Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 RNU6-1198P-201ENST00000516904 67 ntBASIC2.84□□□□□ -1.95
TIMP4Q99727 AL137100.2-201ENST00000555786 315 ntBASIC2.84□□□□□ -1.95
TIMP4Q99727 AC021231.3-201ENST00000558497 370 ntBASIC2.84□□□□□ -1.95
TIMP4Q99727 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.84□□□□□ -1.95
TIMP4Q99727 AC090897.2-201ENST00000581715 130 ntBASIC2.84□□□□□ -1.95
TIMP4Q99727 MIR622-201ENST00000638396 96 ntBASIC2.84□□□□□ -1.95
TIMP4Q99727 AC008264.2-201ENST00000610193 3731 ntBASIC2.84□□□□□ -1.96
TIMP4Q99727 AC004944.1-201ENST00000517807 3059 ntBASIC2.84□□□□□ -1.96
TIMP4Q99727 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.84□□□□□ -1.96
TIMP4Q99727 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.83□□□□□ -1.96
TIMP4Q99727 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.83□□□□□ -1.96
TIMP4Q99727 AC092268.1-201ENST00000342691 405 ntBASIC2.83□□□□□ -1.96
TIMP4Q99727 Y_RNA.44-201ENST00000362676 108 ntBASIC2.83□□□□□ -1.96
TIMP4Q99727 Y_RNA.76-201ENST00000362931 109 ntBASIC2.83□□□□□ -1.96
TIMP4Q99727 RNU6-1285P-201ENST00000363480 105 ntBASIC2.83□□□□□ -1.96
TIMP4Q99727 RNU6-873P-201ENST00000363833 107 ntBASIC2.83□□□□□ -1.96
TIMP4Q99727 RNU6-1145P-201ENST00000384246 107 ntBASIC2.83□□□□□ -1.96
TIMP4Q99727 Y_RNA.555-201ENST00000384673 110 ntBASIC2.83□□□□□ -1.96
TIMP4Q99727 SNORA1.3-201ENST00000384676 136 ntBASIC2.83□□□□□ -1.96
TIMP4Q99727 SNORD15B-201ENST00000384714 146 ntBASIC2.83□□□□□ -1.96
TIMP4Q99727 MIR548M-201ENST00000408260 86 ntBASIC2.83□□□□□ -1.96
TIMP4Q99727 RNA5SP390-201ENST00000410191 113 ntBASIC2.83□□□□□ -1.96
TIMP4Q99727 AC012306.1-201ENST00000423267 114 ntBASIC2.83□□□□□ -1.96
TIMP4Q99727 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.83□□□□□ -1.96
TIMP4Q99727 UQCRHP3-201ENST00000451503 251 ntBASIC2.83□□□□□ -1.96
TIMP4Q99727 AC117440.1-201ENST00000474107 571 ntBASIC2.83□□□□□ -1.96
TIMP4Q99727 AC090525.1-201ENST00000479116 478 ntBASIC2.83□□□□□ -1.96
TIMP4Q99727 RPL30P14-201ENST00000482744 348 ntBASIC2.83□□□□□ -1.96
TIMP4Q99727 SNORA40.9-201ENST00000515895 93 ntBASIC2.83□□□□□ -1.96
TIMP4Q99727 RNU2-31P-201ENST00000516954 155 ntBASIC2.83□□□□□ -1.96
TIMP4Q99727 CKS1BP7-201ENST00000522230 235 ntBASIC2.83□□□□□ -1.96
TIMP4Q99727 AC024405.2-202ENST00000532731 184 ntBASIC2.83□□□□□ -1.96
TIMP4Q99727 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.83□□□□□ -1.96
TIMP4Q99727 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.83□□□□□ -1.96
TIMP4Q99727 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.83□□□□□ -1.96
TIMP4Q99727 AL078605.1-201ENST00000603529 500 ntBASIC2.83□□□□□ -1.96
TIMP4Q99727 AC037487.3-201ENST00000606668 112 ntBASIC2.83□□□□□ -1.96
TIMP4Q99727 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.83□□□□□ -1.96
TIMP4Q99727 FTX_2.1-201ENST00000618816 94 ntBASIC2.83□□□□□ -1.96
TIMP4Q99727 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
TIMP4Q99727 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.83□□□□□ -1.96
TIMP4Q99727 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TIMP4Q99727 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.83□□□□□ -1.96
TIMP4Q99727 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TIMP4Q99727 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TIMP4Q99727 GABRG2-229ENST00000641017 3628 ntBASIC2.82□□□□□ -1.96
TIMP4Q99727 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.82□□□□□ -1.96
TIMP4Q99727 ZNF204P-201ENST00000416749 2397 ntBASIC2.82□□□□□ -1.96
TIMP4Q99727 RNU6-740P-201ENST00000364734 105 ntBASIC2.82□□□□□ -1.96
TIMP4Q99727 RNU6-1175P-201ENST00000365200 107 ntBASIC2.82□□□□□ -1.96
TIMP4Q99727 RNU6-622P-201ENST00000384272 103 ntBASIC2.82□□□□□ -1.96
TIMP4Q99727 Y_RNA.595-201ENST00000410403 105 ntBASIC2.82□□□□□ -1.96
TIMP4Q99727 AC023141.4-201ENST00000412031 328 ntBASIC2.82□□□□□ -1.96
TIMP4Q99727 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.82□□□□□ -1.96
TIMP4Q99727 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.82□□□□□ -1.96
TIMP4Q99727 NDUFB4P10-201ENST00000452541 359 ntBASIC2.82□□□□□ -1.96
TIMP4Q99727 RPL23AP3-201ENST00000453844 468 ntBASIC2.82□□□□□ -1.96
TIMP4Q99727 AC107626.1-201ENST00000471084 183 ntBASIC2.82□□□□□ -1.96
TIMP4Q99727 AC092185.1-201ENST00000491371 97 ntBASIC2.82□□□□□ -1.96
TIMP4Q99727 AC008885.1-201ENST00000514930 301 ntBASIC2.82□□□□□ -1.96
TIMP4Q99727 SNORA25.14-201ENST00000516481 132 ntBASIC2.82□□□□□ -1.96
TIMP4Q99727 AC008749.1-201ENST00000597650 306 ntBASIC2.82□□□□□ -1.96
TIMP4Q99727 AC010999.1-201ENST00000611856 324 ntBASIC2.82□□□□□ -1.96
TIMP4Q99727 AL357075.2-201ENST00000614906 189 ntBASIC2.82□□□□□ -1.96
TIMP4Q99727 AC002076.2-201ENST00000617362 122 ntBASIC2.82□□□□□ -1.96
TIMP4Q99727 MIR6076-201ENST00000617521 113 ntBASIC2.82□□□□□ -1.96
TIMP4Q99727 AC006001.4-201ENST00000622243 395 ntBASIC2.82□□□□□ -1.96
TIMP4Q99727 IGHVIII-44-202ENST00000636235 289 ntBASIC2.82□□□□□ -1.96
TIMP4Q99727 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
TIMP4Q99727 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
TIMP4Q99727 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TIMP4Q99727 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.81□□□□□ -1.96
TIMP4Q99727 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.81□□□□□ -1.96
TIMP4Q99727 SNORA25.1-201ENST00000362326 128 ntBASIC2.81□□□□□ -1.96
TIMP4Q99727 RNU6-137P-201ENST00000363680 108 ntBASIC2.81□□□□□ -1.96
TIMP4Q99727 RNU6-326P-201ENST00000365480 107 ntBASIC2.81□□□□□ -1.96
TIMP4Q99727 RNU2-49P-201ENST00000410666 184 ntBASIC2.81□□□□□ -1.96
TIMP4Q99727 RNU6-651P-201ENST00000411040 105 ntBASIC2.81□□□□□ -1.96
TIMP4Q99727 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.81□□□□□ -1.96
TIMP4Q99727 Y_RNA.644-201ENST00000459006 113 ntBASIC2.81□□□□□ -1.96
TIMP4Q99727 SNORA31.1-201ENST00000515993 133 ntBASIC2.81□□□□□ -1.96
TIMP4Q99727 SNORA31.5-201ENST00000516190 133 ntBASIC2.81□□□□□ -1.96
TIMP4Q99727 Y_RNA.674-201ENST00000516362 113 ntBASIC2.81□□□□□ -1.96
TIMP4Q99727 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.81□□□□□ -1.96
TIMP4Q99727 AK6P2-201ENST00000549020 471 ntBASIC2.81□□□□□ -1.96
TIMP4Q99727 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.81□□□□□ -1.96
TIMP4Q99727 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.81□□□□□ -1.96
TIMP4Q99727 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.81□□□□□ -1.96
TIMP4Q99727 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TIMP4Q99727 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TIMP4Q99727 AC103988.1-201ENST00000566382 2177 ntBASIC2.81□□□□□ -1.96
TIMP4Q99727 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.81□□□□□ -1.96
TIMP4Q99727 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.8□□□□□ -1.96
TIMP4Q99727 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
TIMP4Q99727 RNU6-514P-201ENST00000384208 107 ntBASIC2.8□□□□□ -1.96
TIMP4Q99727 RN7SKP220-201ENST00000410611 288 ntBASIC2.8□□□□□ -1.96
TIMP4Q99727 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.8□□□□□ -1.96
TIMP4Q99727 RPS15AP5-201ENST00000436276 388 ntBASIC2.8□□□□□ -1.96
TIMP4Q99727 AC091179.1-201ENST00000461606 579 ntBASIC2.8□□□□□ -1.96
TIMP4Q99727 AC107393.1-201ENST00000512403 346 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 211.9 ms