Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 AC009163.5-201ENST00000575421 637 ntBASIC3.21□□□□□ -1.9
PHACTR3Q96KR7 SNORD53-201ENST00000579969 78 ntBASIC3.21□□□□□ -1.9
PHACTR3Q96KR7 MIR3668-201ENST00000582138 75 ntBASIC3.21□□□□□ -1.9
PHACTR3Q96KR7 MIR3124-201ENST00000582636 67 ntBASIC3.21□□□□□ -1.9
PHACTR3Q96KR7 HMGN2P15-201ENST00000585707 270 ntBASIC3.21□□□□□ -1.9
PHACTR3Q96KR7 AC023043.3-201ENST00000593113 385 ntBASIC3.21□□□□□ -1.9
PHACTR3Q96KR7 RPS29P30-201ENST00000600975 111 ntBASIC3.21□□□□□ -1.9
PHACTR3Q96KR7 RMST_6.1-201ENST00000611980 203 ntBASIC3.21□□□□□ -1.9
PHACTR3Q96KR7 AL590808.1-201ENST00000618696 141 ntBASIC3.21□□□□□ -1.9
PHACTR3Q96KR7 AC024581.2-201ENST00000619986 252 ntBASIC3.21□□□□□ -1.9
PHACTR3Q96KR7 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 AC004944.1-201ENST00000517807 3059 ntBASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 Y_RNA.19-201ENST00000362462 99 ntBASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 SNORD56.1-201ENST00000362913 68 ntBASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 RNU6-968P-201ENST00000384076 107 ntBASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 SNORA29-201ENST00000384183 140 ntBASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 RNU6-198P-201ENST00000384258 104 ntBASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 U8.10-201ENST00000384260 133 ntBASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 Y_RNA.471-201ENST00000384312 102 ntBASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 MIR628-201ENST00000385229 95 ntBASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 SNORA26.3-201ENST00000391119 136 ntBASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 SNORA3.2-201ENST00000408221 125 ntBASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 RN7SKP61-201ENST00000410642 295 ntBASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 HMGN2P20-201ENST00000437531 273 ntBASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 AC009296.1-201ENST00000443146 155 ntBASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 RPS26P21-201ENST00000475397 348 ntBASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 RNU6-581P-201ENST00000516214 105 ntBASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 Y_RNA.706-201ENST00000516933 99 ntBASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 AC007375.1-201ENST00000554513 578 ntBASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 AC130454.1-201ENST00000622948 401 ntBASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 U6.92-201ENST00000636464 89 ntBASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 MAPK10-322ENST00000641485 4530 ntBASIC3.2□□□□□ -1.9
PHACTR3Q96KR7 RNU6-1285P-201ENST00000363480 105 ntBASIC3.19□□□□□ -1.9
PHACTR3Q96KR7 RNU6-1141P-201ENST00000364520 107 ntBASIC3.19□□□□□ -1.9
PHACTR3Q96KR7 U3.13-201ENST00000364804 214 ntBASIC3.19□□□□□ -1.9
PHACTR3Q96KR7 Y_RNA.288-201ENST00000364854 92 ntBASIC3.19□□□□□ -1.9
PHACTR3Q96KR7 RNU6-1280P-201ENST00000365211 107 ntBASIC3.19□□□□□ -1.9
PHACTR3Q96KR7 Y_RNA.447-201ENST00000384184 113 ntBASIC3.19□□□□□ -1.9
PHACTR3Q96KR7 Y_RNA.461-201ENST00000384263 103 ntBASIC3.19□□□□□ -1.9
PHACTR3Q96KR7 MIR887-201ENST00000401258 79 ntBASIC3.19□□□□□ -1.9
PHACTR3Q96KR7 RNU6-847P-201ENST00000411115 108 ntBASIC3.19□□□□□ -1.9
PHACTR3Q96KR7 SDAD1P3-201ENST00000427380 333 ntBASIC3.19□□□□□ -1.9
PHACTR3Q96KR7 AC104564.1-201ENST00000493028 407 ntBASIC3.19□□□□□ -1.9
PHACTR3Q96KR7 AC026436.1-201ENST00000510537 270 ntBASIC3.19□□□□□ -1.9
PHACTR3Q96KR7 RNU6-397P-201ENST00000516226 104 ntBASIC3.19□□□□□ -1.9
PHACTR3Q96KR7 RNU6-1012P-201ENST00000516606 109 ntBASIC3.19□□□□□ -1.9
PHACTR3Q96KR7 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.19□□□□□ -1.9
PHACTR3Q96KR7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.19□□□□□ -1.9
PHACTR3Q96KR7 MIR5092-201ENST00000583139 88 ntBASIC3.19□□□□□ -1.9
PHACTR3Q96KR7 AC019159.1-201ENST00000605094 187 ntBASIC3.19□□□□□ -1.9
PHACTR3Q96KR7 AC103810.6-201ENST00000606708 136 ntBASIC3.19□□□□□ -1.9
PHACTR3Q96KR7 AC016717.2-201ENST00000609089 5141 ntBASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 OR56A5-201ENST00000340110 738 ntBASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 RNU6-1301P-201ENST00000362724 104 ntBASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 RNU6-713P-201ENST00000384761 107 ntBASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 SNORD115-46-201ENST00000390982 71 ntBASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 RNU1-139P-201ENST00000391307 165 ntBASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 RNA5SP390-201ENST00000410191 113 ntBASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 EIF1P2-201ENST00000428233 350 ntBASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 RNU6-1132P-201ENST00000459214 107 ntBASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 RNU7-23P-201ENST00000459465 62 ntBASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 TOMM22P6-201ENST00000465035 409 ntBASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 AC234781.5-201ENST00000508429 271 ntBASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 AP003733.2-201ENST00000529409 171 ntBASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 AC136932.1-201ENST00000574771 208 ntBASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 AC078899.3-201ENST00000599065 212 ntBASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 AL355877.2-201ENST00000603670 358 ntBASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PHACTR3Q96KR7 AC010615.1-201ENST00000594254 1764 ntBASIC3.17□□□□□ -1.9
PHACTR3Q96KR7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.17□□□□□ -1.9
PHACTR3Q96KR7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.17□□□□□ -1.9
PHACTR3Q96KR7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PHACTR3Q96KR7 RNU6-318P-201ENST00000384283 103 ntBASIC3.17□□□□□ -1.9
PHACTR3Q96KR7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PHACTR3Q96KR7 RNA5SP508-201ENST00000411327 119 ntBASIC3.17□□□□□ -1.9
PHACTR3Q96KR7 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.17□□□□□ -1.9
PHACTR3Q96KR7 RPL21P38-201ENST00000418090 167 ntBASIC3.17□□□□□ -1.9
PHACTR3Q96KR7 USP9YP16-201ENST00000430287 407 ntBASIC3.17□□□□□ -1.9
PHACTR3Q96KR7 USP9YP23-201ENST00000455085 407 ntBASIC3.17□□□□□ -1.9
PHACTR3Q96KR7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.17□□□□□ -1.9
PHACTR3Q96KR7 ACA59.2-201ENST00000517061 156 ntBASIC3.17□□□□□ -1.9
PHACTR3Q96KR7 AC027288.2-201ENST00000553028 243 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms