Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 Y_RNA.292-201ENST00000364904 97 ntBASIC3.6□□□□□ -1.83
LRRC3Q9BY71 SNORA48.2-201ENST00000390926 124 ntBASIC3.6□□□□□ -1.83
LRRC3Q9BY71 RNU6-1248P-201ENST00000391096 64 ntBASIC3.6□□□□□ -1.83
LRRC3Q9BY71 SNORA12-201ENST00000391162 147 ntBASIC3.6□□□□□ -1.83
LRRC3Q9BY71 RNU2-54P-201ENST00000410299 190 ntBASIC3.6□□□□□ -1.83
LRRC3Q9BY71 AC024067.1-201ENST00000426199 223 ntBASIC3.6□□□□□ -1.83
LRRC3Q9BY71 SUMO1P3-201ENST00000439961 304 ntBASIC3.6□□□□□ -1.83
LRRC3Q9BY71 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.6□□□□□ -1.83
LRRC3Q9BY71 RPS29P26-201ENST00000477483 171 ntBASIC3.6□□□□□ -1.83
LRRC3Q9BY71 AC140059.1-201ENST00000489238 361 ntBASIC3.6□□□□□ -1.83
LRRC3Q9BY71 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.6□□□□□ -1.83
LRRC3Q9BY71 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.6□□□□□ -1.83
LRRC3Q9BY71 PHBP14-201ENST00000512887 367 ntBASIC3.6□□□□□ -1.83
LRRC3Q9BY71 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.6□□□□□ -1.83
LRRC3Q9BY71 AP002392.1-201ENST00000537692 208 ntBASIC3.6□□□□□ -1.83
LRRC3Q9BY71 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.6□□□□□ -1.83
LRRC3Q9BY71 Z83818.1-201ENST00000603584 150 ntBASIC3.6□□□□□ -1.83
LRRC3Q9BY71 RNVU1-4-201ENST00000612985 164 ntBASIC3.6□□□□□ -1.83
LRRC3Q9BY71 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LRRC3Q9BY71 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
LRRC3Q9BY71 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LRRC3Q9BY71 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.59□□□□□ -1.83
LRRC3Q9BY71 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
LRRC3Q9BY71 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LRRC3Q9BY71 RNU4-80P-201ENST00000363200 141 ntBASIC3.59□□□□□ -1.83
LRRC3Q9BY71 Y_RNA.122-201ENST00000363331 96 ntBASIC3.59□□□□□ -1.83
LRRC3Q9BY71 RNU6-283P-201ENST00000364788 107 ntBASIC3.59□□□□□ -1.83
LRRC3Q9BY71 RNU6-1062P-201ENST00000383908 107 ntBASIC3.59□□□□□ -1.83
LRRC3Q9BY71 RNU6-662P-201ENST00000384253 104 ntBASIC3.59□□□□□ -1.83
LRRC3Q9BY71 Y_RNA.626-201ENST00000411288 95 ntBASIC3.59□□□□□ -1.83
LRRC3Q9BY71 Z92545.1-201ENST00000411782 234 ntBASIC3.59□□□□□ -1.83
LRRC3Q9BY71 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.59□□□□□ -1.83
LRRC3Q9BY71 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.59□□□□□ -1.83
LRRC3Q9BY71 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.59□□□□□ -1.83
LRRC3Q9BY71 RAC1P5-201ENST00000512182 576 ntBASIC3.59□□□□□ -1.83
LRRC3Q9BY71 SNORD116-28-201ENST00000516123 91 ntBASIC3.59□□□□□ -1.83
LRRC3Q9BY71 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.59□□□□□ -1.83
LRRC3Q9BY71 MIR4738-201ENST00000579134 87 ntBASIC3.59□□□□□ -1.83
LRRC3Q9BY71 MIR3145-201ENST00000580727 82 ntBASIC3.59□□□□□ -1.83
LRRC3Q9BY71 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.59□□□□□ -1.83
LRRC3Q9BY71 FTX_2.1-201ENST00000618816 94 ntBASIC3.59□□□□□ -1.83
LRRC3Q9BY71 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.59□□□□□ -1.83
LRRC3Q9BY71 U6.98-201ENST00000637157 84 ntBASIC3.59□□□□□ -1.83
LRRC3Q9BY71 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
LRRC3Q9BY71 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.59□□□□□ -1.84
LRRC3Q9BY71 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LRRC3Q9BY71 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
LRRC3Q9BY71 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.59□□□□□ -1.84
LRRC3Q9BY71 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
LRRC3Q9BY71 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRRC3Q9BY71 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
LRRC3Q9BY71 UBE2WP1-201ENST00000362030 340 ntBASIC3.58□□□□□ -1.84
LRRC3Q9BY71 RNU6-1027P-201ENST00000383998 107 ntBASIC3.58□□□□□ -1.84
LRRC3Q9BY71 AC009963.1-201ENST00000417265 157 ntBASIC3.58□□□□□ -1.84
LRRC3Q9BY71 Y_RNA.638-201ENST00000459374 113 ntBASIC3.58□□□□□ -1.84
LRRC3Q9BY71 COX6CP14-201ENST00000469580 174 ntBASIC3.58□□□□□ -1.84
LRRC3Q9BY71 RPS29P2-201ENST00000479278 136 ntBASIC3.58□□□□□ -1.84
LRRC3Q9BY71 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.58□□□□□ -1.84
LRRC3Q9BY71 FCF1P8-201ENST00000510322 597 ntBASIC3.58□□□□□ -1.84
LRRC3Q9BY71 DEFB131C-201ENST00000528817 165 ntBASIC3.58□□□□□ -1.84
LRRC3Q9BY71 AC026333.2-201ENST00000542164 106 ntBASIC3.58□□□□□ -1.84
LRRC3Q9BY71 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.58□□□□□ -1.84
LRRC3Q9BY71 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.58□□□□□ -1.84
LRRC3Q9BY71 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRRC3Q9BY71 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRRC3Q9BY71 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
LRRC3Q9BY71 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.57□□□□□ -1.84
LRRC3Q9BY71 RNU6-1020P-201ENST00000363684 107 ntBASIC3.57□□□□□ -1.84
LRRC3Q9BY71 SNORA38.1-201ENST00000364172 131 ntBASIC3.57□□□□□ -1.84
LRRC3Q9BY71 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.57□□□□□ -1.84
LRRC3Q9BY71 CD24P4-201ENST00000382840 243 ntBASIC3.57□□□□□ -1.84
LRRC3Q9BY71 NDUFB4P4-201ENST00000404822 243 ntBASIC3.57□□□□□ -1.84
LRRC3Q9BY71 Y_RNA.597-201ENST00000410463 100 ntBASIC3.57□□□□□ -1.84
LRRC3Q9BY71 AC004866.1-201ENST00000411748 78 ntBASIC3.57□□□□□ -1.84
LRRC3Q9BY71 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.57□□□□□ -1.84
LRRC3Q9BY71 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LRRC3Q9BY71 SCARNA17.1-201ENST00000516211 143 ntBASIC3.57□□□□□ -1.84
LRRC3Q9BY71 SCARNA17.2-201ENST00000516334 143 ntBASIC3.57□□□□□ -1.84
LRRC3Q9BY71 RNU5F-4P-201ENST00000516581 114 ntBASIC3.57□□□□□ -1.84
LRRC3Q9BY71 DEFB117-201ENST00000602356 141 ntBASIC3.57□□□□□ -1.84
LRRC3Q9BY71 RPL17P51-201ENST00000605218 238 ntBASIC3.57□□□□□ -1.84
LRRC3Q9BY71 AC005828.6-201ENST00000606610 232 ntBASIC3.57□□□□□ -1.84
LRRC3Q9BY71 AC107294.3-201ENST00000609211 526 ntBASIC3.57□□□□□ -1.84
LRRC3Q9BY71 SCARNA17.4-201ENST00000614296 143 ntBASIC3.57□□□□□ -1.84
LRRC3Q9BY71 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRRC3Q9BY71 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LRRC3Q9BY71 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
LRRC3Q9BY71 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.56□□□□□ -1.84
LRRC3Q9BY71 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LRRC3Q9BY71 Y_RNA.82-201ENST00000363000 102 ntBASIC3.56□□□□□ -1.84
LRRC3Q9BY71 Y_RNA.92-201ENST00000363043 102 ntBASIC3.56□□□□□ -1.84
LRRC3Q9BY71 Y_RNA.235-201ENST00000364412 102 ntBASIC3.56□□□□□ -1.84
LRRC3Q9BY71 Y_RNA.306-201ENST00000365015 102 ntBASIC3.56□□□□□ -1.84
LRRC3Q9BY71 Y_RNA.312-201ENST00000365089 102 ntBASIC3.56□□□□□ -1.84
LRRC3Q9BY71 Y_RNA.322-201ENST00000365151 102 ntBASIC3.56□□□□□ -1.84
LRRC3Q9BY71 RNU6-651P-201ENST00000411040 105 ntBASIC3.56□□□□□ -1.84
LRRC3Q9BY71 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.56□□□□□ -1.84
LRRC3Q9BY71 AC006989.1-201ENST00000427212 131 ntBASIC3.56□□□□□ -1.84
LRRC3Q9BY71 TOMM22P2-201ENST00000430735 237 ntBASIC3.56□□□□□ -1.84
LRRC3Q9BY71 AC104332.1-201ENST00000440471 797 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms