Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RNF39Q9H2S5 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.65□□□□□ -1.51
RNF39Q9H2S5 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF39Q9H2S5 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
RNF39Q9H2S5 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF39Q9H2S5 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RNF39Q9H2S5 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RNF39Q9H2S5 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF39Q9H2S5 MIRLET7F1-201ENST00000362202 87 ntBASIC5.64□□□□□ -1.51
RNF39Q9H2S5 RNY1P2-201ENST00000364820 117 ntBASIC5.64□□□□□ -1.51
RNF39Q9H2S5 RNA5SP455-201ENST00000365190 119 ntBASIC5.64□□□□□ -1.51
RNF39Q9H2S5 Y_RNA.510-201ENST00000384511 114 ntBASIC5.64□□□□□ -1.51
RNF39Q9H2S5 RPS29P10-201ENST00000439197 166 ntBASIC5.64□□□□□ -1.51
RNF39Q9H2S5 SNRPGP12-201ENST00000449481 213 ntBASIC5.64□□□□□ -1.51
RNF39Q9H2S5 SNORA74.3-201ENST00000517108 154 ntBASIC5.64□□□□□ -1.51
RNF39Q9H2S5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC5.64□□□□□ -1.51
RNF39Q9H2S5 AC079587.1-201ENST00000603846 277 ntBASIC5.64□□□□□ -1.51
RNF39Q9H2S5 AL161722.3-201ENST00000605789 2983 ntBASIC5.64□□□□□ -1.51
RNF39Q9H2S5 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF39Q9H2S5 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.64□□□□□ -1.51
RNF39Q9H2S5 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RNF39Q9H2S5 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.63□□□□□ -1.51
RNF39Q9H2S5 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RNF39Q9H2S5 Y_RNA.283-201ENST00000364798 112 ntBASIC5.63□□□□□ -1.51
RNF39Q9H2S5 Y_RNA.370-201ENST00000365589 108 ntBASIC5.63□□□□□ -1.51
RNF39Q9H2S5 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.63□□□□□ -1.51
RNF39Q9H2S5 RNU7-73P-201ENST00000458743 63 ntBASIC5.63□□□□□ -1.51
RNF39Q9H2S5 MIR6748-201ENST00000610433 71 ntBASIC5.63□□□□□ -1.51
RNF39Q9H2S5 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC5.63□□□□□ -1.51
RNF39Q9H2S5 MIR6133-201ENST00000617057 108 ntBASIC5.63□□□□□ -1.51
RNF39Q9H2S5 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
RNF39Q9H2S5 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RNF39Q9H2S5 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RNF39Q9H2S5 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RNF39Q9H2S5 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
RNF39Q9H2S5 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNF39Q9H2S5 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.62□□□□□ -1.51
RNF39Q9H2S5 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.62□□□□□ -1.51
RNF39Q9H2S5 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
RNF39Q9H2S5 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RNF39Q9H2S5 RNU6-913P-201ENST00000390913 95 ntBASIC5.62□□□□□ -1.51
RNF39Q9H2S5 ABCC13-202ENST00000463099 3842 ntBASIC5.62□□□□□ -1.51
RNF39Q9H2S5 RNU6-850P-201ENST00000516934 103 ntBASIC5.62□□□□□ -1.51
RNF39Q9H2S5 MIR4691-201ENST00000583764 85 ntBASIC5.62□□□□□ -1.51
RNF39Q9H2S5 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC5.62□□□□□ -1.51
RNF39Q9H2S5 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
RNF39Q9H2S5 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNF39Q9H2S5 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RNF39Q9H2S5 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.62□□□□□ -1.51
RNF39Q9H2S5 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RNF39Q9H2S5 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
RNF39Q9H2S5 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
RNF39Q9H2S5 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RNF39Q9H2S5 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF39Q9H2S5 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC5.61□□□□□ -1.51
RNF39Q9H2S5 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF39Q9H2S5 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RNF39Q9H2S5 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RNF39Q9H2S5 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RNF39Q9H2S5 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.61□□□□□ -1.51
RNF39Q9H2S5 SNORA38-201ENST00000363946 132 ntBASIC5.61□□□□□ -1.51
RNF39Q9H2S5 Y_RNA.207-201ENST00000364142 106 ntBASIC5.61□□□□□ -1.51
RNF39Q9H2S5 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RNF39Q9H2S5 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
RNF39Q9H2S5 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF39Q9H2S5 MIR589-201ENST00000385238 99 ntBASIC5.61□□□□□ -1.51
RNF39Q9H2S5 RNA5SP323-201ENST00000391094 133 ntBASIC5.61□□□□□ -1.51
RNF39Q9H2S5 RNU1-101P-201ENST00000391171 127 ntBASIC5.61□□□□□ -1.51
RNF39Q9H2S5 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF39Q9H2S5 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.61□□□□□ -1.51
RNF39Q9H2S5 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
RNF39Q9H2S5 AC015922.2-201ENST00000435593 184 ntBASIC5.61□□□□□ -1.51
RNF39Q9H2S5 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.61□□□□□ -1.51
RNF39Q9H2S5 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF39Q9H2S5 MIR3938-201ENST00000582157 103 ntBASIC5.61□□□□□ -1.51
RNF39Q9H2S5 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.61□□□□□ -1.51
RNF39Q9H2S5 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.61□□□□□ -1.51
RNF39Q9H2S5 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.61□□□□□ -1.51
RNF39Q9H2S5 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF39Q9H2S5 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RNF39Q9H2S5 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RNF39Q9H2S5 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RNF39Q9H2S5 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RNF39Q9H2S5 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.61□□□□□ -1.51
RNF39Q9H2S5 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF39Q9H2S5 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF39Q9H2S5 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF39Q9H2S5 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF39Q9H2S5 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF39Q9H2S5 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF39Q9H2S5 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF39Q9H2S5 RNU6-163P-201ENST00000384396 106 ntBASIC5.6□□□□□ -1.51
RNF39Q9H2S5 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RNF39Q9H2S5 Y_RNA.606-201ENST00000410579 103 ntBASIC5.6□□□□□ -1.51
RNF39Q9H2S5 AC097463.2-201ENST00000421074 142 ntBASIC5.6□□□□□ -1.51
RNF39Q9H2S5 SNORA31.1-201ENST00000515993 133 ntBASIC5.6□□□□□ -1.51
RNF39Q9H2S5 SNORA31.5-201ENST00000516190 133 ntBASIC5.6□□□□□ -1.51
RNF39Q9H2S5 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF39Q9H2S5 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RNF39Q9H2S5 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms