Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC010401.1-201ENST00000463867 348 ntBASIC3.11□□□□□ -1.91
SEC61A2Q9H9S3 RN7SL594P-201ENST00000470590 287 ntBASIC3.11□□□□□ -1.91
SEC61A2Q9H9S3 AP002884.2-201ENST00000471647 395 ntBASIC3.11□□□□□ -1.91
SEC61A2Q9H9S3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.11□□□□□ -1.91
SEC61A2Q9H9S3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.11□□□□□ -1.91
SEC61A2Q9H9S3 AC115990.1-201ENST00000526957 301 ntBASIC3.11□□□□□ -1.91
SEC61A2Q9H9S3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.11□□□□□ -1.91
SEC61A2Q9H9S3 AC026333.2-201ENST00000542164 106 ntBASIC3.11□□□□□ -1.91
SEC61A2Q9H9S3 HIGD1AP1-201ENST00000550979 275 ntBASIC3.11□□□□□ -1.91
SEC61A2Q9H9S3 TGIF1P1-201ENST00000558095 802 ntBASIC3.11□□□□□ -1.91
SEC61A2Q9H9S3 AC105137.2-201ENST00000569073 466 ntBASIC3.11□□□□□ -1.91
SEC61A2Q9H9S3 MIR3923-201ENST00000579521 83 ntBASIC3.11□□□□□ -1.91
SEC61A2Q9H9S3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SEC61A2Q9H9S3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.11□□□□□ -1.91
SEC61A2Q9H9S3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SEC61A2Q9H9S3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 Y_RNA.7-201ENST00000362352 102 ntBASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 RNU6-529P-201ENST00000363383 104 ntBASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 Y_RNA.182-201ENST00000363880 111 ntBASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 Y_RNA.238-201ENST00000364441 102 ntBASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 RNU6-805P-201ENST00000365643 106 ntBASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 SNORA18.3-201ENST00000384122 132 ntBASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 RNU6-1310P-201ENST00000384153 107 ntBASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 BMS1P22-201ENST00000414726 313 ntBASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 AC096649.2-201ENST00000416186 393 ntBASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 AL357552.1-201ENST00000445254 415 ntBASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 SNORD105B-201ENST00000458770 79 ntBASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 U8.19-201ENST00000459095 133 ntBASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 Y_RNA.637-201ENST00000459424 114 ntBASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 RPS27P29-201ENST00000463110 252 ntBASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 RPL23AP62-201ENST00000463396 453 ntBASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 AC107626.1-201ENST00000471084 183 ntBASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 AC110768.1-201ENST00000509222 400 ntBASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 SNORA70.19-201ENST00000516717 90 ntBASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 SUMO2P18-201ENST00000518873 252 ntBASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 MIR3609-201ENST00000582661 80 ntBASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 AL133393.1-201ENST00000603277 287 ntBASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 AC022149.2-201ENST00000621061 203 ntBASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 AC018692.3-201ENST00000623929 123 ntBASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.1□□□□□ -1.91
SEC61A2Q9H9S3 AL513302.2-201ENST00000562313 1842 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 AC002543.1-201ENST00000299783 1954 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 RNU1-75P-201ENST00000347264 129 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 RNU6-818P-201ENST00000364837 108 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 SNORD87-201ENST00000364849 89 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 Y_RNA.412-201ENST00000384001 104 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 Y_RNA.497-201ENST00000384447 98 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 MIR490-201ENST00000384865 128 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 MIR449B-201ENST00000384995 97 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 RNU6-763P-201ENST00000390865 106 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 RNU6-131P-201ENST00000391144 107 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 PTMAP5-201ENST00000393073 333 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 HSPE1P26-201ENST00000405341 275 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 RNU2-49P-201ENST00000410666 184 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 RNU2-37P-201ENST00000410695 177 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 RPL23AP82-202ENST00000427528 469 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 YME1L1P1-201ENST00000429435 297 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 SEPT7P4-201ENST00000437076 306 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 AL358232.1-201ENST00000448030 501 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 RN7SL442P-201ENST00000473804 320 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 AC025518.1-201ENST00000479856 347 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 MIR3136-201ENST00000583498 78 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 AC011471.1-201ENST00000585766 187 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 SNRPGP20-201ENST00000604477 205 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 MIR7851-201ENST00000610611 160 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 AC091895.1-201ENST00000624494 256 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 MTND1P7-201ENST00000632801 297 ntBASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SEC61A2Q9H9S3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
SEC61A2Q9H9S3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 AL672296.1-201ENST00000427780 2158 ntBASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 RNU1-62P-201ENST00000362599 164 ntBASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 Y_RNA.40-201ENST00000362645 93 ntBASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 RNU6-454P-201ENST00000364292 107 ntBASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 AP002088.1-201ENST00000382740 395 ntBASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 RNU6-449P-201ENST00000383914 107 ntBASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 RNU6-1117P-201ENST00000384525 104 ntBASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 RNU6-19P-201ENST00000384718 107 ntBASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 Y_RNA.580-201ENST00000391004 95 ntBASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 AL591034.1-201ENST00000407447 340 ntBASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 MIR320B2-201ENST00000408479 138 ntBASIC3.08□□□□□ -1.92
SEC61A2Q9H9S3 U3.40-201ENST00000408706 208 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms