Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AL670379.2-201ENST00000604983 252 ntBASIC2.51□□□□□ -2.01
DDX4Q9NQI0 MIR3670-4-201ENST00000612260 65 ntBASIC2.51□□□□□ -2.01
DDX4Q9NQI0 AC090574.1-201ENST00000623186 233 ntBASIC2.51□□□□□ -2.01
DDX4Q9NQI0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.51□□□□□ -2.01
DDX4Q9NQI0 SNORA43.4-201ENST00000629559 138 ntBASIC2.51□□□□□ -2.01
DDX4Q9NQI0 MTND4LP32-201ENST00000636111 270 ntBASIC2.51□□□□□ -2.01
DDX4Q9NQI0 SNORD98-201ENST00000636377 67 ntBASIC2.51□□□□□ -2.01
DDX4Q9NQI0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
DDX4Q9NQI0 MTND5P10-201ENST00000603719 1809 ntBASIC2.51□□□□□ -2.01
DDX4Q9NQI0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
DDX4Q9NQI0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
DDX4Q9NQI0 AC073544.1-201ENST00000600110 1595 ntBASIC2.5□□□□□ -2.01
DDX4Q9NQI0 Y_RNA.40-201ENST00000362645 93 ntBASIC2.5□□□□□ -2.01
DDX4Q9NQI0 Y_RNA.404-201ENST00000383978 102 ntBASIC2.5□□□□□ -2.01
DDX4Q9NQI0 AL590135.1-201ENST00000422215 156 ntBASIC2.5□□□□□ -2.01
DDX4Q9NQI0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.5□□□□□ -2.01
DDX4Q9NQI0 AC019205.3-201ENST00000424573 156 ntBASIC2.5□□□□□ -2.01
DDX4Q9NQI0 RPL30P4-201ENST00000429309 333 ntBASIC2.5□□□□□ -2.01
DDX4Q9NQI0 AC016700.2-201ENST00000446011 156 ntBASIC2.5□□□□□ -2.01
DDX4Q9NQI0 RPL30P15-201ENST00000457129 321 ntBASIC2.5□□□□□ -2.01
DDX4Q9NQI0 AC015911.1-201ENST00000495111 156 ntBASIC2.5□□□□□ -2.01
DDX4Q9NQI0 HMGB1P35-201ENST00000503360 598 ntBASIC2.5□□□□□ -2.01
DDX4Q9NQI0 AC108210.2-201ENST00000503681 201 ntBASIC2.5□□□□□ -2.01
DDX4Q9NQI0 AC091874.1-201ENST00000511402 339 ntBASIC2.5□□□□□ -2.01
DDX4Q9NQI0 SNORA25.11-201ENST00000515935 105 ntBASIC2.5□□□□□ -2.01
DDX4Q9NQI0 RNU5F-2P-201ENST00000516066 82 ntBASIC2.5□□□□□ -2.01
DDX4Q9NQI0 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.5□□□□□ -2.01
DDX4Q9NQI0 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.5□□□□□ -2.01
DDX4Q9NQI0 MIR4446-201ENST00000578505 67 ntBASIC2.5□□□□□ -2.01
DDX4Q9NQI0 AL034555.1-201ENST00000604816 211 ntBASIC2.5□□□□□ -2.01
DDX4Q9NQI0 AL133255.1-201ENST00000606374 441 ntBASIC2.5□□□□□ -2.01
DDX4Q9NQI0 AC084781.2-201ENST00000615568 161 ntBASIC2.5□□□□□ -2.01
DDX4Q9NQI0 AL359314.1-201ENST00000616913 261 ntBASIC2.5□□□□□ -2.01
DDX4Q9NQI0 AC137590.2-201ENST00000619709 240 ntBASIC2.5□□□□□ -2.01
DDX4Q9NQI0 MIR203B-201ENST00000636080 86 ntBASIC2.5□□□□□ -2.01
DDX4Q9NQI0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
DDX4Q9NQI0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.5□□□□□ -2.01
DDX4Q9NQI0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
DDX4Q9NQI0 Y_RNA.187-201ENST00000363918 113 ntBASIC2.49□□□□□ -2.01
DDX4Q9NQI0 RNA5SP99-201ENST00000364020 114 ntBASIC2.49□□□□□ -2.01
DDX4Q9NQI0 RNU4-9P-201ENST00000364951 139 ntBASIC2.49□□□□□ -2.01
DDX4Q9NQI0 Y_RNA.473-201ENST00000384333 102 ntBASIC2.49□□□□□ -2.01
DDX4Q9NQI0 U8.13-201ENST00000390842 128 ntBASIC2.49□□□□□ -2.01
DDX4Q9NQI0 RNU6-220P-201ENST00000390919 107 ntBASIC2.49□□□□□ -2.01
DDX4Q9NQI0 SNORA48.3-201ENST00000391081 134 ntBASIC2.49□□□□□ -2.01
DDX4Q9NQI0 Y_RNA.646-201ENST00000410980 101 ntBASIC2.49□□□□□ -2.01
DDX4Q9NQI0 AC243428.1-201ENST00000421099 264 ntBASIC2.49□□□□□ -2.01
DDX4Q9NQI0 Z82209.1-201ENST00000422141 2135 ntBASIC2.49□□□□□ -2.01
DDX4Q9NQI0 AC008267.5-201ENST00000424928 265 ntBASIC2.49□□□□□ -2.01
DDX4Q9NQI0 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.49□□□□□ -2.01
DDX4Q9NQI0 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.49□□□□□ -2.01
DDX4Q9NQI0 RN7SKP210-201ENST00000459176 261 ntBASIC2.49□□□□□ -2.01
DDX4Q9NQI0 FO393415.2-201ENST00000480085 343 ntBASIC2.49□□□□□ -2.01
DDX4Q9NQI0 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.49□□□□□ -2.01
DDX4Q9NQI0 HMGN1P13-201ENST00000505795 138 ntBASIC2.49□□□□□ -2.01
DDX4Q9NQI0 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.49□□□□□ -2.01
DDX4Q9NQI0 AL160413.1-201ENST00000622780 310 ntBASIC2.49□□□□□ -2.01
DDX4Q9NQI0 SCARNA4-201ENST00000629045 128 ntBASIC2.49□□□□□ -2.01
DDX4Q9NQI0 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.49□□□□□ -2.01
DDX4Q9NQI0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
DDX4Q9NQI0 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
DDX4Q9NQI0 Y_RNA.146-201ENST00000363549 102 ntBASIC2.48□□□□□ -2.01
DDX4Q9NQI0 RNU6-595P-201ENST00000363944 107 ntBASIC2.48□□□□□ -2.01
DDX4Q9NQI0 SNORA29-201ENST00000384183 140 ntBASIC2.48□□□□□ -2.01
DDX4Q9NQI0 MIR29B2-201ENST00000385055 81 ntBASIC2.48□□□□□ -2.01
DDX4Q9NQI0 MTCYBP2-201ENST00000407745 171 ntBASIC2.48□□□□□ -2.01
DDX4Q9NQI0 AF228730.4-201ENST00000421457 183 ntBASIC2.48□□□□□ -2.01
DDX4Q9NQI0 AL590556.1-201ENST00000423231 483 ntBASIC2.48□□□□□ -2.01
DDX4Q9NQI0 RPL23AP50-201ENST00000434149 455 ntBASIC2.48□□□□□ -2.01
DDX4Q9NQI0 HMGN2P23-201ENST00000456759 269 ntBASIC2.48□□□□□ -2.01
DDX4Q9NQI0 SCARNA16.2-201ENST00000516520 172 ntBASIC2.48□□□□□ -2.01
DDX4Q9NQI0 RNU6-1213P-201ENST00000517075 94 ntBASIC2.48□□□□□ -2.01
DDX4Q9NQI0 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.48□□□□□ -2.01
DDX4Q9NQI0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.48□□□□□ -2.01
DDX4Q9NQI0 MIR5694-201ENST00000581190 76 ntBASIC2.48□□□□□ -2.01
DDX4Q9NQI0 MIR5002-201ENST00000584713 97 ntBASIC2.48□□□□□ -2.01
DDX4Q9NQI0 RPL30P11-203ENST00000598995 310 ntBASIC2.48□□□□□ -2.01
DDX4Q9NQI0 AL050343.2-201ENST00000607338 280 ntBASIC2.48□□□□□ -2.01
DDX4Q9NQI0 Y_RNA.783-201ENST00000613546 102 ntBASIC2.48□□□□□ -2.01
DDX4Q9NQI0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.48□□□□□ -2.01
DDX4Q9NQI0 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.48□□□□□ -2.01
DDX4Q9NQI0 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
DDX4Q9NQI0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.47□□□□□ -2.01
DDX4Q9NQI0 RNU5B-2P-201ENST00000363036 113 ntBASIC2.47□□□□□ -2.01
DDX4Q9NQI0 Y_RNA.533-201ENST00000384596 114 ntBASIC2.47□□□□□ -2.01
DDX4Q9NQI0 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.47□□□□□ -2.01
DDX4Q9NQI0 RNA5SP181-201ENST00000410246 98 ntBASIC2.47□□□□□ -2.01
DDX4Q9NQI0 AL358453.1-201ENST00000422522 250 ntBASIC2.47□□□□□ -2.01
DDX4Q9NQI0 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
DDX4Q9NQI0 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.47□□□□□ -2.01
DDX4Q9NQI0 MTCO3P10-201ENST00000455912 772 ntBASIC2.47□□□□□ -2.01
DDX4Q9NQI0 RPL30P10-201ENST00000488148 337 ntBASIC2.47□□□□□ -2.01
DDX4Q9NQI0 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.47□□□□□ -2.01
DDX4Q9NQI0 AC093303.1-201ENST00000514549 295 ntBASIC2.47□□□□□ -2.01
DDX4Q9NQI0 RNU6-1170P-201ENST00000515974 106 ntBASIC2.47□□□□□ -2.01
DDX4Q9NQI0 RNA5SP384-201ENST00000516615 116 ntBASIC2.47□□□□□ -2.01
DDX4Q9NQI0 RNU6-264P-201ENST00000517134 104 ntBASIC2.47□□□□□ -2.01
DDX4Q9NQI0 AL590705.4-201ENST00000532209 134 ntBASIC2.47□□□□□ -2.01
DDX4Q9NQI0 CBX3P8-201ENST00000532412 525 ntBASIC2.47□□□□□ -2.01
DDX4Q9NQI0 CYP4A27P-201ENST00000567218 190 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms