Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.51□□□□□ -2.17
RPAP1Q9BWH6 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.51□□□□□ -2.17
RPAP1Q9BWH6 NCOR1P3-201ENST00000420479 303 ntBASIC1.51□□□□□ -2.17
RPAP1Q9BWH6 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.51□□□□□ -2.17
RPAP1Q9BWH6 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.51□□□□□ -2.17
RPAP1Q9BWH6 AC073464.1-201ENST00000429823 534 ntBASIC1.51□□□□□ -2.17
RPAP1Q9BWH6 AC015922.2-201ENST00000435593 184 ntBASIC1.51□□□□□ -2.17
RPAP1Q9BWH6 AC130509.1-201ENST00000464158 433 ntBASIC1.51□□□□□ -2.17
RPAP1Q9BWH6 AC027575.1-201ENST00000481064 460 ntBASIC1.51□□□□□ -2.17
RPAP1Q9BWH6 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.51□□□□□ -2.17
RPAP1Q9BWH6 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
RPAP1Q9BWH6 EIF4A1P12-201ENST00000551910 141 ntBASIC1.51□□□□□ -2.17
RPAP1Q9BWH6 AC090115.3-201ENST00000553218 849 ntBASIC1.51□□□□□ -2.17
RPAP1Q9BWH6 SUB1P4-201ENST00000566062 339 ntBASIC1.51□□□□□ -2.17
RPAP1Q9BWH6 CYP4A27P-201ENST00000567218 190 ntBASIC1.51□□□□□ -2.17
RPAP1Q9BWH6 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.51□□□□□ -2.17
RPAP1Q9BWH6 AC073648.5-201ENST00000603502 305 ntBASIC1.51□□□□□ -2.17
RPAP1Q9BWH6 AC073413.2-201ENST00000604332 360 ntBASIC1.51□□□□□ -2.17
RPAP1Q9BWH6 Z98751.3-201ENST00000604447 521 ntBASIC1.51□□□□□ -2.17
RPAP1Q9BWH6 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.51□□□□□ -2.17
RPAP1Q9BWH6 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.51□□□□□ -2.17
RPAP1Q9BWH6 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
RPAP1Q9BWH6 MIR340-201ENST00000362125 95 ntBASIC1.5□□□□□ -2.17
RPAP1Q9BWH6 SNORA36A-201ENST00000384221 132 ntBASIC1.5□□□□□ -2.17
RPAP1Q9BWH6 RNU6-1158P-201ENST00000391167 107 ntBASIC1.5□□□□□ -2.17
RPAP1Q9BWH6 SDAD1P3-201ENST00000427380 333 ntBASIC1.5□□□□□ -2.17
RPAP1Q9BWH6 MTCO2P19-201ENST00000427513 598 ntBASIC1.5□□□□□ -2.17
RPAP1Q9BWH6 AC002486.1-201ENST00000435098 391 ntBASIC1.5□□□□□ -2.17
RPAP1Q9BWH6 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.5□□□□□ -2.17
RPAP1Q9BWH6 MTCO2P3-201ENST00000442543 421 ntBASIC1.5□□□□□ -2.17
RPAP1Q9BWH6 AC007547.1-201ENST00000462177 490 ntBASIC1.5□□□□□ -2.17
RPAP1Q9BWH6 AC010409.1-201ENST00000487382 476 ntBASIC1.5□□□□□ -2.17
RPAP1Q9BWH6 RNU6-1098P-201ENST00000516772 96 ntBASIC1.5□□□□□ -2.17
RPAP1Q9BWH6 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.5□□□□□ -2.17
RPAP1Q9BWH6 AC021231.3-201ENST00000558497 370 ntBASIC1.5□□□□□ -2.17
RPAP1Q9BWH6 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.5□□□□□ -2.17
RPAP1Q9BWH6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.5□□□□□ -2.17
RPAP1Q9BWH6 AC004223.2-201ENST00000590309 544 ntBASIC1.5□□□□□ -2.17
RPAP1Q9BWH6 AC087683.1-201ENST00000591187 441 ntBASIC1.5□□□□□ -2.17
RPAP1Q9BWH6 AC007684.1-201ENST00000609671 477 ntBASIC1.5□□□□□ -2.17
RPAP1Q9BWH6 HULC.1-201ENST00000612720 240 ntBASIC1.5□□□□□ -2.17
RPAP1Q9BWH6 uc_338.34-201ENST00000617467 174 ntBASIC1.5□□□□□ -2.17
RPAP1Q9BWH6 AC022513.1-201ENST00000624512 117 ntBASIC1.5□□□□□ -2.17
RPAP1Q9BWH6 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.5□□□□□ -2.17
RPAP1Q9BWH6 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
RPAP1Q9BWH6 SNORA12.2-201ENST00000391040 156 ntBASIC1.49□□□□□ -2.17
RPAP1Q9BWH6 AL606923.1-201ENST00000406616 190 ntBASIC1.49□□□□□ -2.17
RPAP1Q9BWH6 AC139712.2-201ENST00000424302 339 ntBASIC1.49□□□□□ -2.17
RPAP1Q9BWH6 MTND1P26-201ENST00000440488 538 ntBASIC1.49□□□□□ -2.17
RPAP1Q9BWH6 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.49□□□□□ -2.17
RPAP1Q9BWH6 RNU7-14P-201ENST00000459331 62 ntBASIC1.49□□□□□ -2.17
RPAP1Q9BWH6 RNU7-138P-201ENST00000459479 64 ntBASIC1.49□□□□□ -2.17
RPAP1Q9BWH6 RNU5F-4P-201ENST00000516581 114 ntBASIC1.49□□□□□ -2.17
RPAP1Q9BWH6 RNU6-567P-201ENST00000516746 107 ntBASIC1.49□□□□□ -2.17
RPAP1Q9BWH6 SNORA44.1-201ENST00000517031 108 ntBASIC1.49□□□□□ -2.17
RPAP1Q9BWH6 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.49□□□□□ -2.17
RPAP1Q9BWH6 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.49□□□□□ -2.17
RPAP1Q9BWH6 AC080078.3-201ENST00000605407 463 ntBASIC1.49□□□□□ -2.17
RPAP1Q9BWH6 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.49□□□□□ -2.17
RPAP1Q9BWH6 AL050343.2-201ENST00000607338 280 ntBASIC1.49□□□□□ -2.17
RPAP1Q9BWH6 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.49□□□□□ -2.17
RPAP1Q9BWH6 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.49□□□□□ -2.17
RPAP1Q9BWH6 MIR6515-201ENST00000619843 57 ntBASIC1.49□□□□□ -2.17
RPAP1Q9BWH6 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.49□□□□□ -2.17
RPAP1Q9BWH6 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
RPAP1Q9BWH6 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.49□□□□□ -2.17
RPAP1Q9BWH6 Y_RNA.255-201ENST00000364581 97 ntBASIC1.48□□□□□ -2.17
RPAP1Q9BWH6 Y_RNA.381-201ENST00000365666 102 ntBASIC1.48□□□□□ -2.17
RPAP1Q9BWH6 MIR30A-201ENST00000385092 71 ntBASIC1.48□□□□□ -2.17
RPAP1Q9BWH6 SNORD73A-201ENST00000386062 65 ntBASIC1.48□□□□□ -2.17
RPAP1Q9BWH6 RNU6-1106P-201ENST00000390845 107 ntBASIC1.48□□□□□ -2.17
RPAP1Q9BWH6 MIR934-201ENST00000401241 83 ntBASIC1.48□□□□□ -2.17
RPAP1Q9BWH6 AL353193.1-201ENST00000421444 268 ntBASIC1.48□□□□□ -2.17
RPAP1Q9BWH6 AL121601.2-201ENST00000438019 707 ntBASIC1.48□□□□□ -2.17
RPAP1Q9BWH6 RPS3AP17-201ENST00000472594 777 ntBASIC1.48□□□□□ -2.17
RPAP1Q9BWH6 CCDC34P1-201ENST00000507441 517 ntBASIC1.48□□□□□ -2.17
RPAP1Q9BWH6 RN7SKP298-201ENST00000515950 94 ntBASIC1.48□□□□□ -2.17
RPAP1Q9BWH6 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.48□□□□□ -2.17
RPAP1Q9BWH6 SNORA31.17-201ENST00000516953 127 ntBASIC1.48□□□□□ -2.17
RPAP1Q9BWH6 AL137100.2-201ENST00000555786 315 ntBASIC1.48□□□□□ -2.17
RPAP1Q9BWH6 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.48□□□□□ -2.17
RPAP1Q9BWH6 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.48□□□□□ -2.17
RPAP1Q9BWH6 AC008269.2-201ENST00000561915 1105 ntBASIC1.48□□□□□ -2.17
RPAP1Q9BWH6 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.48□□□□□ -2.17
RPAP1Q9BWH6 MIR3198-2-201ENST00000577868 80 ntBASIC1.48□□□□□ -2.17
RPAP1Q9BWH6 MIR4424-201ENST00000585257 86 ntBASIC1.48□□□□□ -2.17
RPAP1Q9BWH6 AC005520.5-201ENST00000613926 164 ntBASIC1.48□□□□□ -2.17
RPAP1Q9BWH6 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.48□□□□□ -2.17
RPAP1Q9BWH6 SNORA43.4-201ENST00000629559 138 ntBASIC1.48□□□□□ -2.17
RPAP1Q9BWH6 Y_RNA.296-201ENST00000364930 108 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 SNORA32.2-201ENST00000384049 122 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 Y_RNA.553-201ENST00000384670 102 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 RNA5SP219-201ENST00000390940 113 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 AC012306.1-201ENST00000423267 114 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 MTCO1P19-201ENST00000443487 500 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 MTCO2P18-201ENST00000457151 658 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 RPL31P3-201ENST00000458430 332 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 COX6CP14-201ENST00000469580 174 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms