Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC073308.1-201ENST00000623696 305 ntBASIC3.94□□□□□ -1.78
SYNGAP1Q96PV0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SYNGAP1Q96PV0 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.93□□□□□ -1.78
SYNGAP1Q96PV0 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.93□□□□□ -1.78
SYNGAP1Q96PV0 AC099654.7-201ENST00000635788 2127 ntBASIC3.93□□□□□ -1.78
SYNGAP1Q96PV0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.93□□□□□ -1.78
SYNGAP1Q96PV0 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SYNGAP1Q96PV0 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SYNGAP1Q96PV0 RNU6-283P-201ENST00000364788 107 ntBASIC3.93□□□□□ -1.78
SYNGAP1Q96PV0 RNA5SP189-201ENST00000364920 115 ntBASIC3.93□□□□□ -1.78
SYNGAP1Q96PV0 RNU6-81P-201ENST00000365608 104 ntBASIC3.93□□□□□ -1.78
SYNGAP1Q96PV0 Y_RNA.435-201ENST00000384095 112 ntBASIC3.93□□□□□ -1.78
SYNGAP1Q96PV0 Z98941.1-201ENST00000407764 100 ntBASIC3.93□□□□□ -1.78
SYNGAP1Q96PV0 RNU5E-9P-201ENST00000411164 104 ntBASIC3.93□□□□□ -1.78
SYNGAP1Q96PV0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.93□□□□□ -1.78
SYNGAP1Q96PV0 AC140059.1-201ENST00000489238 361 ntBASIC3.93□□□□□ -1.78
SYNGAP1Q96PV0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.93□□□□□ -1.78
SYNGAP1Q96PV0 AC078817.1-201ENST00000492623 435 ntBASIC3.93□□□□□ -1.78
SYNGAP1Q96PV0 CUL1P1-201ENST00000509510 2425 ntBASIC3.93□□□□□ -1.78
SYNGAP1Q96PV0 FCF1P8-201ENST00000510322 597 ntBASIC3.93□□□□□ -1.78
SYNGAP1Q96PV0 MIR5680-201ENST00000577577 84 ntBASIC3.93□□□□□ -1.78
SYNGAP1Q96PV0 MIR3162-201ENST00000581818 82 ntBASIC3.93□□□□□ -1.78
SYNGAP1Q96PV0 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.93□□□□□ -1.78
SYNGAP1Q96PV0 RNVU1-4-201ENST00000612985 164 ntBASIC3.93□□□□□ -1.78
SYNGAP1Q96PV0 MIR3199-2-201ENST00000636243 86 ntBASIC3.93□□□□□ -1.78
SYNGAP1Q96PV0 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SYNGAP1Q96PV0 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.92□□□□□ -1.78
SYNGAP1Q96PV0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SYNGAP1Q96PV0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SYNGAP1Q96PV0 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SYNGAP1Q96PV0 AL109809.4-201ENST00000603520 2185 ntBASIC3.92□□□□□ -1.78
SYNGAP1Q96PV0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SYNGAP1Q96PV0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SYNGAP1Q96PV0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SYNGAP1Q96PV0 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
SYNGAP1Q96PV0 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.92□□□□□ -1.78
SYNGAP1Q96PV0 RNU6-1310P-201ENST00000384153 107 ntBASIC3.92□□□□□ -1.78
SYNGAP1Q96PV0 MIR320B2-201ENST00000408479 138 ntBASIC3.92□□□□□ -1.78
SYNGAP1Q96PV0 BMS1P22-201ENST00000414726 313 ntBASIC3.92□□□□□ -1.78
SYNGAP1Q96PV0 AC006989.1-201ENST00000427212 131 ntBASIC3.92□□□□□ -1.78
SYNGAP1Q96PV0 AC091179.3-201ENST00000474761 144 ntBASIC3.92□□□□□ -1.78
SYNGAP1Q96PV0 RNU6-62P-201ENST00000516526 102 ntBASIC3.92□□□□□ -1.78
SYNGAP1Q96PV0 RNA5SP309-201ENST00000516670 106 ntBASIC3.92□□□□□ -1.78
SYNGAP1Q96PV0 AC021739.1-201ENST00000559631 174 ntBASIC3.92□□□□□ -1.78
SYNGAP1Q96PV0 AC006380.1-201ENST00000603598 186 ntBASIC3.92□□□□□ -1.78
SYNGAP1Q96PV0 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.92□□□□□ -1.78
SYNGAP1Q96PV0 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 Z83843.1-201ENST00000604070 3685 ntBASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 AL365361.1-201ENST00000566942 3481 ntBASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 RNU6-653P-201ENST00000363074 106 ntBASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 Y_RNA.182-201ENST00000363880 111 ntBASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 SNORD50B-201ENST00000364995 70 ntBASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 Y_RNA.488-201ENST00000384403 102 ntBASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 RNU2-51P-201ENST00000410708 197 ntBASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 YPEL5P1-201ENST00000419731 367 ntBASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 HMGN2P10-201ENST00000448085 265 ntBASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 RPS20P10-201ENST00000451209 253 ntBASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 ACA59.2-201ENST00000517061 156 ntBASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 CKS1BP7-201ENST00000522230 235 ntBASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 MIR5692C2-201ENST00000577959 77 ntBASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 MIR5004-201ENST00000579078 107 ntBASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 AL033523.1-201ENST00000605153 153 ntBASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 AC022336.2-201ENST00000568966 2538 ntBASIC3.91□□□□□ -1.78
SYNGAP1Q96PV0 OTUD4P1-201ENST00000237841 3067 ntBASIC3.9□□□□□ -1.78
SYNGAP1Q96PV0 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.9□□□□□ -1.79
SYNGAP1Q96PV0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.9□□□□□ -1.79
SYNGAP1Q96PV0 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.9□□□□□ -1.79
SYNGAP1Q96PV0 AC073073.2-201ENST00000609827 2578 ntBASIC3.9□□□□□ -1.79
SYNGAP1Q96PV0 Y_RNA.7-201ENST00000362352 102 ntBASIC3.9□□□□□ -1.79
SYNGAP1Q96PV0 RNU6-1290P-201ENST00000362957 109 ntBASIC3.9□□□□□ -1.79
SYNGAP1Q96PV0 Y_RNA.441-201ENST00000384123 112 ntBASIC3.9□□□□□ -1.79
SYNGAP1Q96PV0 RNU6-1154P-201ENST00000391001 104 ntBASIC3.9□□□□□ -1.79
SYNGAP1Q96PV0 RNU6-1248P-201ENST00000391096 64 ntBASIC3.9□□□□□ -1.79
SYNGAP1Q96PV0 AL133475.1-201ENST00000404414 305 ntBASIC3.9□□□□□ -1.79
SYNGAP1Q96PV0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.9□□□□□ -1.79
SYNGAP1Q96PV0 AC003685.2-201ENST00000422795 395 ntBASIC3.9□□□□□ -1.79
SYNGAP1Q96PV0 AP000873.1-201ENST00000463987 400 ntBASIC3.9□□□□□ -1.79
SYNGAP1Q96PV0 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.9□□□□□ -1.79
SYNGAP1Q96PV0 AC005921.1-201ENST00000510589 286 ntBASIC3.9□□□□□ -1.79
SYNGAP1Q96PV0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.9□□□□□ -1.79
SYNGAP1Q96PV0 AL008718.3-201ENST00000610217 321 ntBASIC3.9□□□□□ -1.79
SYNGAP1Q96PV0 SNORD98-201ENST00000636377 67 ntBASIC3.9□□□□□ -1.79
SYNGAP1Q96PV0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SYNGAP1Q96PV0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
SYNGAP1Q96PV0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
SYNGAP1Q96PV0 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.89□□□□□ -1.79
SYNGAP1Q96PV0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SYNGAP1Q96PV0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
SYNGAP1Q96PV0 RNU6-1272P-201ENST00000362776 107 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms