Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.51□□□□□ -2.17
RSPO3Q9BXY4 AC096920.1-201ENST00000423991 241 ntBASIC1.51□□□□□ -2.17
RSPO3Q9BXY4 AL365400.1-201ENST00000431854 640 ntBASIC1.51□□□□□ -2.17
RSPO3Q9BXY4 MTND5P20-201ENST00000448677 143 ntBASIC1.51□□□□□ -2.17
RSPO3Q9BXY4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.51□□□□□ -2.17
RSPO3Q9BXY4 MTND4P17-201ENST00000470444 350 ntBASIC1.51□□□□□ -2.17
RSPO3Q9BXY4 AC104564.1-201ENST00000493028 407 ntBASIC1.51□□□□□ -2.17
RSPO3Q9BXY4 MTND5P5-201ENST00000503764 376 ntBASIC1.51□□□□□ -2.17
RSPO3Q9BXY4 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.51□□□□□ -2.17
RSPO3Q9BXY4 AC026371.1-201ENST00000551867 419 ntBASIC1.51□□□□□ -2.17
RSPO3Q9BXY4 UBE2V2P2-201ENST00000587677 504 ntBASIC1.51□□□□□ -2.17
RSPO3Q9BXY4 AC069294.1-201ENST00000608397 350 ntBASIC1.51□□□□□ -2.17
RSPO3Q9BXY4 uc_338.15-201ENST00000615470 191 ntBASIC1.51□□□□□ -2.17
RSPO3Q9BXY4 MTND5P10-201ENST00000603719 1809 ntBASIC1.51□□□□□ -2.17
RSPO3Q9BXY4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.51□□□□□ -2.17
RSPO3Q9BXY4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
RSPO3Q9BXY4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
RSPO3Q9BXY4 Y_RNA.40-201ENST00000362645 93 ntBASIC1.5□□□□□ -2.17
RSPO3Q9BXY4 RNU6-562P-201ENST00000362731 107 ntBASIC1.5□□□□□ -2.17
RSPO3Q9BXY4 RNU6-1317P-201ENST00000364582 104 ntBASIC1.5□□□□□ -2.17
RSPO3Q9BXY4 Y_RNA.473-201ENST00000384333 102 ntBASIC1.5□□□□□ -2.17
RSPO3Q9BXY4 Y_RNA.474-201ENST00000384341 102 ntBASIC1.5□□□□□ -2.17
RSPO3Q9BXY4 MIR218-1-201ENST00000384999 110 ntBASIC1.5□□□□□ -2.17
RSPO3Q9BXY4 RPS3AP52-201ENST00000435639 297 ntBASIC1.5□□□□□ -2.17
RSPO3Q9BXY4 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.5□□□□□ -2.17
RSPO3Q9BXY4 MTCO2P3-201ENST00000442543 421 ntBASIC1.5□□□□□ -2.17
RSPO3Q9BXY4 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.5□□□□□ -2.17
RSPO3Q9BXY4 MTND1P17-201ENST00000448961 204 ntBASIC1.5□□□□□ -2.17
RSPO3Q9BXY4 RPS29P27-201ENST00000463711 170 ntBASIC1.5□□□□□ -2.17
RSPO3Q9BXY4 AC091874.1-201ENST00000511402 339 ntBASIC1.5□□□□□ -2.17
RSPO3Q9BXY4 PTP4A1P4-201ENST00000512479 322 ntBASIC1.5□□□□□ -2.17
RSPO3Q9BXY4 RNU5B-3P-201ENST00000516601 115 ntBASIC1.5□□□□□ -2.17
RSPO3Q9BXY4 Y_RNA.702-201ENST00000516843 96 ntBASIC1.5□□□□□ -2.17
RSPO3Q9BXY4 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.5□□□□□ -2.17
RSPO3Q9BXY4 CBX3P7-201ENST00000532876 502 ntBASIC1.5□□□□□ -2.17
RSPO3Q9BXY4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.5□□□□□ -2.17
RSPO3Q9BXY4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.5□□□□□ -2.17
RSPO3Q9BXY4 CPDP1-201ENST00000579660 283 ntBASIC1.5□□□□□ -2.17
RSPO3Q9BXY4 POLR3GP2-201ENST00000588366 668 ntBASIC1.5□□□□□ -2.17
RSPO3Q9BXY4 MTND4P23-201ENST00000447723 1363 ntBASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 Y_RNA.142-201ENST00000363491 102 ntBASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 RNU6-128P-201ENST00000383976 107 ntBASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 RNU6-214P-201ENST00000384130 107 ntBASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 Y_RNA.529-201ENST00000384586 119 ntBASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 RNU6-306P-201ENST00000384617 107 ntBASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 RNU6-748P-201ENST00000384648 107 ntBASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 AL627390.1-201ENST00000396055 340 ntBASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 MIR548F5-201ENST00000408421 86 ntBASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 RNU6-325P-201ENST00000411132 105 ntBASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 UBE2V1P4-201ENST00000425374 344 ntBASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 SNAP23P1-201ENST00000433229 246 ntBASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 MTND4LP16-201ENST00000440828 295 ntBASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 SNRPEP8-201ENST00000442866 260 ntBASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 AC130509.1-201ENST00000464158 433 ntBASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 RPL30P12-201ENST00000474666 353 ntBASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 AL163540.1-201ENST00000485382 386 ntBASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 AC079140.5-201ENST00000507882 310 ntBASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 AK3P2-201ENST00000507976 429 ntBASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 RNU6-277P-201ENST00000516272 106 ntBASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 Y_RNA.691-201ENST00000516611 103 ntBASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 AC105029.1-201ENST00000520250 669 ntBASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 AL359821.1-201ENST00000605519 182 ntBASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 LARP7P1-201ENST00000605576 316 ntBASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 TPTEP1-208ENST00000636884 213 ntBASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
RSPO3Q9BXY4 MTND4P12-201ENST00000498999 1377 ntBASIC1.48□□□□□ -2.17
RSPO3Q9BXY4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
RSPO3Q9BXY4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
RSPO3Q9BXY4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.48□□□□□ -2.17
RSPO3Q9BXY4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.48□□□□□ -2.17
RSPO3Q9BXY4 RNA5SP276-201ENST00000362580 94 ntBASIC1.48□□□□□ -2.17
RSPO3Q9BXY4 RNU1-72P-201ENST00000362976 153 ntBASIC1.48□□□□□ -2.17
RSPO3Q9BXY4 RNU6-527P-201ENST00000363425 104 ntBASIC1.48□□□□□ -2.17
RSPO3Q9BXY4 RNU6-1059P-201ENST00000363752 98 ntBASIC1.48□□□□□ -2.17
RSPO3Q9BXY4 SNORD32A-201ENST00000364805 84 ntBASIC1.48□□□□□ -2.17
RSPO3Q9BXY4 RNU5E-4P-201ENST00000364931 120 ntBASIC1.48□□□□□ -2.17
RSPO3Q9BXY4 RNA5SP190-201ENST00000365222 118 ntBASIC1.48□□□□□ -2.17
RSPO3Q9BXY4 Y_RNA.508-201ENST00000384502 114 ntBASIC1.48□□□□□ -2.17
RSPO3Q9BXY4 MIR544A-201ENST00000384855 91 ntBASIC1.48□□□□□ -2.17
RSPO3Q9BXY4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
RSPO3Q9BXY4 EDDM3CP-201ENST00000415977 425 ntBASIC1.48□□□□□ -2.17
RSPO3Q9BXY4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.48□□□□□ -2.17
RSPO3Q9BXY4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.48□□□□□ -2.17
RSPO3Q9BXY4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.48□□□□□ -2.17
RSPO3Q9BXY4 AC112771.1-201ENST00000463581 102 ntBASIC1.48□□□□□ -2.17
RSPO3Q9BXY4 RPL9P9-202ENST00000466501 579 ntBASIC1.48□□□□□ -2.17
RSPO3Q9BXY4 AC096745.1-201ENST00000509945 370 ntBASIC1.48□□□□□ -2.17
RSPO3Q9BXY4 SNORA25.15-201ENST00000516487 89 ntBASIC1.48□□□□□ -2.17
RSPO3Q9BXY4 AC109479.2-201ENST00000517842 174 ntBASIC1.48□□□□□ -2.17
RSPO3Q9BXY4 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.48□□□□□ -2.17
RSPO3Q9BXY4 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.48□□□□□ -2.17
RSPO3Q9BXY4 RAB11AP2-201ENST00000545905 639 ntBASIC1.48□□□□□ -2.17
RSPO3Q9BXY4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms