Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 Y_RNA.49-201ENST00000362714 112 ntBASIC4.56□□□□□ -1.68
TRIM47Q96LD4 Y_RNA.323-201ENST00000365157 109 ntBASIC4.56□□□□□ -1.68
TRIM47Q96LD4 MIR570-201ENST00000384917 97 ntBASIC4.56□□□□□ -1.68
TRIM47Q96LD4 RNU6-788P-201ENST00000390967 104 ntBASIC4.56□□□□□ -1.68
TRIM47Q96LD4 AL590004.2-201ENST00000404787 371 ntBASIC4.56□□□□□ -1.68
TRIM47Q96LD4 SNORA3C-201ENST00000408792 125 ntBASIC4.56□□□□□ -1.68
TRIM47Q96LD4 Y_RNA.593-201ENST00000410292 98 ntBASIC4.56□□□□□ -1.68
TRIM47Q96LD4 AC008134.1-201ENST00000420943 193 ntBASIC4.56□□□□□ -1.68
TRIM47Q96LD4 PGBD4P5-201ENST00000445958 426 ntBASIC4.56□□□□□ -1.68
TRIM47Q96LD4 AC104619.4-201ENST00000510773 249 ntBASIC4.56□□□□□ -1.68
TRIM47Q96LD4 RNU6-158P-201ENST00000517104 100 ntBASIC4.56□□□□□ -1.68
TRIM47Q96LD4 RNA5SP490-201ENST00000517141 136 ntBASIC4.56□□□□□ -1.68
TRIM47Q96LD4 AC021231.3-201ENST00000558497 370 ntBASIC4.56□□□□□ -1.68
TRIM47Q96LD4 POLR3GP1-201ENST00000594073 261 ntBASIC4.56□□□□□ -1.68
TRIM47Q96LD4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM47Q96LD4 U6.99-201ENST00000637524 83 ntBASIC4.56□□□□□ -1.68
TRIM47Q96LD4 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM47Q96LD4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM47Q96LD4 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM47Q96LD4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM47Q96LD4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM47Q96LD4 AC080128.1-201ENST00000474389 1917 ntBASIC4.55□□□□□ -1.68
TRIM47Q96LD4 RNU1-62P-201ENST00000362599 164 ntBASIC4.55□□□□□ -1.68
TRIM47Q96LD4 SNORD56.1-201ENST00000362913 68 ntBASIC4.55□□□□□ -1.68
TRIM47Q96LD4 Y_RNA.415-201ENST00000384012 112 ntBASIC4.55□□□□□ -1.68
TRIM47Q96LD4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TRIM47Q96LD4 MIR708-201ENST00000390708 88 ntBASIC4.55□□□□□ -1.68
TRIM47Q96LD4 SNORA48.5-201ENST00000391143 135 ntBASIC4.55□□□□□ -1.68
TRIM47Q96LD4 AL035423.1-201ENST00000420331 213 ntBASIC4.55□□□□□ -1.68
TRIM47Q96LD4 AC106707.2-201ENST00000484182 374 ntBASIC4.55□□□□□ -1.68
TRIM47Q96LD4 FAM71BP1-201ENST00000604431 523 ntBASIC4.55□□□□□ -1.68
TRIM47Q96LD4 AC005000.2-201ENST00000605468 310 ntBASIC4.55□□□□□ -1.68
TRIM47Q96LD4 AL035470.1-201ENST00000622571 220 ntBASIC4.55□□□□□ -1.68
TRIM47Q96LD4 MIR2052-201ENST00000636055 55 ntBASIC4.55□□□□□ -1.68
TRIM47Q96LD4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM47Q96LD4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM47Q96LD4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TRIM47Q96LD4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
TRIM47Q96LD4 AL136964.1-201ENST00000622038 2990 ntBASIC4.55□□□□□ -1.68
TRIM47Q96LD4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM47Q96LD4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM47Q96LD4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
TRIM47Q96LD4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM47Q96LD4 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM47Q96LD4 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM47Q96LD4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM47Q96LD4 AL133383.2-201ENST00000622958 2336 ntBASIC4.54□□□□□ -1.68
TRIM47Q96LD4 AC068254.2-201ENST00000623938 3577 ntBASIC4.54□□□□□ -1.68
TRIM47Q96LD4 SNORA63.5-201ENST00000363548 123 ntBASIC4.54□□□□□ -1.68
TRIM47Q96LD4 RNU6-1141P-201ENST00000364520 107 ntBASIC4.54□□□□□ -1.68
TRIM47Q96LD4 RNU6-1080P-201ENST00000383982 107 ntBASIC4.54□□□□□ -1.68
TRIM47Q96LD4 U1.1-201ENST00000384101 164 ntBASIC4.54□□□□□ -1.68
TRIM47Q96LD4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM47Q96LD4 RN7SKP61-201ENST00000410642 295 ntBASIC4.54□□□□□ -1.68
TRIM47Q96LD4 AL139247.1-201ENST00000422768 325 ntBASIC4.54□□□□□ -1.68
TRIM47Q96LD4 AC008065.1-201ENST00000428525 348 ntBASIC4.54□□□□□ -1.68
TRIM47Q96LD4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM47Q96LD4 NDUFS5P3-201ENST00000450668 321 ntBASIC4.54□□□□□ -1.68
TRIM47Q96LD4 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM47Q96LD4 snoU13.3-201ENST00000459441 104 ntBASIC4.54□□□□□ -1.68
TRIM47Q96LD4 AC007215.1-201ENST00000464893 276 ntBASIC4.54□□□□□ -1.68
TRIM47Q96LD4 RNU7-143P-201ENST00000516781 65 ntBASIC4.54□□□□□ -1.68
TRIM47Q96LD4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM47Q96LD4 AL359198.2-201ENST00000611836 194 ntBASIC4.54□□□□□ -1.68
TRIM47Q96LD4 Y_RNA.818-201ENST00000618813 71 ntBASIC4.54□□□□□ -1.68
TRIM47Q96LD4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TRIM47Q96LD4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TRIM47Q96LD4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM47Q96LD4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM47Q96LD4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM47Q96LD4 SNORD35B-201ENST00000363660 87 ntBASIC4.53□□□□□ -1.68
TRIM47Q96LD4 MIR544A-201ENST00000384855 91 ntBASIC4.53□□□□□ -1.68
TRIM47Q96LD4 MIR1278-201ENST00000408753 81 ntBASIC4.53□□□□□ -1.68
TRIM47Q96LD4 AC126124.2-201ENST00000413542 321 ntBASIC4.53□□□□□ -1.68
TRIM47Q96LD4 AC012306.1-201ENST00000423267 114 ntBASIC4.53□□□□□ -1.68
TRIM47Q96LD4 AC007919.1-201ENST00000429380 217 ntBASIC4.53□□□□□ -1.68
TRIM47Q96LD4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
TRIM47Q96LD4 HMGB1P37-201ENST00000439613 609 ntBASIC4.53□□□□□ -1.68
TRIM47Q96LD4 AC007969.2-201ENST00000441891 191 ntBASIC4.53□□□□□ -1.68
TRIM47Q96LD4 CYCSP35-201ENST00000451978 304 ntBASIC4.53□□□□□ -1.68
TRIM47Q96LD4 AL133162.1-201ENST00000463228 453 ntBASIC4.53□□□□□ -1.68
TRIM47Q96LD4 AC090515.1-201ENST00000465295 476 ntBASIC4.53□□□□□ -1.68
TRIM47Q96LD4 RPL31P41-201ENST00000477967 372 ntBASIC4.53□□□□□ -1.68
TRIM47Q96LD4 GNRHR2P1-201ENST00000555315 631 ntBASIC4.53□□□□□ -1.68
TRIM47Q96LD4 AC025946.2-201ENST00000603398 234 ntBASIC4.53□□□□□ -1.68
TRIM47Q96LD4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM47Q96LD4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM47Q96LD4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM47Q96LD4 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TRIM47Q96LD4 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM47Q96LD4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
TRIM47Q96LD4 RNU6-1125P-201ENST00000363601 107 ntBASIC4.52□□□□□ -1.69
TRIM47Q96LD4 RNA5SP399-201ENST00000364003 117 ntBASIC4.52□□□□□ -1.69
TRIM47Q96LD4 Y_RNA.243-201ENST00000364481 109 ntBASIC4.52□□□□□ -1.69
TRIM47Q96LD4 SNORA18.3-201ENST00000384122 132 ntBASIC4.52□□□□□ -1.69
TRIM47Q96LD4 Y_RNA.587-201ENST00000391210 103 ntBASIC4.52□□□□□ -1.69
TRIM47Q96LD4 RNU2-68P-201ENST00000410878 191 ntBASIC4.52□□□□□ -1.69
TRIM47Q96LD4 RNA5SP39-201ENST00000411245 120 ntBASIC4.52□□□□□ -1.69
TRIM47Q96LD4 AL591419.1-201ENST00000427423 339 ntBASIC4.52□□□□□ -1.69
TRIM47Q96LD4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms