Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 CASC19-280ENST00000642102 1351 ntBASIC1.34□□□□□ -2.19
LINC00477Q96M19 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
LINC00477Q96M19 Y_RNA.48-201ENST00000362710 103 ntBASIC1.34□□□□□ -2.19
LINC00477Q96M19 RNU5B-2P-201ENST00000363036 113 ntBASIC1.34□□□□□ -2.19
LINC00477Q96M19 U8.2-201ENST00000363156 134 ntBASIC1.34□□□□□ -2.19
LINC00477Q96M19 RNU6-234P-201ENST00000365229 104 ntBASIC1.34□□□□□ -2.19
LINC00477Q96M19 RNU6-842P-201ENST00000384269 107 ntBASIC1.34□□□□□ -2.19
LINC00477Q96M19 MIR521-1-201ENST00000384902 87 ntBASIC1.34□□□□□ -2.19
LINC00477Q96M19 MIR23A-201ENST00000385245 73 ntBASIC1.34□□□□□ -2.19
LINC00477Q96M19 RNU2-41P-201ENST00000410991 178 ntBASIC1.34□□□□□ -2.19
LINC00477Q96M19 AC006026.2-201ENST00000457376 180 ntBASIC1.34□□□□□ -2.19
LINC00477Q96M19 RNU6-1037P-201ENST00000459571 107 ntBASIC1.34□□□□□ -2.19
LINC00477Q96M19 RNU6-329P-201ENST00000459618 107 ntBASIC1.34□□□□□ -2.19
LINC00477Q96M19 AC130509.1-201ENST00000464158 433 ntBASIC1.34□□□□□ -2.19
LINC00477Q96M19 TRBV12-1-201ENST00000479785 344 ntBASIC1.34□□□□□ -2.19
LINC00477Q96M19 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.34□□□□□ -2.19
LINC00477Q96M19 RNU6-991P-201ENST00000516168 107 ntBASIC1.34□□□□□ -2.19
LINC00477Q96M19 Y_RNA.682-201ENST00000516457 100 ntBASIC1.34□□□□□ -2.19
LINC00477Q96M19 AF235103.2-201ENST00000525753 346 ntBASIC1.34□□□□□ -2.19
LINC00477Q96M19 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.34□□□□□ -2.19
LINC00477Q96M19 AC091544.4-201ENST00000555268 342 ntBASIC1.34□□□□□ -2.19
LINC00477Q96M19 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.34□□□□□ -2.19
LINC00477Q96M19 AL158827.2-201ENST00000602494 330 ntBASIC1.34□□□□□ -2.19
LINC00477Q96M19 AL691447.3-201ENST00000635020 330 ntBASIC1.34□□□□□ -2.19
LINC00477Q96M19 AC009541.1-201ENST00000438279 2662 ntBASIC1.34□□□□□ -2.2
LINC00477Q96M19 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.33□□□□□ -2.2
LINC00477Q96M19 RNU6-562P-201ENST00000362731 107 ntBASIC1.33□□□□□ -2.2
LINC00477Q96M19 RNU6-227P-201ENST00000362865 103 ntBASIC1.33□□□□□ -2.2
LINC00477Q96M19 SNORD115-3-201ENST00000363100 82 ntBASIC1.33□□□□□ -2.2
LINC00477Q96M19 Y_RNA.111-201ENST00000363248 100 ntBASIC1.33□□□□□ -2.2
LINC00477Q96M19 SNORD114-6-201ENST00000364393 72 ntBASIC1.33□□□□□ -2.2
LINC00477Q96M19 RNU6-1164P-201ENST00000364428 107 ntBASIC1.33□□□□□ -2.2
LINC00477Q96M19 Y_RNA.500-201ENST00000384466 111 ntBASIC1.33□□□□□ -2.2
LINC00477Q96M19 MIR517A-201ENST00000385001 87 ntBASIC1.33□□□□□ -2.2
LINC00477Q96M19 MIR29C-201ENST00000385231 88 ntBASIC1.33□□□□□ -2.2
LINC00477Q96M19 RNA5SP465-201ENST00000391195 109 ntBASIC1.33□□□□□ -2.2
LINC00477Q96M19 MTCYBP2-201ENST00000407745 171 ntBASIC1.33□□□□□ -2.2
LINC00477Q96M19 RNU6-1304P-201ENST00000411374 106 ntBASIC1.33□□□□□ -2.2
LINC00477Q96M19 ARL5AP1-201ENST00000418991 388 ntBASIC1.33□□□□□ -2.2
LINC00477Q96M19 BX510359.4-201ENST00000423750 193 ntBASIC1.33□□□□□ -2.2
LINC00477Q96M19 USP9YP30-201ENST00000430729 455 ntBASIC1.33□□□□□ -2.2
LINC00477Q96M19 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC00477Q96M19 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC00477Q96M19 PRELID3BP1-201ENST00000457142 540 ntBASIC1.33□□□□□ -2.2
LINC00477Q96M19 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.33□□□□□ -2.2
LINC00477Q96M19 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC00477Q96M19 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC00477Q96M19 AC096745.1-201ENST00000509945 370 ntBASIC1.33□□□□□ -2.2
LINC00477Q96M19 RNU6-120P-201ENST00000516077 103 ntBASIC1.33□□□□□ -2.2
LINC00477Q96M19 RNA5SP454-201ENST00000517231 127 ntBASIC1.33□□□□□ -2.2
LINC00477Q96M19 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC00477Q96M19 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.33□□□□□ -2.2
LINC00477Q96M19 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC00477Q96M19 SNORA59B-202ENST00000578183 701 ntBASIC1.33□□□□□ -2.2
LINC00477Q96M19 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.33□□□□□ -2.2
LINC00477Q96M19 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC00477Q96M19 AC016727.2-201ENST00000603988 621 ntBASIC1.33□□□□□ -2.2
LINC00477Q96M19 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC00477Q96M19 PCGEM1.1-201ENST00000613431 131 ntBASIC1.33□□□□□ -2.2
LINC00477Q96M19 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.33□□□□□ -2.2
LINC00477Q96M19 AC022513.1-201ENST00000624512 117 ntBASIC1.33□□□□□ -2.2
LINC00477Q96M19 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.33□□□□□ -2.2
LINC00477Q96M19 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LINC00477Q96M19 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
LINC00477Q96M19 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
LINC00477Q96M19 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
LINC00477Q96M19 Y_RNA.339-201ENST00000365325 102 ntBASIC1.32□□□□□ -2.2
LINC00477Q96M19 RNU6-997P-201ENST00000384725 107 ntBASIC1.32□□□□□ -2.2
LINC00477Q96M19 MT-TL1-201ENST00000386347 75 ntBASIC1.32□□□□□ -2.2
LINC00477Q96M19 MIR548F5-201ENST00000408421 86 ntBASIC1.32□□□□□ -2.2
LINC00477Q96M19 MIR1283-2-201ENST00000408621 87 ntBASIC1.32□□□□□ -2.2
LINC00477Q96M19 RNU6-1245P-201ENST00000411130 106 ntBASIC1.32□□□□□ -2.2
LINC00477Q96M19 UBE2V1P4-201ENST00000425374 344 ntBASIC1.32□□□□□ -2.2
LINC00477Q96M19 MTND1P17-201ENST00000448961 204 ntBASIC1.32□□□□□ -2.2
LINC00477Q96M19 AL137159.1-201ENST00000452808 512 ntBASIC1.32□□□□□ -2.2
LINC00477Q96M19 MTND5P5-201ENST00000503764 376 ntBASIC1.32□□□□□ -2.2
LINC00477Q96M19 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.32□□□□□ -2.2
LINC00477Q96M19 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.32□□□□□ -2.2
LINC00477Q96M19 RNU6-566P-201ENST00000516790 107 ntBASIC1.32□□□□□ -2.2
LINC00477Q96M19 RNU6-1213P-201ENST00000517075 94 ntBASIC1.32□□□□□ -2.2
LINC00477Q96M19 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.32□□□□□ -2.2
LINC00477Q96M19 AC109446.1-201ENST00000566172 220 ntBASIC1.32□□□□□ -2.2
LINC00477Q96M19 MIR4648-201ENST00000580107 72 ntBASIC1.32□□□□□ -2.2
LINC00477Q96M19 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.32□□□□□ -2.2
LINC00477Q96M19 AC025754.2-201ENST00000606491 432 ntBASIC1.32□□□□□ -2.2
LINC00477Q96M19 AC103810.8-201ENST00000607347 118 ntBASIC1.32□□□□□ -2.2
LINC00477Q96M19 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.32□□□□□ -2.2
LINC00477Q96M19 AC009033.1-201ENST00000624279 431 ntBASIC1.32□□□□□ -2.2
LINC00477Q96M19 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.32□□□□□ -2.2
LINC00477Q96M19 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.32□□□□□ -2.2
LINC00477Q96M19 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
LINC00477Q96M19 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.32□□□□□ -2.2
LINC00477Q96M19 Y_RNA.157-201ENST00000363638 102 ntBASIC1.31□□□□□ -2.2
LINC00477Q96M19 Y_RNA.160-201ENST00000363677 92 ntBASIC1.31□□□□□ -2.2
LINC00477Q96M19 Y_RNA.279-201ENST00000364763 95 ntBASIC1.31□□□□□ -2.2
LINC00477Q96M19 RNU6-546P-201ENST00000383991 107 ntBASIC1.31□□□□□ -2.2
LINC00477Q96M19 RNU6-214P-201ENST00000384130 107 ntBASIC1.31□□□□□ -2.2
LINC00477Q96M19 Y_RNA.533-201ENST00000384596 114 ntBASIC1.31□□□□□ -2.2
LINC00477Q96M19 MIR597-201ENST00000384968 97 ntBASIC1.31□□□□□ -2.2
LINC00477Q96M19 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms