Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 RPL21P38-201ENST00000418090 167 ntBASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 AL445305.1-201ENST00000432577 575 ntBASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 RPS29P6-201ENST00000438196 145 ntBASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 TRBVB-201ENST00000477100 408 ntBASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 AC006483.1-201ENST00000487308 313 ntBASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 RNA5SP341-201ENST00000516261 117 ntBASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 AC079598.5-201ENST00000547460 117 ntBASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 AC136932.1-201ENST00000574771 208 ntBASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 AC073410.2-201ENST00000603240 332 ntBASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 AL133393.1-201ENST00000603277 287 ntBASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 AC005520.5-201ENST00000613926 164 ntBASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.86□□□□□ -1.95
AMBRA1Q9C0C7 MAPK10-322ENST00000641485 4530 ntBASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 RNA5SP361-201ENST00000362686 118 ntBASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 RNA5SP374-201ENST00000362939 125 ntBASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 RNU6-799P-201ENST00000363567 107 ntBASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 RNU6-379P-201ENST00000363813 104 ntBASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 Y_RNA.447-201ENST00000384184 113 ntBASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 Y_RNA.489-201ENST00000384410 101 ntBASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 MIR215-201ENST00000384858 110 ntBASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 MIR208B-201ENST00000401172 77 ntBASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 CBX3P9-201ENST00000402326 552 ntBASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 RNU2-20P-201ENST00000410425 191 ntBASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 AC097463.2-201ENST00000421074 142 ntBASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 AC096920.1-201ENST00000423991 241 ntBASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 MIR4300-201ENST00000581016 96 ntBASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 MIR6715A-201ENST00000615929 79 ntBASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 MIR376A1-201ENST00000616574 68 ntBASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
AMBRA1Q9C0C7 MTND5P6-201ENST00000422338 1798 ntBASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 Y_RNA.84-201ENST00000363011 104 ntBASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 RNU5F-3P-201ENST00000363767 117 ntBASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 RNU6-873P-201ENST00000363833 107 ntBASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 Y_RNA.350-201ENST00000365409 98 ntBASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 RNU1-57P-201ENST00000384491 166 ntBASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 AL590004.2-201ENST00000404787 371 ntBASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 RNA5SP274-201ENST00000410484 108 ntBASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 RNU6-1203P-201ENST00000410703 110 ntBASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 RNU2-25P-201ENST00000411041 191 ntBASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 Z98742.2-201ENST00000431564 187 ntBASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 RN7SL633P-201ENST00000488974 297 ntBASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 SNORA25.14-201ENST00000516481 132 ntBASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 AL034555.1-201ENST00000604816 211 ntBASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 AC010999.1-201ENST00000611856 324 ntBASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 MIR6733-201ENST00000635723 61 ntBASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 ZNF204P-201ENST00000416749 2397 ntBASIC2.84□□□□□ -1.95
AMBRA1Q9C0C7 BX322639.1-202ENST00000423987 2213 ntBASIC2.84□□□□□ -1.96
AMBRA1Q9C0C7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
AMBRA1Q9C0C7 Y_RNA.14-201ENST00000362415 103 ntBASIC2.83□□□□□ -1.96
AMBRA1Q9C0C7 RNU6-655P-201ENST00000362858 107 ntBASIC2.83□□□□□ -1.96
AMBRA1Q9C0C7 snoU2_19.2-201ENST00000363024 80 ntBASIC2.83□□□□□ -1.96
AMBRA1Q9C0C7 RNU6-1210P-201ENST00000363775 107 ntBASIC2.83□□□□□ -1.96
AMBRA1Q9C0C7 RNU6-378P-201ENST00000384324 107 ntBASIC2.83□□□□□ -1.96
AMBRA1Q9C0C7 RNU6-937P-201ENST00000384325 106 ntBASIC2.83□□□□□ -1.96
AMBRA1Q9C0C7 RNU6-847P-201ENST00000411115 108 ntBASIC2.83□□□□□ -1.96
AMBRA1Q9C0C7 RNU6-1001P-201ENST00000411265 100 ntBASIC2.83□□□□□ -1.96
AMBRA1Q9C0C7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.83□□□□□ -1.96
AMBRA1Q9C0C7 AC112220.1-201ENST00000434628 355 ntBASIC2.83□□□□□ -1.96
AMBRA1Q9C0C7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.83□□□□□ -1.96
AMBRA1Q9C0C7 AC010095.1-201ENST00000443543 144 ntBASIC2.83□□□□□ -1.96
AMBRA1Q9C0C7 AC006445.1-201ENST00000491925 405 ntBASIC2.83□□□□□ -1.96
AMBRA1Q9C0C7 AC022080.3-201ENST00000544433 482 ntBASIC2.83□□□□□ -1.96
AMBRA1Q9C0C7 MIR3668-201ENST00000582138 75 ntBASIC2.83□□□□□ -1.96
AMBRA1Q9C0C7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.83□□□□□ -1.96
AMBRA1Q9C0C7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms