Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 MRPS10P1-201ENST00000448483 130 ntBASIC3.06□□□□□ -1.92
FOXRED1Q96CU9 RPL23AP3-201ENST00000453844 468 ntBASIC3.06□□□□□ -1.92
FOXRED1Q96CU9 RPS4XP2-201ENST00000458402 793 ntBASIC3.06□□□□□ -1.92
FOXRED1Q96CU9 RPS27P29-201ENST00000463110 252 ntBASIC3.06□□□□□ -1.92
FOXRED1Q96CU9 AL133162.1-201ENST00000463228 453 ntBASIC3.06□□□□□ -1.92
FOXRED1Q96CU9 AC140059.1-201ENST00000489238 361 ntBASIC3.06□□□□□ -1.92
FOXRED1Q96CU9 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.06□□□□□ -1.92
FOXRED1Q96CU9 SEM1P1-201ENST00000506694 209 ntBASIC3.06□□□□□ -1.92
FOXRED1Q96CU9 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.06□□□□□ -1.92
FOXRED1Q96CU9 RNU1-45P-201ENST00000517191 141 ntBASIC3.06□□□□□ -1.92
FOXRED1Q96CU9 SNORA81.3-201ENST00000517283 198 ntBASIC3.06□□□□□ -1.92
FOXRED1Q96CU9 AC107934.2-201ENST00000518653 310 ntBASIC3.06□□□□□ -1.92
FOXRED1Q96CU9 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.06□□□□□ -1.92
FOXRED1Q96CU9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.06□□□□□ -1.92
FOXRED1Q96CU9 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.06□□□□□ -1.92
FOXRED1Q96CU9 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.06□□□□□ -1.92
FOXRED1Q96CU9 AC055872.1-201ENST00000570978 278 ntBASIC3.06□□□□□ -1.92
FOXRED1Q96CU9 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.06□□□□□ -1.92
FOXRED1Q96CU9 AC002064.3-201ENST00000623448 346 ntBASIC3.06□□□□□ -1.92
FOXRED1Q96CU9 AC010329.5-201ENST00000623497 2174 ntBASIC3.06□□□□□ -1.92
FOXRED1Q96CU9 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.06□□□□□ -1.92
FOXRED1Q96CU9 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
FOXRED1Q96CU9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
FOXRED1Q96CU9 FAM35CP-201ENST00000554755 2470 ntBASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 AC017071.1-201ENST00000564407 2204 ntBASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 AC103988.1-201ENST00000566382 2177 ntBASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 UBE2WP1-201ENST00000362030 340 ntBASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 Y_RNA.83-201ENST00000363005 113 ntBASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 Y_RNA.101-201ENST00000363154 102 ntBASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 Y_RNA.275-201ENST00000364726 110 ntBASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 SNORA73.2-201ENST00000364946 201 ntBASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 RNU6-805P-201ENST00000365643 106 ntBASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 SNORA12-201ENST00000391162 147 ntBASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 Y_RNA.590-201ENST00000410140 107 ntBASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 AL139156.1-201ENST00000412785 841 ntBASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 YME1L1P1-201ENST00000429435 297 ntBASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 AL353705.1-201ENST00000433468 480 ntBASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 AL133547.1-201ENST00000448546 220 ntBASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 AC091959.1-201ENST00000495857 238 ntBASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 Y_RNA.679-201ENST00000516416 91 ntBASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 SNORA27.4-201ENST00000516650 95 ntBASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 DEFB131C-201ENST00000528817 165 ntBASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 AC022080.3-201ENST00000544433 482 ntBASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 MIR4643-201ENST00000577473 78 ntBASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 MIR7157-201ENST00000635801 60 ntBASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
FOXRED1Q96CU9 AC093010.3-201ENST00000570269 15214 ntBASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 AP003122.5-201ENST00000527668 3766 ntBASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 AL049781.1-201ENST00000623195 3585 ntBASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 RNA5SP383-201ENST00000362934 120 ntBASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 Y_RNA.199-201ENST00000364014 102 ntBASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 SNORD32B-201ENST00000364460 84 ntBASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 RNU6-740P-201ENST00000364734 105 ntBASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 Y_RNA.418-201ENST00000384029 102 ntBASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 RNU6-209P-201ENST00000384118 107 ntBASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 MIR1294-201ENST00000408503 142 ntBASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 Y_RNA.597-201ENST00000410463 100 ntBASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 RNU2-61P-201ENST00000411069 191 ntBASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 AC004866.1-201ENST00000411748 78 ntBASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 AC009963.1-201ENST00000417265 157 ntBASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 AC024067.1-201ENST00000426199 223 ntBASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 TOMM22P2-201ENST00000430735 237 ntBASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 Z75741.1-201ENST00000446793 314 ntBASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 HMGN1P18-201ENST00000457642 277 ntBASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 CENPBD1P1-201ENST00000464061 469 ntBASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 RPL27AP5-201ENST00000469428 449 ntBASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 RNU5F-4P-201ENST00000516581 114 ntBASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 RNA5SP380-201ENST00000517190 98 ntBASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 AC006130.2-201ENST00000586202 326 ntBASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
FOXRED1Q96CU9 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
FOXRED1Q96CU9 U3.8-201ENST00000363675 217 ntBASIC3.03□□□□□ -1.92
FOXRED1Q96CU9 SNORD87-201ENST00000364849 89 ntBASIC3.03□□□□□ -1.92
FOXRED1Q96CU9 DYNLT3P1-201ENST00000378574 347 ntBASIC3.03□□□□□ -1.92
FOXRED1Q96CU9 RNU4-70P-201ENST00000384579 139 ntBASIC3.03□□□□□ -1.92
FOXRED1Q96CU9 RNA5SP293-201ENST00000410527 113 ntBASIC3.03□□□□□ -1.92
FOXRED1Q96CU9 PIGPP3-201ENST00000425307 415 ntBASIC3.03□□□□□ -1.92
FOXRED1Q96CU9 MICF-203ENST00000432679 129 ntBASIC3.03□□□□□ -1.92
FOXRED1Q96CU9 RBMY2UP-201ENST00000453474 324 ntBASIC3.03□□□□□ -1.92
FOXRED1Q96CU9 COX6CP14-201ENST00000469580 174 ntBASIC3.03□□□□□ -1.92
FOXRED1Q96CU9 SRIP1-201ENST00000489235 288 ntBASIC3.03□□□□□ -1.92
FOXRED1Q96CU9 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.03□□□□□ -1.92
FOXRED1Q96CU9 AC023632.4-201ENST00000517783 191 ntBASIC3.03□□□□□ -1.92
FOXRED1Q96CU9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.03□□□□□ -1.92
FOXRED1Q96CU9 AL109918.3-201ENST00000603072 338 ntBASIC3.03□□□□□ -1.92
FOXRED1Q96CU9 AC006133.1-201ENST00000617106 264 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms