Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 AP002826.1-201ENST00000608835 315 ntBASIC1.04□□□□□ -2.24
KRTAP4-1Q9BYQ7 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.04□□□□□ -2.24
KRTAP4-1Q9BYQ7 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC1.04□□□□□ -2.24
KRTAP4-1Q9BYQ7 MIR6132-201ENST00000622083 109 ntBASIC1.04□□□□□ -2.24
KRTAP4-1Q9BYQ7 AC011155.2-201ENST00000623202 216 ntBASIC1.04□□□□□ -2.24
KRTAP4-1Q9BYQ7 AC132825.8-201ENST00000640783 297 ntBASIC1.04□□□□□ -2.24
KRTAP4-1Q9BYQ7 CDC27P2-201ENST00000425026 1922 ntBASIC1.04□□□□□ -2.24
KRTAP4-1Q9BYQ7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC1.04□□□□□ -2.24
KRTAP4-1Q9BYQ7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
KRTAP4-1Q9BYQ7 ZNF355P-201ENST00000427301 3216 ntBASIC1.04□□□□□ -2.24
KRTAP4-1Q9BYQ7 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 Z75746.1-201ENST00000440243 2080 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 RNU6-251P-201ENST00000363235 104 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 Y_RNA.121-201ENST00000363309 113 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 RNU6-188P-201ENST00000364207 107 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 RNU6-923P-201ENST00000364753 107 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 RNU6-818P-201ENST00000364837 108 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 RNA5SP173-201ENST00000364857 136 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 DEFA7P-201ENST00000382676 285 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 RNU6-1296P-201ENST00000383879 107 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 Y_RNA.439-201ENST00000384119 94 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 RNU6-214P-201ENST00000384130 107 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 RNU6-36P-201ENST00000384172 107 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 RNU6-1152P-201ENST00000384576 107 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 RNU6-1127P-201ENST00000384580 107 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 MIR628-201ENST00000385229 95 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 MIR708-201ENST00000390708 88 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 SNORD78.1-201ENST00000390866 65 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 RNA5SP219-201ENST00000390940 113 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 SNORA48.3-201ENST00000391081 134 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 RNU6-952P-201ENST00000391164 108 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AL033519.2-201ENST00000403958 392 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 Y_RNA.590-201ENST00000410140 107 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 RNY4P30-201ENST00000410216 95 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 Y_RNA.592-201ENST00000410274 109 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 BX682237.1-201ENST00000415016 335 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 NDUFB4P7-201ENST00000423198 363 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AIMP1P2-201ENST00000425294 312 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 UBE2V1P4-201ENST00000425374 344 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 TRAPPC2P9-201ENST00000434556 343 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 RPL35AP22-201ENST00000436855 335 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AC074290.1-201ENST00000448883 135 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AC007395.1-201ENST00000451333 677 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 HSPE1P25-201ENST00000455484 251 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 RNU6-1211P-201ENST00000459179 105 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 Y_RNA.651-201ENST00000459380 103 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 RNU6-1037P-201ENST00000459571 107 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 DYNLL1P5-201ENST00000467158 270 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AC087884.1-201ENST00000469738 328 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 RPL23AP70-201ENST00000483361 460 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AC108729.3-201ENST00000513484 108 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 RNU6-798P-201ENST00000516912 103 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AC011979.2-201ENST00000527568 352 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AC008083.2-201ENST00000546707 476 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AC025260.1-201ENST00000548858 430 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AC090502.2-201ENST00000549267 280 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 HSPE1P4-201ENST00000550617 308 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AC026371.1-201ENST00000551867 419 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 HSPE1P3-201ENST00000559254 309 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 MIR5701-3-201ENST00000578890 82 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 MIR5701-1-201ENST00000585138 82 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AL353997.4-201ENST00000586196 166 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AL356575.1-201ENST00000603008 283 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AL133393.1-201ENST00000603277 287 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 MIR5701-2-201ENST00000615634 82 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AL359547.2-201ENST00000615810 418 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AC073349.3-201ENST00000617616 186 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AC097372.5-201ENST00000623665 376 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 AC068647.2-201ENST00000637380 353 ntBASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-1Q9BYQ7 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.03□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms