Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 EIF4EP4-201ENST00000424916 578 ntBASIC2.77□□□□□ -1.97
VPS50Q96JG6 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.77□□□□□ -1.97
VPS50Q96JG6 AL445687.1-201ENST00000439946 251 ntBASIC2.77□□□□□ -1.97
VPS50Q96JG6 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS50Q96JG6 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS50Q96JG6 MTND5P22-201ENST00000458380 195 ntBASIC2.77□□□□□ -1.97
VPS50Q96JG6 AC117440.1-201ENST00000474107 571 ntBASIC2.77□□□□□ -1.97
VPS50Q96JG6 SNORA40.14-201ENST00000516543 86 ntBASIC2.77□□□□□ -1.97
VPS50Q96JG6 AC040926.1-201ENST00000530195 238 ntBASIC2.77□□□□□ -1.97
VPS50Q96JG6 AL356575.1-201ENST00000603008 283 ntBASIC2.77□□□□□ -1.97
VPS50Q96JG6 AC124312.5-201ENST00000604451 268 ntBASIC2.77□□□□□ -1.97
VPS50Q96JG6 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS50Q96JG6 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS50Q96JG6 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS50Q96JG6 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS50Q96JG6 RNU1-35P-201ENST00000362782 153 ntBASIC2.76□□□□□ -1.97
VPS50Q96JG6 RNU6-655P-201ENST00000362858 107 ntBASIC2.76□□□□□ -1.97
VPS50Q96JG6 Y_RNA.319-201ENST00000365138 92 ntBASIC2.76□□□□□ -1.97
VPS50Q96JG6 SNORD14.1-201ENST00000365609 90 ntBASIC2.76□□□□□ -1.97
VPS50Q96JG6 RNU6-1083P-201ENST00000384022 107 ntBASIC2.76□□□□□ -1.97
VPS50Q96JG6 RNU6-378P-201ENST00000384324 107 ntBASIC2.76□□□□□ -1.97
VPS50Q96JG6 Y_RNA.500-201ENST00000384466 111 ntBASIC2.76□□□□□ -1.97
VPS50Q96JG6 CBX3P9-201ENST00000402326 552 ntBASIC2.76□□□□□ -1.97
VPS50Q96JG6 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.76□□□□□ -1.97
VPS50Q96JG6 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.76□□□□□ -1.97
VPS50Q96JG6 AL590556.1-201ENST00000423231 483 ntBASIC2.76□□□□□ -1.97
VPS50Q96JG6 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.76□□□□□ -1.97
VPS50Q96JG6 SNORA59A-201ENST00000459326 152 ntBASIC2.76□□□□□ -1.97
VPS50Q96JG6 AC107032.1-201ENST00000485945 480 ntBASIC2.76□□□□□ -1.97
VPS50Q96JG6 AC132942.1-201ENST00000486753 483 ntBASIC2.76□□□□□ -1.97
VPS50Q96JG6 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.76□□□□□ -1.97
VPS50Q96JG6 SCARNA11.3-201ENST00000517276 130 ntBASIC2.76□□□□□ -1.97
VPS50Q96JG6 MIR3136-201ENST00000583498 78 ntBASIC2.76□□□□□ -1.97
VPS50Q96JG6 MIR3117-201ENST00000584034 78 ntBASIC2.76□□□□□ -1.97
VPS50Q96JG6 AC010297.1-201ENST00000623948 149 ntBASIC2.76□□□□□ -1.97
VPS50Q96JG6 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.76□□□□□ -1.97
VPS50Q96JG6 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
VPS50Q96JG6 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VPS50Q96JG6 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
VPS50Q96JG6 RNU1-72P-201ENST00000362976 153 ntBASIC2.75□□□□□ -1.97
VPS50Q96JG6 RNU6-1210P-201ENST00000363775 107 ntBASIC2.75□□□□□ -1.97
VPS50Q96JG6 RNU6-1105P-201ENST00000384774 107 ntBASIC2.75□□□□□ -1.97
VPS50Q96JG6 MIR218-1-201ENST00000384999 110 ntBASIC2.75□□□□□ -1.97
VPS50Q96JG6 MIR628-201ENST00000385229 95 ntBASIC2.75□□□□□ -1.97
VPS50Q96JG6 RNA5SP213-201ENST00000391031 106 ntBASIC2.75□□□□□ -1.97
VPS50Q96JG6 RNU6-101P-201ENST00000410323 104 ntBASIC2.75□□□□□ -1.97
VPS50Q96JG6 AL358176.2-201ENST00000425769 204 ntBASIC2.75□□□□□ -1.97
VPS50Q96JG6 WARS2P1-201ENST00000429678 537 ntBASIC2.75□□□□□ -1.97
VPS50Q96JG6 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS50Q96JG6 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS50Q96JG6 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.75□□□□□ -1.97
VPS50Q96JG6 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS50Q96JG6 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS50Q96JG6 AC140059.1-201ENST00000489238 361 ntBASIC2.75□□□□□ -1.97
VPS50Q96JG6 RNU6-58P-201ENST00000517143 103 ntBASIC2.75□□□□□ -1.97
VPS50Q96JG6 AC022868.1-201ENST00000517767 391 ntBASIC2.75□□□□□ -1.97
VPS50Q96JG6 AC109329.2-201ENST00000519658 482 ntBASIC2.75□□□□□ -1.97
VPS50Q96JG6 AC090617.3-201ENST00000573670 475 ntBASIC2.75□□□□□ -1.97
VPS50Q96JG6 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.75□□□□□ -1.97
VPS50Q96JG6 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
VPS50Q96JG6 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VPS50Q96JG6 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.74□□□□□ -1.97
VPS50Q96JG6 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.74□□□□□ -1.97
VPS50Q96JG6 OR56A5-201ENST00000340110 738 ntBASIC2.74□□□□□ -1.97
VPS50Q96JG6 RNU6-1309P-201ENST00000363305 108 ntBASIC2.74□□□□□ -1.97
VPS50Q96JG6 Y_RNA.133-201ENST00000363428 110 ntBASIC2.74□□□□□ -1.97
VPS50Q96JG6 SNORA51.11-201ENST00000384442 131 ntBASIC2.74□□□□□ -1.97
VPS50Q96JG6 Y_RNA.510-201ENST00000384511 114 ntBASIC2.74□□□□□ -1.97
VPS50Q96JG6 RNU6-1093P-201ENST00000391194 107 ntBASIC2.74□□□□□ -1.97
VPS50Q96JG6 MIR208B-201ENST00000401172 77 ntBASIC2.74□□□□□ -1.97
VPS50Q96JG6 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.74□□□□□ -1.97
VPS50Q96JG6 RPL30P4-201ENST00000429309 333 ntBASIC2.74□□□□□ -1.97
VPS50Q96JG6 USP9YP16-201ENST00000430287 407 ntBASIC2.74□□□□□ -1.97
VPS50Q96JG6 AC025750.2-201ENST00000442609 450 ntBASIC2.74□□□□□ -1.97
VPS50Q96JG6 USP9YP23-201ENST00000455085 407 ntBASIC2.74□□□□□ -1.97
VPS50Q96JG6 AC073901.1-201ENST00000462471 408 ntBASIC2.74□□□□□ -1.97
VPS50Q96JG6 AC010469.2-201ENST00000496412 480 ntBASIC2.74□□□□□ -1.97
VPS50Q96JG6 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.74□□□□□ -1.97
VPS50Q96JG6 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VPS50Q96JG6 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.74□□□□□ -1.97
VPS50Q96JG6 CYP4A27P-201ENST00000567218 190 ntBASIC2.74□□□□□ -1.97
VPS50Q96JG6 MIR3923-201ENST00000579521 83 ntBASIC2.74□□□□□ -1.97
VPS50Q96JG6 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.74□□□□□ -1.97
VPS50Q96JG6 RPL30P11-203ENST00000598995 310 ntBASIC2.74□□□□□ -1.97
VPS50Q96JG6 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS50Q96JG6 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VPS50Q96JG6 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VPS50Q96JG6 RNU1-138P-201ENST00000384093 164 ntBASIC2.73□□□□□ -1.97
VPS50Q96JG6 RNU6-541P-201ENST00000384709 110 ntBASIC2.73□□□□□ -1.97
VPS50Q96JG6 MIR10B-201ENST00000385011 110 ntBASIC2.73□□□□□ -1.97
VPS50Q96JG6 SNORA12-201ENST00000391162 147 ntBASIC2.73□□□□□ -1.97
VPS50Q96JG6 MIR548F4-201ENST00000408515 105 ntBASIC2.73□□□□□ -1.97
VPS50Q96JG6 RNA5SP201-201ENST00000410316 124 ntBASIC2.73□□□□□ -1.97
VPS50Q96JG6 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.73□□□□□ -1.97
VPS50Q96JG6 DPH3P2-201ENST00000422618 250 ntBASIC2.73□□□□□ -1.97
VPS50Q96JG6 EIF1P2-201ENST00000428233 350 ntBASIC2.73□□□□□ -1.97
VPS50Q96JG6 AC087499.2-201ENST00000432861 149 ntBASIC2.73□□□□□ -1.97
VPS50Q96JG6 MTCO3P8-201ENST00000453691 755 ntBASIC2.73□□□□□ -1.97
VPS50Q96JG6 AC145146.1-201ENST00000496370 254 ntBASIC2.73□□□□□ -1.97
VPS50Q96JG6 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 508.5 ms