Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 RNA5SP139-201ENST00000364340 117 ntBASIC2.97□□□□□ -1.93
HAPLN3Q96S86 MIR32-201ENST00000384965 70 ntBASIC2.97□□□□□ -1.93
HAPLN3Q96S86 MIR487A-201ENST00000385009 80 ntBASIC2.97□□□□□ -1.93
HAPLN3Q96S86 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HAPLN3Q96S86 SNORD115-46-201ENST00000390982 71 ntBASIC2.97□□□□□ -1.93
HAPLN3Q96S86 RNU6-1203P-201ENST00000410703 110 ntBASIC2.97□□□□□ -1.93
HAPLN3Q96S86 AC009310.1-201ENST00000414414 451 ntBASIC2.97□□□□□ -1.93
HAPLN3Q96S86 SDAD1P3-201ENST00000427380 333 ntBASIC2.97□□□□□ -1.93
HAPLN3Q96S86 AC025750.2-201ENST00000442609 450 ntBASIC2.97□□□□□ -1.93
HAPLN3Q96S86 MTND4LP30-201ENST00000454092 297 ntBASIC2.97□□□□□ -1.93
HAPLN3Q96S86 TRBVB-201ENST00000477100 408 ntBASIC2.97□□□□□ -1.93
HAPLN3Q96S86 RPS27P26-201ENST00000494583 239 ntBASIC2.97□□□□□ -1.93
HAPLN3Q96S86 RNU6-1012P-201ENST00000516606 109 ntBASIC2.97□□□□□ -1.93
HAPLN3Q96S86 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.97□□□□□ -1.93
HAPLN3Q96S86 AL355877.2-201ENST00000603670 358 ntBASIC2.97□□□□□ -1.93
HAPLN3Q96S86 AC240442.1-201ENST00000616055 283 ntBASIC2.97□□□□□ -1.93
HAPLN3Q96S86 AL450472.1-202ENST00000637286 180 ntBASIC2.97□□□□□ -1.93
HAPLN3Q96S86 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.97□□□□□ -1.93
HAPLN3Q96S86 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HAPLN3Q96S86 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HAPLN3Q96S86 AC108206.1-201ENST00000570186 4159 ntBASIC2.97□□□□□ -1.93
HAPLN3Q96S86 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
HAPLN3Q96S86 SNORD115-32-201ENST00000364079 82 ntBASIC2.96□□□□□ -1.94
HAPLN3Q96S86 RNU6-142P-201ENST00000384019 107 ntBASIC2.96□□□□□ -1.94
HAPLN3Q96S86 RNU6-318P-201ENST00000384283 103 ntBASIC2.96□□□□□ -1.94
HAPLN3Q96S86 MIR512-1-201ENST00000384913 84 ntBASIC2.96□□□□□ -1.94
HAPLN3Q96S86 MIR147B-201ENST00000390185 80 ntBASIC2.96□□□□□ -1.94
HAPLN3Q96S86 RNU1-101P-201ENST00000391171 127 ntBASIC2.96□□□□□ -1.94
HAPLN3Q96S86 AL079342.1-201ENST00000401460 267 ntBASIC2.96□□□□□ -1.94
HAPLN3Q96S86 RN7SKP61-201ENST00000410642 295 ntBASIC2.96□□□□□ -1.94
HAPLN3Q96S86 RNU2-25P-201ENST00000411041 191 ntBASIC2.96□□□□□ -1.94
HAPLN3Q96S86 AC139712.2-201ENST00000424302 339 ntBASIC2.96□□□□□ -1.94
HAPLN3Q96S86 AC078809.1-201ENST00000427601 140 ntBASIC2.96□□□□□ -1.94
HAPLN3Q96S86 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.96□□□□□ -1.94
HAPLN3Q96S86 AC004383.1-201ENST00000438135 289 ntBASIC2.96□□□□□ -1.94
HAPLN3Q96S86 RPS29P6-201ENST00000438196 145 ntBASIC2.96□□□□□ -1.94
HAPLN3Q96S86 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.96□□□□□ -1.94
HAPLN3Q96S86 AC087477.1-201ENST00000465747 340 ntBASIC2.96□□□□□ -1.94
HAPLN3Q96S86 GZMAP1-201ENST00000503054 631 ntBASIC2.96□□□□□ -1.94
HAPLN3Q96S86 Y_RNA.673-201ENST00000516306 88 ntBASIC2.96□□□□□ -1.94
HAPLN3Q96S86 MIR2355-201ENST00000517199 87 ntBASIC2.96□□□□□ -1.94
HAPLN3Q96S86 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.96□□□□□ -1.94
HAPLN3Q96S86 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
HAPLN3Q96S86 AC011373.1-201ENST00000607270 237 ntBASIC2.96□□□□□ -1.94
HAPLN3Q96S86 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
HAPLN3Q96S86 RMST_6.1-201ENST00000611980 203 ntBASIC2.96□□□□□ -1.94
HAPLN3Q96S86 uc_338.14-201ENST00000613162 166 ntBASIC2.96□□□□□ -1.94
HAPLN3Q96S86 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.96□□□□□ -1.94
HAPLN3Q96S86 AC011476.5-201ENST00000615594 130 ntBASIC2.96□□□□□ -1.94
HAPLN3Q96S86 SDR42E1P4-201ENST00000620894 481 ntBASIC2.96□□□□□ -1.94
HAPLN3Q96S86 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.96□□□□□ -1.94
HAPLN3Q96S86 AC002543.1-201ENST00000299783 1954 ntBASIC2.95□□□□□ -1.94
HAPLN3Q96S86 Y_RNA.143-201ENST00000363520 106 ntBASIC2.95□□□□□ -1.94
HAPLN3Q96S86 SNORA36A-201ENST00000384221 132 ntBASIC2.95□□□□□ -1.94
HAPLN3Q96S86 U8.10-201ENST00000384260 133 ntBASIC2.95□□□□□ -1.94
HAPLN3Q96S86 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
HAPLN3Q96S86 RNU2-20P-201ENST00000410425 191 ntBASIC2.95□□□□□ -1.94
HAPLN3Q96S86 AL451074.5-201ENST00000415894 435 ntBASIC2.95□□□□□ -1.94
HAPLN3Q96S86 EIF1P2-201ENST00000428233 350 ntBASIC2.95□□□□□ -1.94
HAPLN3Q96S86 AC016700.2-201ENST00000446011 156 ntBASIC2.95□□□□□ -1.94
HAPLN3Q96S86 RPL39P29-201ENST00000447779 157 ntBASIC2.95□□□□□ -1.94
HAPLN3Q96S86 RPL39P38-201ENST00000467018 153 ntBASIC2.95□□□□□ -1.94
HAPLN3Q96S86 AP000870.1-201ENST00000472927 406 ntBASIC2.95□□□□□ -1.94
HAPLN3Q96S86 RNU6-1023P-201ENST00000516137 106 ntBASIC2.95□□□□□ -1.94
HAPLN3Q96S86 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.95□□□□□ -1.94
HAPLN3Q96S86 RNU6-826P-201ENST00000516827 104 ntBASIC2.95□□□□□ -1.94
HAPLN3Q96S86 AC022868.1-201ENST00000517767 391 ntBASIC2.95□□□□□ -1.94
HAPLN3Q96S86 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.95□□□□□ -1.94
HAPLN3Q96S86 AC023824.2-201ENST00000566185 400 ntBASIC2.95□□□□□ -1.94
HAPLN3Q96S86 MIR4300-201ENST00000581016 96 ntBASIC2.95□□□□□ -1.94
HAPLN3Q96S86 AC006023.1-201ENST00000603944 259 ntBASIC2.95□□□□□ -1.94
HAPLN3Q96S86 AC010900.2-201ENST00000604508 210 ntBASIC2.95□□□□□ -1.94
HAPLN3Q96S86 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.95□□□□□ -1.94
HAPLN3Q96S86 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HAPLN3Q96S86 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
HAPLN3Q96S86 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
HAPLN3Q96S86 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
HAPLN3Q96S86 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HAPLN3Q96S86 RNU6-212P-201ENST00000362642 104 ntBASIC2.94□□□□□ -1.94
HAPLN3Q96S86 RNU6-1010P-201ENST00000362757 107 ntBASIC2.94□□□□□ -1.94
HAPLN3Q96S86 Y_RNA.439-201ENST00000384119 94 ntBASIC2.94□□□□□ -1.94
HAPLN3Q96S86 Y_RNA.552-201ENST00000384665 112 ntBASIC2.94□□□□□ -1.94
HAPLN3Q96S86 AL139095.1-201ENST00000404326 391 ntBASIC2.94□□□□□ -1.94
HAPLN3Q96S86 CYCSP48-201ENST00000417124 323 ntBASIC2.94□□□□□ -1.94
HAPLN3Q96S86 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.94□□□□□ -1.94
HAPLN3Q96S86 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.94□□□□□ -1.94
HAPLN3Q96S86 SNRPGP7-201ENST00000469016 106 ntBASIC2.94□□□□□ -1.94
HAPLN3Q96S86 AC016632.1-201ENST00000503994 196 ntBASIC2.94□□□□□ -1.94
HAPLN3Q96S86 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.94□□□□□ -1.94
HAPLN3Q96S86 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.94□□□□□ -1.94
HAPLN3Q96S86 AC091144.1-201ENST00000519573 138 ntBASIC2.94□□□□□ -1.94
HAPLN3Q96S86 AC115990.1-201ENST00000526957 301 ntBASIC2.94□□□□□ -1.94
HAPLN3Q96S86 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.94□□□□□ -1.94
HAPLN3Q96S86 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.94□□□□□ -1.94
HAPLN3Q96S86 AC105137.2-201ENST00000569073 466 ntBASIC2.94□□□□□ -1.94
HAPLN3Q96S86 MIR5571-201ENST00000577998 113 ntBASIC2.94□□□□□ -1.94
HAPLN3Q96S86 MIR4659A-201ENST00000580269 81 ntBASIC2.94□□□□□ -1.94
HAPLN3Q96S86 ELOCP29-201ENST00000588193 334 ntBASIC2.94□□□□□ -1.94
HAPLN3Q96S86 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
HAPLN3Q96S86 RPS15AP11-201ENST00000594193 385 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms