Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.87□□□□□ -2.11
HPS4Q9NQG7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.87□□□□□ -2.11
HPS4Q9NQG7 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.87□□□□□ -2.11
HPS4Q9NQG7 AC016632.1-201ENST00000503994 196 ntBASIC1.87□□□□□ -2.11
HPS4Q9NQG7 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.87□□□□□ -2.11
HPS4Q9NQG7 AC107393.1-201ENST00000512403 346 ntBASIC1.87□□□□□ -2.11
HPS4Q9NQG7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.87□□□□□ -2.11
HPS4Q9NQG7 AC087854.1-201ENST00000519706 414 ntBASIC1.87□□□□□ -2.11
HPS4Q9NQG7 RNU6-323P-201ENST00000521915 107 ntBASIC1.87□□□□□ -2.11
HPS4Q9NQG7 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.87□□□□□ -2.11
HPS4Q9NQG7 AP005597.4-201ENST00000526762 229 ntBASIC1.87□□□□□ -2.11
HPS4Q9NQG7 MIR3923-201ENST00000579521 83 ntBASIC1.87□□□□□ -2.11
HPS4Q9NQG7 AC078795.3-201ENST00000602913 472 ntBASIC1.87□□□□□ -2.11
HPS4Q9NQG7 CTHRC1P1-201ENST00000605383 469 ntBASIC1.87□□□□□ -2.11
HPS4Q9NQG7 AC104458.1-201ENST00000608243 463 ntBASIC1.87□□□□□ -2.11
HPS4Q9NQG7 AC068944.2-201ENST00000610373 403 ntBASIC1.87□□□□□ -2.11
HPS4Q9NQG7 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.87□□□□□ -2.11
HPS4Q9NQG7 MIR3662-201ENST00000637030 95 ntBASIC1.87□□□□□ -2.11
HPS4Q9NQG7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HPS4Q9NQG7 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.86□□□□□ -2.11
HPS4Q9NQG7 RPL23AP36-201ENST00000413895 458 ntBASIC1.86□□□□□ -2.11
HPS4Q9NQG7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
HPS4Q9NQG7 SNRPEP10-201ENST00000420249 274 ntBASIC1.86□□□□□ -2.11
HPS4Q9NQG7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.86□□□□□ -2.11
HPS4Q9NQG7 NFU1P2-201ENST00000448700 469 ntBASIC1.86□□□□□ -2.11
HPS4Q9NQG7 RNU6-1037P-201ENST00000459571 107 ntBASIC1.86□□□□□ -2.11
HPS4Q9NQG7 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.86□□□□□ -2.11
HPS4Q9NQG7 AC008628.2-201ENST00000502605 298 ntBASIC1.86□□□□□ -2.11
HPS4Q9NQG7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HPS4Q9NQG7 RPL39P5-202ENST00000512505 151 ntBASIC1.86□□□□□ -2.11
HPS4Q9NQG7 AC025423.5-201ENST00000550230 219 ntBASIC1.86□□□□□ -2.11
HPS4Q9NQG7 MIR5692C1-201ENST00000585309 91 ntBASIC1.86□□□□□ -2.11
HPS4Q9NQG7 AC023043.2-201ENST00000589678 1026 ntBASIC1.86□□□□□ -2.11
HPS4Q9NQG7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.86□□□□□ -2.11
HPS4Q9NQG7 AP000654.2-201ENST00000605633 586 ntBASIC1.86□□□□□ -2.11
HPS4Q9NQG7 AL357078.3-201ENST00000607528 618 ntBASIC1.86□□□□□ -2.11
HPS4Q9NQG7 AC064836.2-201ENST00000609491 462 ntBASIC1.86□□□□□ -2.11
HPS4Q9NQG7 U6atac.1-201ENST00000616025 117 ntBASIC1.86□□□□□ -2.11
HPS4Q9NQG7 AC090617.10-201ENST00000624308 134 ntBASIC1.86□□□□□ -2.11
HPS4Q9NQG7 AL450472.1-202ENST00000637286 180 ntBASIC1.86□□□□□ -2.11
HPS4Q9NQG7 Y_RNA.238-201ENST00000364441 102 ntBASIC1.85□□□□□ -2.11
HPS4Q9NQG7 Y_RNA.248-201ENST00000364501 109 ntBASIC1.85□□□□□ -2.11
HPS4Q9NQG7 Y_RNA.373-201ENST00000365600 103 ntBASIC1.85□□□□□ -2.11
HPS4Q9NQG7 RNU11-3P-201ENST00000391111 133 ntBASIC1.85□□□□□ -2.11
HPS4Q9NQG7 RNA5SP201-201ENST00000410316 124 ntBASIC1.85□□□□□ -2.11
HPS4Q9NQG7 RNU6-1148P-201ENST00000410992 104 ntBASIC1.85□□□□□ -2.11
HPS4Q9NQG7 ARL5AP1-201ENST00000418991 388 ntBASIC1.85□□□□□ -2.11
HPS4Q9NQG7 EIF4EP2-201ENST00000422816 654 ntBASIC1.85□□□□□ -2.11
HPS4Q9NQG7 AC132942.1-201ENST00000486753 483 ntBASIC1.85□□□□□ -2.11
HPS4Q9NQG7 SNORA19.2-201ENST00000516013 114 ntBASIC1.85□□□□□ -2.11
HPS4Q9NQG7 CBX3P4-201ENST00000538909 354 ntBASIC1.85□□□□□ -2.11
HPS4Q9NQG7 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.85□□□□□ -2.11
HPS4Q9NQG7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.85□□□□□ -2.11
HPS4Q9NQG7 AC109446.1-201ENST00000566172 220 ntBASIC1.85□□□□□ -2.11
HPS4Q9NQG7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.85□□□□□ -2.11
HPS4Q9NQG7 FAM157A-202ENST00000615155 405 ntBASIC1.85□□□□□ -2.11
HPS4Q9NQG7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
HPS4Q9NQG7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
HPS4Q9NQG7 RNU6-1252P-201ENST00000363054 104 ntBASIC1.84□□□□□ -2.11
HPS4Q9NQG7 Y_RNA.99-201ENST00000363138 105 ntBASIC1.84□□□□□ -2.11
HPS4Q9NQG7 Y_RNA.164-201ENST00000363709 102 ntBASIC1.84□□□□□ -2.11
HPS4Q9NQG7 RNU6-26P-201ENST00000383985 107 ntBASIC1.84□□□□□ -2.11
HPS4Q9NQG7 SNORA36A-201ENST00000384221 132 ntBASIC1.84□□□□□ -2.11
HPS4Q9NQG7 Y_RNA.573-201ENST00000384763 105 ntBASIC1.84□□□□□ -2.11
HPS4Q9NQG7 RNA5SP465-201ENST00000391195 109 ntBASIC1.84□□□□□ -2.11
HPS4Q9NQG7 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HPS4Q9NQG7 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.84□□□□□ -2.11
HPS4Q9NQG7 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.84□□□□□ -2.11
HPS4Q9NQG7 MTATP6P13-201ENST00000438531 667 ntBASIC1.84□□□□□ -2.11
HPS4Q9NQG7 FGF7P6-202ENST00000451282 293 ntBASIC1.84□□□□□ -2.11
HPS4Q9NQG7 RNU7-66P-201ENST00000459469 62 ntBASIC1.84□□□□□ -2.11
HPS4Q9NQG7 RNU6-612P-201ENST00000516909 102 ntBASIC1.84□□□□□ -2.11
HPS4Q9NQG7 AC021231.3-201ENST00000558497 370 ntBASIC1.84□□□□□ -2.11
HPS4Q9NQG7 MIR4713-201ENST00000582691 75 ntBASIC1.84□□□□□ -2.11
HPS4Q9NQG7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.84□□□□□ -2.11
HPS4Q9NQG7 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.84□□□□□ -2.11
HPS4Q9NQG7 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.84□□□□□ -2.11
HPS4Q9NQG7 SNORA43.4-201ENST00000629559 138 ntBASIC1.84□□□□□ -2.11
HPS4Q9NQG7 AC100810.6-201ENST00000638068 285 ntBASIC1.84□□□□□ -2.11
HPS4Q9NQG7 AC121333.1-201ENST00000567488 2709 ntBASIC1.84□□□□□ -2.12
HPS4Q9NQG7 RNU6-661P-201ENST00000362409 107 ntBASIC1.83□□□□□ -2.12
HPS4Q9NQG7 RNU1-58P-201ENST00000362413 163 ntBASIC1.83□□□□□ -2.12
HPS4Q9NQG7 RNU6-234P-201ENST00000365229 104 ntBASIC1.83□□□□□ -2.12
HPS4Q9NQG7 RNU6-1329P-201ENST00000365664 107 ntBASIC1.83□□□□□ -2.12
HPS4Q9NQG7 U8.10-201ENST00000384260 133 ntBASIC1.83□□□□□ -2.12
HPS4Q9NQG7 AL357139.1-201ENST00000407792 426 ntBASIC1.83□□□□□ -2.12
HPS4Q9NQG7 RPL30P16-201ENST00000419341 429 ntBASIC1.83□□□□□ -2.12
HPS4Q9NQG7 HMGN2P18-201ENST00000450680 270 ntBASIC1.83□□□□□ -2.12
HPS4Q9NQG7 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.83□□□□□ -2.12
HPS4Q9NQG7 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.83□□□□□ -2.12
HPS4Q9NQG7 AC008834.1-201ENST00000511612 175 ntBASIC1.83□□□□□ -2.12
HPS4Q9NQG7 AC108729.3-201ENST00000513484 108 ntBASIC1.83□□□□□ -2.12
HPS4Q9NQG7 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.83□□□□□ -2.12
HPS4Q9NQG7 AP005660.1-201ENST00000522972 293 ntBASIC1.83□□□□□ -2.12
HPS4Q9NQG7 AC104576.1-201ENST00000524225 88 ntBASIC1.83□□□□□ -2.12
HPS4Q9NQG7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.83□□□□□ -2.12
HPS4Q9NQG7 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.83□□□□□ -2.12
HPS4Q9NQG7 AC022254.1-201ENST00000567857 235 ntBASIC1.83□□□□□ -2.12
HPS4Q9NQG7 MIR3198-2-201ENST00000577868 80 ntBASIC1.83□□□□□ -2.12
HPS4Q9NQG7 SNORA59B-202ENST00000578183 701 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms