Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 RNU1-76P-201ENST00000362903 159 ntBASIC2.29□□□□□ -2.04
NR1H4Q96RI1 SNORD115-3-201ENST00000363100 82 ntBASIC2.29□□□□□ -2.04
NR1H4Q96RI1 Y_RNA.99-201ENST00000363138 105 ntBASIC2.29□□□□□ -2.04
NR1H4Q96RI1 RNU6-137P-201ENST00000363680 108 ntBASIC2.29□□□□□ -2.04
NR1H4Q96RI1 RNU6-1188P-201ENST00000363795 107 ntBASIC2.29□□□□□ -2.04
NR1H4Q96RI1 SNORD115-8-201ENST00000363856 82 ntBASIC2.29□□□□□ -2.04
NR1H4Q96RI1 Y_RNA.259-201ENST00000364619 101 ntBASIC2.29□□□□□ -2.04
NR1H4Q96RI1 SNORD115-38-201ENST00000365037 82 ntBASIC2.29□□□□□ -2.04
NR1H4Q96RI1 Y_RNA.404-201ENST00000383978 102 ntBASIC2.29□□□□□ -2.04
NR1H4Q96RI1 Y_RNA.405-201ENST00000383979 100 ntBASIC2.29□□□□□ -2.04
NR1H4Q96RI1 Y_RNA.451-201ENST00000384200 100 ntBASIC2.29□□□□□ -2.04
NR1H4Q96RI1 RNU6-17P-201ENST00000384245 107 ntBASIC2.29□□□□□ -2.04
NR1H4Q96RI1 RNU6-18P-201ENST00000384527 107 ntBASIC2.29□□□□□ -2.04
NR1H4Q96RI1 Y_RNA.524-201ENST00000384564 100 ntBASIC2.29□□□□□ -2.04
NR1H4Q96RI1 Y_RNA.561-201ENST00000384694 100 ntBASIC2.29□□□□□ -2.04
NR1H4Q96RI1 MT-TD-201ENST00000387419 68 ntBASIC2.29□□□□□ -2.04
NR1H4Q96RI1 MTCYBP10-201ENST00000424905 650 ntBASIC2.29□□□□□ -2.04
NR1H4Q96RI1 AL353997.1-201ENST00000432936 108 ntBASIC2.29□□□□□ -2.04
NR1H4Q96RI1 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.29□□□□□ -2.04
NR1H4Q96RI1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.29□□□□□ -2.04
NR1H4Q96RI1 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.29□□□□□ -2.04
NR1H4Q96RI1 HMGN2P18-201ENST00000450680 270 ntBASIC2.29□□□□□ -2.04
NR1H4Q96RI1 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.29□□□□□ -2.04
NR1H4Q96RI1 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.29□□□□□ -2.04
NR1H4Q96RI1 RNA5SP384-201ENST00000516615 116 ntBASIC2.29□□□□□ -2.04
NR1H4Q96RI1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.29□□□□□ -2.04
NR1H4Q96RI1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.29□□□□□ -2.04
NR1H4Q96RI1 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.29□□□□□ -2.04
NR1H4Q96RI1 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.29□□□□□ -2.04
NR1H4Q96RI1 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.29□□□□□ -2.04
NR1H4Q96RI1 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.29□□□□□ -2.04
NR1H4Q96RI1 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
NR1H4Q96RI1 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
NR1H4Q96RI1 SNORD31B-201ENST00000364977 69 ntBASIC2.28□□□□□ -2.04
NR1H4Q96RI1 RNU6-245P-201ENST00000384020 107 ntBASIC2.28□□□□□ -2.04
NR1H4Q96RI1 RNU6-331P-201ENST00000384724 107 ntBASIC2.28□□□□□ -2.04
NR1H4Q96RI1 MTCYBP4-201ENST00000401524 249 ntBASIC2.28□□□□□ -2.04
NR1H4Q96RI1 AL138827.1-201ENST00000402666 306 ntBASIC2.28□□□□□ -2.04
NR1H4Q96RI1 U3.40-201ENST00000408706 208 ntBASIC2.28□□□□□ -2.04
NR1H4Q96RI1 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.28□□□□□ -2.04
NR1H4Q96RI1 AC007098.1-201ENST00000420122 367 ntBASIC2.28□□□□□ -2.04
NR1H4Q96RI1 AC087499.2-201ENST00000432861 149 ntBASIC2.28□□□□□ -2.04
NR1H4Q96RI1 RPL23AP83-201ENST00000434984 473 ntBASIC2.28□□□□□ -2.04
NR1H4Q96RI1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.28□□□□□ -2.04
NR1H4Q96RI1 TOMM22P6-201ENST00000465035 409 ntBASIC2.28□□□□□ -2.04
NR1H4Q96RI1 FGF7P4-201ENST00000509595 295 ntBASIC2.28□□□□□ -2.04
NR1H4Q96RI1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.28□□□□□ -2.04
NR1H4Q96RI1 SCARNA16.2-201ENST00000516520 172 ntBASIC2.28□□□□□ -2.04
NR1H4Q96RI1 RNU7-193P-201ENST00000516723 65 ntBASIC2.28□□□□□ -2.04
NR1H4Q96RI1 MIR514B-201ENST00000516774 80 ntBASIC2.28□□□□□ -2.04
NR1H4Q96RI1 RNU6-1213P-201ENST00000517075 94 ntBASIC2.28□□□□□ -2.04
NR1H4Q96RI1 RNU6-264P-201ENST00000517134 104 ntBASIC2.28□□□□□ -2.04
NR1H4Q96RI1 AC233702.2-202ENST00000562547 291 ntBASIC2.28□□□□□ -2.04
NR1H4Q96RI1 FRG2DP-202ENST00000566967 323 ntBASIC2.28□□□□□ -2.04
NR1H4Q96RI1 MIR4529-201ENST00000578110 78 ntBASIC2.28□□□□□ -2.04
NR1H4Q96RI1 MIR5195-201ENST00000583555 115 ntBASIC2.28□□□□□ -2.04
NR1H4Q96RI1 MIR4448-201ENST00000584360 86 ntBASIC2.28□□□□□ -2.04
NR1H4Q96RI1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.28□□□□□ -2.04
NR1H4Q96RI1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
NR1H4Q96RI1 Y_RNA.132-201ENST00000363421 102 ntBASIC2.27□□□□□ -2.05
NR1H4Q96RI1 RNU6-280P-201ENST00000364145 104 ntBASIC2.27□□□□□ -2.05
NR1H4Q96RI1 RNU1-112P-201ENST00000364401 164 ntBASIC2.27□□□□□ -2.05
NR1H4Q96RI1 MIR491-201ENST00000384877 84 ntBASIC2.27□□□□□ -2.05
NR1H4Q96RI1 MIR1262-201ENST00000408276 93 ntBASIC2.27□□□□□ -2.05
NR1H4Q96RI1 RNA5SP21-201ENST00000410917 96 ntBASIC2.27□□□□□ -2.05
NR1H4Q96RI1 AC096664.2-201ENST00000411843 406 ntBASIC2.27□□□□□ -2.05
NR1H4Q96RI1 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.27□□□□□ -2.05
NR1H4Q96RI1 MTCO2P27-201ENST00000420740 428 ntBASIC2.27□□□□□ -2.05
NR1H4Q96RI1 COTL1P1-201ENST00000422309 375 ntBASIC2.27□□□□□ -2.05
NR1H4Q96RI1 MTCO3P29-201ENST00000432119 779 ntBASIC2.27□□□□□ -2.05
NR1H4Q96RI1 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.27□□□□□ -2.05
NR1H4Q96RI1 AC009237.7-201ENST00000447357 229 ntBASIC2.27□□□□□ -2.05
NR1H4Q96RI1 RPL30P15-201ENST00000457129 321 ntBASIC2.27□□□□□ -2.05
NR1H4Q96RI1 RPS27P21-201ENST00000486977 252 ntBASIC2.27□□□□□ -2.05
NR1H4Q96RI1 RPL17P19-201ENST00000489069 552 ntBASIC2.27□□□□□ -2.05
NR1H4Q96RI1 AC097473.1-201ENST00000508142 408 ntBASIC2.27□□□□□ -2.05
NR1H4Q96RI1 ATP5EP1-201ENST00000510257 156 ntBASIC2.27□□□□□ -2.05
NR1H4Q96RI1 RNU6-277P-201ENST00000516272 106 ntBASIC2.27□□□□□ -2.05
NR1H4Q96RI1 RNU6-58P-201ENST00000517143 103 ntBASIC2.27□□□□□ -2.05
NR1H4Q96RI1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.27□□□□□ -2.05
NR1H4Q96RI1 APOOP3-201ENST00000536787 586 ntBASIC2.27□□□□□ -2.05
NR1H4Q96RI1 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.27□□□□□ -2.05
NR1H4Q96RI1 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.27□□□□□ -2.05
NR1H4Q96RI1 RPS3AP23-202ENST00000574601 686 ntBASIC2.27□□□□□ -2.05
NR1H4Q96RI1 AL355375.2-201ENST00000574825 175 ntBASIC2.27□□□□□ -2.05
NR1H4Q96RI1 AC005014.2-201ENST00000607795 599 ntBASIC2.27□□□□□ -2.05
NR1H4Q96RI1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.27□□□□□ -2.05
NR1H4Q96RI1 AC130454.1-201ENST00000622948 401 ntBASIC2.27□□□□□ -2.05
NR1H4Q96RI1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
NR1H4Q96RI1 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.27□□□□□ -2.05
NR1H4Q96RI1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
NR1H4Q96RI1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.27□□□□□ -2.05
NR1H4Q96RI1 MTND4P1-201ENST00000457501 1466 ntBASIC2.26□□□□□ -2.05
NR1H4Q96RI1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
NR1H4Q96RI1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.26□□□□□ -2.05
NR1H4Q96RI1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
NR1H4Q96RI1 Y_RNA.529-201ENST00000384586 119 ntBASIC2.26□□□□□ -2.05
NR1H4Q96RI1 RNU6-160P-201ENST00000384591 107 ntBASIC2.26□□□□□ -2.05
NR1H4Q96RI1 HMGN2P39-201ENST00000398005 273 ntBASIC2.26□□□□□ -2.05
NR1H4Q96RI1 MIR300-201ENST00000401138 83 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 195.7 ms