Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.09□□□□□ -2.4
AP1S3Q96PC3 MIR5697-201ENST00000578045 78 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 AC011195.1-201ENST00000578177 177 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 MIR4307-201ENST00000582802 84 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 Z99289.3-201ENST00000605586 594 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 RNU6-6P-201ENST00000606623 107 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 AL096861.1-201ENST00000610899 123 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 MIR6504-201ENST00000613520 61 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.09□□□□□ -2.4
AP1S3Q96PC3 AL157786.1-207ENST00000627771 695 ntBASIC0.09□□□□□ -2.4
AP1S3Q96PC3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
AP1S3Q96PC3 MIR103A1-201ENST00000362165 78 ntBASIC0.08□□□□□ -2.4
AP1S3Q96PC3 RNU6-349P-201ENST00000362402 107 ntBASIC0.08□□□□□ -2.4
AP1S3Q96PC3 RNU6-552P-201ENST00000362869 119 ntBASIC0.08□□□□□ -2.4
AP1S3Q96PC3 U3.4-201ENST00000363352 213 ntBASIC0.08□□□□□ -2.4
AP1S3Q96PC3 RNU6-39P-201ENST00000384344 107 ntBASIC0.08□□□□□ -2.4
AP1S3Q96PC3 SNORA16.2-201ENST00000390991 127 ntBASIC0.08□□□□□ -2.4
AP1S3Q96PC3 RNA5SP299-201ENST00000391203 116 ntBASIC0.08□□□□□ -2.4
AP1S3Q96PC3 AL136310.1-201ENST00000404926 654 ntBASIC0.08□□□□□ -2.4
AP1S3Q96PC3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.08□□□□□ -2.4
AP1S3Q96PC3 RNA5SP222-201ENST00000411039 105 ntBASIC0.08□□□□□ -2.4
AP1S3Q96PC3 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.08□□□□□ -2.4
AP1S3Q96PC3 AL445305.1-201ENST00000432577 575 ntBASIC0.08□□□□□ -2.4
AP1S3Q96PC3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.08□□□□□ -2.4
AP1S3Q96PC3 AL162725.1-201ENST00000435405 301 ntBASIC0.08□□□□□ -2.4
AP1S3Q96PC3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.08□□□□□ -2.4
AP1S3Q96PC3 AC116353.3-201ENST00000511215 249 ntBASIC0.08□□□□□ -2.4
AP1S3Q96PC3 RNU6-237P-201ENST00000515985 71 ntBASIC0.08□□□□□ -2.4
AP1S3Q96PC3 AC087894.1-201ENST00000538359 518 ntBASIC0.08□□□□□ -2.4
AP1S3Q96PC3 AC009712.1-201ENST00000564938 316 ntBASIC0.08□□□□□ -2.4
AP1S3Q96PC3 AC023827.1-201ENST00000569247 97 ntBASIC0.08□□□□□ -2.4
AP1S3Q96PC3 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.08□□□□□ -2.4
AP1S3Q96PC3 MIR4711-201ENST00000578274 70 ntBASIC0.08□□□□□ -2.4
AP1S3Q96PC3 AC025627.3-201ENST00000582078 182 ntBASIC0.08□□□□□ -2.4
AP1S3Q96PC3 AC131055.1-201ENST00000584626 316 ntBASIC0.08□□□□□ -2.4
AP1S3Q96PC3 RNU6-88P-201ENST00000606801 100 ntBASIC0.08□□□□□ -2.4
AP1S3Q96PC3 AC097065.2-201ENST00000608159 533 ntBASIC0.08□□□□□ -2.4
AP1S3Q96PC3 AL121895.2-201ENST00000619558 447 ntBASIC0.08□□□□□ -2.4
AP1S3Q96PC3 AL513423.1-201ENST00000621695 132 ntBASIC0.08□□□□□ -2.4
AP1S3Q96PC3 AC006001.4-201ENST00000622243 395 ntBASIC0.08□□□□□ -2.4
AP1S3Q96PC3 RNU1-133P-201ENST00000364867 167 ntBASIC0.07□□□□□ -2.4
AP1S3Q96PC3 SNORD116.1-201ENST00000365628 92 ntBASIC0.07□□□□□ -2.4
AP1S3Q96PC3 SNORA36.2-201ENST00000384004 127 ntBASIC0.07□□□□□ -2.4
AP1S3Q96PC3 RN7SKP200-201ENST00000410564 320 ntBASIC0.07□□□□□ -2.4
AP1S3Q96PC3 RNU6-1245P-201ENST00000411130 106 ntBASIC0.07□□□□□ -2.4
AP1S3Q96PC3 AC016909.1-201ENST00000415916 166 ntBASIC0.07□□□□□ -2.4
AP1S3Q96PC3 MRPS18CP6-201ENST00000423587 223 ntBASIC0.07□□□□□ -2.4
AP1S3Q96PC3 AL133396.1-201ENST00000432048 687 ntBASIC0.07□□□□□ -2.4
AP1S3Q96PC3 RPL23AP50-201ENST00000434149 455 ntBASIC0.07□□□□□ -2.4
AP1S3Q96PC3 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.07□□□□□ -2.4
AP1S3Q96PC3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.07□□□□□ -2.4
AP1S3Q96PC3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.07□□□□□ -2.4
AP1S3Q96PC3 AC245047.8-201ENST00000456455 284 ntBASIC0.07□□□□□ -2.4
AP1S3Q96PC3 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.07□□□□□ -2.4
AP1S3Q96PC3 RNU6-377P-201ENST00000515965 102 ntBASIC0.07□□□□□ -2.4
AP1S3Q96PC3 AC007834.2-201ENST00000536310 343 ntBASIC0.07□□□□□ -2.4
AP1S3Q96PC3 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.07□□□□□ -2.4
AP1S3Q96PC3 MIR4452-201ENST00000583004 71 ntBASIC0.07□□□□□ -2.4
AP1S3Q96PC3 AC005520.5-201ENST00000613926 164 ntBASIC0.07□□□□□ -2.4
AP1S3Q96PC3 SNORA43.4-201ENST00000629559 138 ntBASIC0.07□□□□□ -2.4
AP1S3Q96PC3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.07□□□□□ -2.4
AP1S3Q96PC3 RNU6-975P-201ENST00000384296 105 ntBASIC0.06□□□□□ -2.4
AP1S3Q96PC3 RNU6-163P-201ENST00000384396 106 ntBASIC0.06□□□□□ -2.4
AP1S3Q96PC3 ERHP2-201ENST00000402323 299 ntBASIC0.06□□□□□ -2.4
AP1S3Q96PC3 AL034345.1-201ENST00000407768 123 ntBASIC0.06□□□□□ -2.4
AP1S3Q96PC3 AL353777.1-201ENST00000425552 326 ntBASIC0.06□□□□□ -2.4
AP1S3Q96PC3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.06□□□□□ -2.4
AP1S3Q96PC3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.06□□□□□ -2.4
AP1S3Q96PC3 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.06□□□□□ -2.4
AP1S3Q96PC3 NFU1P2-201ENST00000448700 469 ntBASIC0.06□□□□□ -2.4
AP1S3Q96PC3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.06□□□□□ -2.4
AP1S3Q96PC3 RNU7-51P-201ENST00000516560 62 ntBASIC0.06□□□□□ -2.4
AP1S3Q96PC3 RNU6-201P-201ENST00000517100 61 ntBASIC0.06□□□□□ -2.4
AP1S3Q96PC3 AC024995.1-201ENST00000523014 93 ntBASIC0.06□□□□□ -2.4
AP1S3Q96PC3 AP003049.1-201ENST00000529418 457 ntBASIC0.06□□□□□ -2.4
AP1S3Q96PC3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.06□□□□□ -2.4
AP1S3Q96PC3 MIR4431-201ENST00000579990 94 ntBASIC0.06□□□□□ -2.4
AP1S3Q96PC3 MIR3192-201ENST00000584920 77 ntBASIC0.06□□□□□ -2.4
AP1S3Q96PC3 AL356157.2-201ENST00000605122 111 ntBASIC0.06□□□□□ -2.4
AP1S3Q96PC3 AL139286.2-201ENST00000606838 396 ntBASIC0.06□□□□□ -2.4
AP1S3Q96PC3 AL391903.3-201ENST00000612158 163 ntBASIC0.06□□□□□ -2.4
AP1S3Q96PC3 RNU6-199P-201ENST00000362954 107 ntBASIC0.05□□□□□ -2.4
AP1S3Q96PC3 SNORD56.2-201ENST00000363242 71 ntBASIC0.05□□□□□ -2.4
AP1S3Q96PC3 RNU4-56P-201ENST00000364700 142 ntBASIC0.05□□□□□ -2.4
AP1S3Q96PC3 MIR549A-201ENST00000385268 96 ntBASIC0.05□□□□□ -2.4
AP1S3Q96PC3 RNA5SP247-201ENST00000411181 105 ntBASIC0.05□□□□□ -2.4
AP1S3Q96PC3 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.05□□□□□ -2.4
AP1S3Q96PC3 SNAP23P1-201ENST00000433229 246 ntBASIC0.05□□□□□ -2.4
AP1S3Q96PC3 AC093850.1-201ENST00000454121 251 ntBASIC0.05□□□□□ -2.4
AP1S3Q96PC3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.05□□□□□ -2.4
AP1S3Q96PC3 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.05□□□□□ -2.4
AP1S3Q96PC3 SNORA70.12-201ENST00000516084 153 ntBASIC0.05□□□□□ -2.4
AP1S3Q96PC3 RNU6-948P-201ENST00000516374 107 ntBASIC0.05□□□□□ -2.4
AP1S3Q96PC3 RNU2-34P-201ENST00000516534 121 ntBASIC0.05□□□□□ -2.4
AP1S3Q96PC3 RNA5SP337-201ENST00000517007 109 ntBASIC0.05□□□□□ -2.4
AP1S3Q96PC3 RNU6-1003P-201ENST00000517099 105 ntBASIC0.05□□□□□ -2.4
AP1S3Q96PC3 RNU7-128P-201ENST00000517247 62 ntBASIC0.05□□□□□ -2.4
AP1S3Q96PC3 AC109810.1-201ENST00000534066 224 ntBASIC0.05□□□□□ -2.4
AP1S3Q96PC3 Z99497.2-201ENST00000603634 310 ntBASIC0.05□□□□□ -2.4
AP1S3Q96PC3 AC013244.3-201ENST00000605614 388 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 157 ms