Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 NDUFB4P6-201ENST00000436819 366 ntBASIC3.23□□□□□ -1.89
CHFRQ96EP1 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.23□□□□□ -1.89
CHFRQ96EP1 AC073901.1-201ENST00000462471 408 ntBASIC3.23□□□□□ -1.89
CHFRQ96EP1 CENPBD1P1-201ENST00000464061 469 ntBASIC3.23□□□□□ -1.89
CHFRQ96EP1 RN7SL442P-201ENST00000473804 320 ntBASIC3.23□□□□□ -1.89
CHFRQ96EP1 RPS27P26-201ENST00000494583 239 ntBASIC3.23□□□□□ -1.89
CHFRQ96EP1 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHFRQ96EP1 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.23□□□□□ -1.89
CHFRQ96EP1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.23□□□□□ -1.89
CHFRQ96EP1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.23□□□□□ -1.89
CHFRQ96EP1 ATP5F1P5-201ENST00000526403 760 ntBASIC3.23□□□□□ -1.89
CHFRQ96EP1 AK6P2-201ENST00000549020 471 ntBASIC3.23□□□□□ -1.89
CHFRQ96EP1 MIR3609-201ENST00000582661 80 ntBASIC3.23□□□□□ -1.89
CHFRQ96EP1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.23□□□□□ -1.89
CHFRQ96EP1 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.23□□□□□ -1.89
CHFRQ96EP1 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.23□□□□□ -1.89
CHFRQ96EP1 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
CHFRQ96EP1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHFRQ96EP1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHFRQ96EP1 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.22□□□□□ -1.89
CHFRQ96EP1 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CHFRQ96EP1 DEFB108F-201ENST00000344638 222 ntBASIC3.22□□□□□ -1.89
CHFRQ96EP1 MIR410-201ENST00000362222 80 ntBASIC3.22□□□□□ -1.89
CHFRQ96EP1 RNU6-653P-201ENST00000363074 106 ntBASIC3.22□□□□□ -1.89
CHFRQ96EP1 Y_RNA.218-201ENST00000364218 104 ntBASIC3.22□□□□□ -1.89
CHFRQ96EP1 RNU6-1025P-201ENST00000410629 104 ntBASIC3.22□□□□□ -1.89
CHFRQ96EP1 TOMM20P4-201ENST00000427861 435 ntBASIC3.22□□□□□ -1.89
CHFRQ96EP1 AL139132.1-201ENST00000431587 344 ntBASIC3.22□□□□□ -1.89
CHFRQ96EP1 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.22□□□□□ -1.89
CHFRQ96EP1 IFNA11P-201ENST00000446352 526 ntBASIC3.22□□□□□ -1.89
CHFRQ96EP1 MRPS10P1-201ENST00000448483 130 ntBASIC3.22□□□□□ -1.89
CHFRQ96EP1 AC007395.1-201ENST00000451333 677 ntBASIC3.22□□□□□ -1.89
CHFRQ96EP1 snoU13.30-201ENST00000458951 104 ntBASIC3.22□□□□□ -1.89
CHFRQ96EP1 RPS27P29-201ENST00000463110 252 ntBASIC3.22□□□□□ -1.89
CHFRQ96EP1 RNU7-110P-201ENST00000516891 62 ntBASIC3.22□□□□□ -1.89
CHFRQ96EP1 AC084851.1-201ENST00000529105 249 ntBASIC3.22□□□□□ -1.89
CHFRQ96EP1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.22□□□□□ -1.89
CHFRQ96EP1 MIR3921-201ENST00000577308 85 ntBASIC3.22□□□□□ -1.89
CHFRQ96EP1 AC008749.1-201ENST00000597650 306 ntBASIC3.22□□□□□ -1.89
CHFRQ96EP1 AC005828.6-201ENST00000606610 232 ntBASIC3.22□□□□□ -1.89
CHFRQ96EP1 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.22□□□□□ -1.89
CHFRQ96EP1 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.22□□□□□ -1.89
CHFRQ96EP1 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHFRQ96EP1 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHFRQ96EP1 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
CHFRQ96EP1 RNA5SP361-201ENST00000362686 118 ntBASIC3.21□□□□□ -1.9
CHFRQ96EP1 Y_RNA.136-201ENST00000363444 102 ntBASIC3.21□□□□□ -1.9
CHFRQ96EP1 SNORA5B-201ENST00000363786 132 ntBASIC3.21□□□□□ -1.9
CHFRQ96EP1 Y_RNA.217-201ENST00000364214 105 ntBASIC3.21□□□□□ -1.9
CHFRQ96EP1 RNU6-514P-201ENST00000384208 107 ntBASIC3.21□□□□□ -1.9
CHFRQ96EP1 RNU6-17P-201ENST00000384245 107 ntBASIC3.21□□□□□ -1.9
CHFRQ96EP1 RNU6-18P-201ENST00000384527 107 ntBASIC3.21□□□□□ -1.9
CHFRQ96EP1 RNU6-21P-201ENST00000384710 107 ntBASIC3.21□□□□□ -1.9
CHFRQ96EP1 MIR301A-201ENST00000385261 86 ntBASIC3.21□□□□□ -1.9
CHFRQ96EP1 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CHFRQ96EP1 RNA5SP293-201ENST00000410527 113 ntBASIC3.21□□□□□ -1.9
CHFRQ96EP1 RNU5A-5P-201ENST00000411054 116 ntBASIC3.21□□□□□ -1.9
CHFRQ96EP1 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.21□□□□□ -1.9
CHFRQ96EP1 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.21□□□□□ -1.9
CHFRQ96EP1 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.21□□□□□ -1.9
CHFRQ96EP1 Y_RNA.641-201ENST00000459414 105 ntBASIC3.21□□□□□ -1.9
CHFRQ96EP1 AC087588.1-201ENST00000462203 316 ntBASIC3.21□□□□□ -1.9
CHFRQ96EP1 AC010409.1-201ENST00000487382 476 ntBASIC3.21□□□□□ -1.9
CHFRQ96EP1 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CHFRQ96EP1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.21□□□□□ -1.9
CHFRQ96EP1 AC233702.2-202ENST00000562547 291 ntBASIC3.21□□□□□ -1.9
CHFRQ96EP1 AC008121.1-201ENST00000603244 268 ntBASIC3.21□□□□□ -1.9
CHFRQ96EP1 AC002064.3-201ENST00000623448 346 ntBASIC3.21□□□□□ -1.9
CHFRQ96EP1 MAPK10-322ENST00000641485 4530 ntBASIC3.21□□□□□ -1.9
CHFRQ96EP1 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
CHFRQ96EP1 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CHFRQ96EP1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CHFRQ96EP1 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
CHFRQ96EP1 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.2□□□□□ -1.9
CHFRQ96EP1 MIR412-201ENST00000362142 91 ntBASIC3.2□□□□□ -1.9
CHFRQ96EP1 RNU6-879P-201ENST00000364328 108 ntBASIC3.2□□□□□ -1.9
CHFRQ96EP1 SNORA71.1-201ENST00000364523 117 ntBASIC3.2□□□□□ -1.9
CHFRQ96EP1 Y_RNA.570-201ENST00000384750 101 ntBASIC3.2□□□□□ -1.9
CHFRQ96EP1 Y_RNA.571-201ENST00000384753 98 ntBASIC3.2□□□□□ -1.9
CHFRQ96EP1 AL357139.1-201ENST00000407792 426 ntBASIC3.2□□□□□ -1.9
CHFRQ96EP1 SNORD12B-201ENST00000410433 91 ntBASIC3.2□□□□□ -1.9
CHFRQ96EP1 AC245291.1-201ENST00000419501 328 ntBASIC3.2□□□□□ -1.9
CHFRQ96EP1 AL590383.1-201ENST00000428602 75 ntBASIC3.2□□□□□ -1.9
CHFRQ96EP1 CST9LP2-201ENST00000437612 320 ntBASIC3.2□□□□□ -1.9
CHFRQ96EP1 RPS15AP7-201ENST00000439294 405 ntBASIC3.2□□□□□ -1.9
CHFRQ96EP1 RPL23AP3-201ENST00000453844 468 ntBASIC3.2□□□□□ -1.9
CHFRQ96EP1 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.2□□□□□ -1.9
CHFRQ96EP1 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.2□□□□□ -1.9
CHFRQ96EP1 RN7SKP272-201ENST00000516988 232 ntBASIC3.2□□□□□ -1.9
CHFRQ96EP1 AL161798.1-201ENST00000604630 131 ntBASIC3.2□□□□□ -1.9
CHFRQ96EP1 HSPE1P7-201ENST00000604681 321 ntBASIC3.2□□□□□ -1.9
CHFRQ96EP1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.2□□□□□ -1.9
CHFRQ96EP1 AC027309.3-201ENST00000623419 351 ntBASIC3.2□□□□□ -1.9
CHFRQ96EP1 MIR622-201ENST00000638396 96 ntBASIC3.2□□□□□ -1.9
CHFRQ96EP1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CHFRQ96EP1 AC009812.4-201ENST00000569134 1805 ntBASIC3.2□□□□□ -1.9
CHFRQ96EP1 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHFRQ96EP1 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CHFRQ96EP1 AC010733.2-201ENST00000589496 5702 ntBASIC3.19□□□□□ -1.9
CHFRQ96EP1 RNA5SP383-201ENST00000362934 120 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 236.9 ms