Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 MIR4753-201ENST00000585119 83 ntBASIC1.77□□□□□ -2.13
VMP1Q96GC9 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.77□□□□□ -2.13
VMP1Q96GC9 AC104458.1-201ENST00000608243 463 ntBASIC1.77□□□□□ -2.13
VMP1Q96GC9 AC005562.2-201ENST00000618264 111 ntBASIC1.77□□□□□ -2.13
VMP1Q96GC9 FER-210ENST00000628534 558 ntTSL 5 BASIC1.77□□□□□ -2.13
VMP1Q96GC9 RNU5B-2P-201ENST00000363036 113 ntBASIC1.76□□□□□ -2.13
VMP1Q96GC9 RNU6-1019P-201ENST00000364424 107 ntBASIC1.76□□□□□ -2.13
VMP1Q96GC9 RNU6-1286P-201ENST00000383871 107 ntBASIC1.76□□□□□ -2.13
VMP1Q96GC9 RNU6-418P-201ENST00000384035 107 ntBASIC1.76□□□□□ -2.13
VMP1Q96GC9 U8.13-201ENST00000390842 128 ntBASIC1.76□□□□□ -2.13
VMP1Q96GC9 MIR1283-1-201ENST00000408494 87 ntBASIC1.76□□□□□ -2.13
VMP1Q96GC9 TIMM9P3-201ENST00000428659 274 ntBASIC1.76□□□□□ -2.13
VMP1Q96GC9 C8orf59P1-201ENST00000429930 303 ntBASIC1.76□□□□□ -2.13
VMP1Q96GC9 SRRM1P2-201ENST00000464531 1192 ntBASIC1.76□□□□□ -2.13
VMP1Q96GC9 AC091435.1-201ENST00000505442 584 ntBASIC1.76□□□□□ -2.13
VMP1Q96GC9 RNU6-1041P-201ENST00000516254 102 ntBASIC1.76□□□□□ -2.13
VMP1Q96GC9 RNU6-856P-201ENST00000516959 98 ntBASIC1.76□□□□□ -2.13
VMP1Q96GC9 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.76□□□□□ -2.13
VMP1Q96GC9 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.76□□□□□ -2.13
VMP1Q96GC9 AC110588.1-201ENST00000559699 137 ntBASIC1.76□□□□□ -2.13
VMP1Q96GC9 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.76□□□□□ -2.13
VMP1Q96GC9 SNRPGP19-201ENST00000603826 189 ntBASIC1.76□□□□□ -2.13
VMP1Q96GC9 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.76□□□□□ -2.13
VMP1Q96GC9 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.76□□□□□ -2.13
VMP1Q96GC9 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.75□□□□□ -2.13
VMP1Q96GC9 Y_RNA.123-201ENST00000363338 102 ntBASIC1.75□□□□□ -2.13
VMP1Q96GC9 RNU1-96P-201ENST00000364163 162 ntBASIC1.75□□□□□ -2.13
VMP1Q96GC9 SNORD116-2-201ENST00000384274 95 ntBASIC1.75□□□□□ -2.13
VMP1Q96GC9 SNORD116-6-201ENST00000384711 96 ntBASIC1.75□□□□□ -2.13
VMP1Q96GC9 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
VMP1Q96GC9 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
VMP1Q96GC9 MRPS10P2-201ENST00000431226 381 ntBASIC1.75□□□□□ -2.13
VMP1Q96GC9 HSPE1P24-201ENST00000450782 238 ntBASIC1.75□□□□□ -2.13
VMP1Q96GC9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.75□□□□□ -2.13
VMP1Q96GC9 PPP1R2P5-201ENST00000457256 603 ntBASIC1.75□□□□□ -2.13
VMP1Q96GC9 RNU6-1208P-201ENST00000459588 107 ntBASIC1.75□□□□□ -2.13
VMP1Q96GC9 RPL26P26-201ENST00000480251 434 ntBASIC1.75□□□□□ -2.13
VMP1Q96GC9 RNU2-34P-201ENST00000516534 121 ntBASIC1.75□□□□□ -2.13
VMP1Q96GC9 RNU6-295P-201ENST00000516901 104 ntBASIC1.75□□□□□ -2.13
VMP1Q96GC9 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.75□□□□□ -2.13
VMP1Q96GC9 DEFB131C-201ENST00000528817 165 ntBASIC1.75□□□□□ -2.13
VMP1Q96GC9 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.75□□□□□ -2.13
VMP1Q96GC9 SNORA77B-201ENST00000578179 125 ntBASIC1.75□□□□□ -2.13
VMP1Q96GC9 SNORA59B-202ENST00000578183 701 ntBASIC1.75□□□□□ -2.13
VMP1Q96GC9 FGF7P1-201ENST00000582820 288 ntBASIC1.75□□□□□ -2.13
VMP1Q96GC9 MIR5006-201ENST00000583027 110 ntBASIC1.75□□□□□ -2.13
VMP1Q96GC9 AC016727.2-201ENST00000603988 621 ntBASIC1.75□□□□□ -2.13
VMP1Q96GC9 AC092807.2-201ENST00000609367 243 ntBASIC1.75□□□□□ -2.13
VMP1Q96GC9 TCL6_2.1-201ENST00000615162 119 ntBASIC1.75□□□□□ -2.13
VMP1Q96GC9 MIR6863-201ENST00000636112 90 ntBASIC1.75□□□□□ -2.13
VMP1Q96GC9 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.75□□□□□ -2.13
VMP1Q96GC9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
VMP1Q96GC9 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
VMP1Q96GC9 RNU6-1085P-201ENST00000363576 107 ntBASIC1.74□□□□□ -2.13
VMP1Q96GC9 RNU4-20P-201ENST00000365601 151 ntBASIC1.74□□□□□ -2.13
VMP1Q96GC9 RNU6-968P-201ENST00000384076 107 ntBASIC1.74□□□□□ -2.13
VMP1Q96GC9 EIF4E2P1-201ENST00000393781 255 ntBASIC1.74□□□□□ -2.13
VMP1Q96GC9 RPS26P42-201ENST00000413485 326 ntBASIC1.74□□□□□ -2.13
VMP1Q96GC9 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.74□□□□□ -2.13
VMP1Q96GC9 AC245047.4-201ENST00000433189 144 ntBASIC1.74□□□□□ -2.13
VMP1Q96GC9 JTBP1-201ENST00000441314 247 ntBASIC1.74□□□□□ -2.13
VMP1Q96GC9 AC004386.2-201ENST00000441858 148 ntBASIC1.74□□□□□ -2.13
VMP1Q96GC9 MTND3P16-201ENST00000452205 344 ntBASIC1.74□□□□□ -2.13
VMP1Q96GC9 AMD1P1-201ENST00000457220 922 ntBASIC1.74□□□□□ -2.13
VMP1Q96GC9 snoU13.30-201ENST00000458951 104 ntBASIC1.74□□□□□ -2.13
VMP1Q96GC9 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.74□□□□□ -2.13
VMP1Q96GC9 AC116337.1-201ENST00000509680 687 ntBASIC1.74□□□□□ -2.13
VMP1Q96GC9 AC092436.3-201ENST00000511788 257 ntBASIC1.74□□□□□ -2.13
VMP1Q96GC9 AC107393.1-201ENST00000512403 346 ntBASIC1.74□□□□□ -2.13
VMP1Q96GC9 RNA5SP481-201ENST00000516814 122 ntBASIC1.74□□□□□ -2.13
VMP1Q96GC9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.74□□□□□ -2.13
VMP1Q96GC9 AC084364.2-201ENST00000546924 395 ntBASIC1.74□□□□□ -2.13
VMP1Q96GC9 AC024614.2-201ENST00000577584 372 ntBASIC1.74□□□□□ -2.13
VMP1Q96GC9 MTND1P15-201ENST00000579262 949 ntBASIC1.74□□□□□ -2.13
VMP1Q96GC9 PIGPP4-201ENST00000584447 307 ntBASIC1.74□□□□□ -2.13
VMP1Q96GC9 AP000907.4-201ENST00000604143 237 ntBASIC1.74□□□□□ -2.13
VMP1Q96GC9 CTHRC1P1-201ENST00000605383 469 ntBASIC1.74□□□□□ -2.13
VMP1Q96GC9 AL158209.2-201ENST00000619266 216 ntBASIC1.74□□□□□ -2.13
VMP1Q96GC9 AC073534.2-201ENST00000620377 381 ntBASIC1.74□□□□□ -2.13
VMP1Q96GC9 MIR7843-201ENST00000622274 79 ntBASIC1.74□□□□□ -2.13
VMP1Q96GC9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
VMP1Q96GC9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
VMP1Q96GC9 RNU6-271P-201ENST00000363858 105 ntBASIC1.73□□□□□ -2.13
VMP1Q96GC9 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.73□□□□□ -2.13
VMP1Q96GC9 SNORA40.18-201ENST00000391200 128 ntBASIC1.73□□□□□ -2.13
VMP1Q96GC9 RNU1-98P-201ENST00000458992 160 ntBASIC1.73□□□□□ -2.13
VMP1Q96GC9 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.73□□□□□ -2.13
VMP1Q96GC9 RNU6-948P-201ENST00000516374 107 ntBASIC1.73□□□□□ -2.13
VMP1Q96GC9 RNA5SP384-201ENST00000516615 116 ntBASIC1.73□□□□□ -2.13
VMP1Q96GC9 MRPS36P4-201ENST00000534436 298 ntBASIC1.73□□□□□ -2.13
VMP1Q96GC9 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.73□□□□□ -2.13
VMP1Q96GC9 AC011494.1-201ENST00000596454 237 ntBASIC1.73□□□□□ -2.13
VMP1Q96GC9 AC245008.1-201ENST00000608123 476 ntBASIC1.73□□□□□ -2.13
VMP1Q96GC9 MIR6845-201ENST00000613182 61 ntBASIC1.73□□□□□ -2.13
VMP1Q96GC9 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.73□□□□□ -2.13
VMP1Q96GC9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
VMP1Q96GC9 MTND5P26-201ENST00000426018 1752 ntBASIC1.72□□□□□ -2.13
VMP1Q96GC9 SNORD48-201ENST00000364953 64 ntBASIC1.72□□□□□ -2.13
VMP1Q96GC9 RNU6-259P-201ENST00000383999 107 ntBASIC1.72□□□□□ -2.13
VMP1Q96GC9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms