96
VPS45Q9NRW7 ZNF861P-201ENST00000588126 639 ntBASIC2.83□□□□□ -1.96
VPS45Q9NRW7 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
VPS45Q9NRW7 AC008737.2-201ENST00000599446 118 ntBASIC2.83□□□□□ -1.96
VPS45Q9NRW7 AC087588.2-201ENST00000617667 426 ntBASIC2.83□□□□□ -1.96
VPS45Q9NRW7 AC137590.2-201ENST00000619709 240 ntBASIC2.83□□□□□ -1.96
VPS45Q9NRW7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.83□□□□□ -1.96
VPS45Q9NRW7 AC064859.1-201ENST00000624741 174 ntBASIC2.83□□□□□ -1.96
VPS45Q9NRW7 MIR4272-201ENST00000635924 64 ntBASIC2.83□□□□□ -1.96
VPS45Q9NRW7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS45Q9NRW7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
VPS45Q9NRW7 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
VPS45Q9NRW7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VPS45Q9NRW7 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
VPS45Q9NRW7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.82□□□□□ -1.96
VPS45Q9NRW7 RNU5B-2P-201ENST00000363036 113 ntBASIC2.82□□□□□ -1.96
VPS45Q9NRW7 SNORD115-32-201ENST00000364079 82 ntBASIC2.82□□□□□ -1.96
VPS45Q9NRW7 SNORA26.3-201ENST00000391119 136 ntBASIC2.82□□□□□ -1.96
VPS45Q9NRW7 AIMP1P2-201ENST00000425294 312 ntBASIC2.82□□□□□ -1.96
VPS45Q9NRW7 Z82188.1-201ENST00000436709 154 ntBASIC2.82□□□□□ -1.96
VPS45Q9NRW7 AL353752.1-201ENST00000454946 260 ntBASIC2.82□□□□□ -1.96
VPS45Q9NRW7 RN7SL297P-201ENST00000483161 293 ntBASIC2.82□□□□□ -1.96
VPS45Q9NRW7 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS45Q9NRW7 RNU2-53P-201ENST00000516257 147 ntBASIC2.82□□□□□ -1.96
VPS45Q9NRW7 SNORA48.11-201ENST00000517015 89 ntBASIC2.82□□□□□ -1.96
VPS45Q9NRW7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS45Q9NRW7 AC004486.1-201ENST00000546846 233 ntBASIC2.82□□□□□ -1.96
VPS45Q9NRW7 AC010928.2-201ENST00000588017 287 ntBASIC2.82□□□□□ -1.96
VPS45Q9NRW7 SNORD58B-201ENST00000607313 66 ntBASIC2.82□□□□□ -1.96
VPS45Q9NRW7 RMST_6.1-201ENST00000611980 203 ntBASIC2.82□□□□□ -1.96
VPS45Q9NRW7 AC138305.3-201ENST00000624988 240 ntBASIC2.82□□□□□ -1.96
VPS45Q9NRW7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS45Q9NRW7 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.82□□□□□ -1.96
VPS45Q9NRW7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.81□□□□□ -1.96
VPS45Q9NRW7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
VPS45Q9NRW7 RNA5SP68-201ENST00000363885 119 ntBASIC2.81□□□□□ -1.96
VPS45Q9NRW7 RNU6-985P-201ENST00000410182 104 ntBASIC2.81□□□□□ -1.96
VPS45Q9NRW7 AC113618.1-201ENST00000416747 285 ntBASIC2.81□□□□□ -1.96
VPS45Q9NRW7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.81□□□□□ -1.96
VPS45Q9NRW7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.81□□□□□ -1.96
VPS45Q9NRW7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.81□□□□□ -1.96
VPS45Q9NRW7 AC087477.1-201ENST00000465747 340 ntBASIC2.81□□□□□ -1.96
VPS45Q9NRW7 AF186996.7-201ENST00000492781 209 ntBASIC2.81□□□□□ -1.96
VPS45Q9NRW7 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.81□□□□□ -1.96
VPS45Q9NRW7 SNORA40.14-201ENST00000516543 86 ntBASIC2.81□□□□□ -1.96
VPS45Q9NRW7 RNU6-1137P-201ENST00000517073 99 ntBASIC2.81□□□□□ -1.96
VPS45Q9NRW7 Y_RNA.720-201ENST00000517166 92 ntBASIC2.81□□□□□ -1.96
VPS45Q9NRW7 Y_RNA.721-201ENST00000517207 102 ntBASIC2.81□□□□□ -1.96
VPS45Q9NRW7 AC091144.1-201ENST00000519573 138 ntBASIC2.81□□□□□ -1.96
VPS45Q9NRW7 HSBP1P1-201ENST00000555205 166 ntBASIC2.81□□□□□ -1.96
VPS45Q9NRW7 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.81□□□□□ -1.96
VPS45Q9NRW7 MIR3670-2-201ENST00000582974 65 ntBASIC2.81□□□□□ -1.96
VPS45Q9NRW7 MIR3136-201ENST00000583498 78 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 146.6 ms