Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 WARS2P1-201ENST00000429678 537 ntBASIC3.34□□□□□ -1.87
ERCC4Q92889 AC007215.1-201ENST00000464893 276 ntBASIC3.34□□□□□ -1.87
ERCC4Q92889 AC117440.1-201ENST00000474107 571 ntBASIC3.34□□□□□ -1.87
ERCC4Q92889 AC090525.1-201ENST00000479116 478 ntBASIC3.34□□□□□ -1.87
ERCC4Q92889 RPL26P26-201ENST00000480251 434 ntBASIC3.34□□□□□ -1.87
ERCC4Q92889 AC006445.1-201ENST00000491925 405 ntBASIC3.34□□□□□ -1.87
ERCC4Q92889 UBL5P4-201ENST00000562584 236 ntBASIC3.34□□□□□ -1.87
ERCC4Q92889 AC025281.1-201ENST00000567026 265 ntBASIC3.34□□□□□ -1.87
ERCC4Q92889 MIR3128-201ENST00000581957 66 ntBASIC3.34□□□□□ -1.87
ERCC4Q92889 MIR3136-201ENST00000583498 78 ntBASIC3.34□□□□□ -1.87
ERCC4Q92889 AC012433.1-201ENST00000588916 398 ntBASIC3.34□□□□□ -1.87
ERCC4Q92889 AL138963.2-201ENST00000605137 226 ntBASIC3.34□□□□□ -1.87
ERCC4Q92889 SDR42E1P4-201ENST00000620894 481 ntBASIC3.34□□□□□ -1.87
ERCC4Q92889 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
ERCC4Q92889 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.34□□□□□ -1.88
ERCC4Q92889 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
ERCC4Q92889 Y_RNA.40-201ENST00000362645 93 ntBASIC3.33□□□□□ -1.88
ERCC4Q92889 RNU6-1159P-201ENST00000362933 107 ntBASIC3.33□□□□□ -1.88
ERCC4Q92889 SNORD81.1-201ENST00000363064 77 ntBASIC3.33□□□□□ -1.88
ERCC4Q92889 Y_RNA.143-201ENST00000363520 106 ntBASIC3.33□□□□□ -1.88
ERCC4Q92889 RNU6-879P-201ENST00000364328 108 ntBASIC3.33□□□□□ -1.88
ERCC4Q92889 RNU6-1145P-201ENST00000384246 107 ntBASIC3.33□□□□□ -1.88
ERCC4Q92889 RNU6-541P-201ENST00000384709 110 ntBASIC3.33□□□□□ -1.88
ERCC4Q92889 MIR483-201ENST00000385070 76 ntBASIC3.33□□□□□ -1.88
ERCC4Q92889 AL590135.1-201ENST00000422215 156 ntBASIC3.33□□□□□ -1.88
ERCC4Q92889 AC019205.3-201ENST00000424573 156 ntBASIC3.33□□□□□ -1.88
ERCC4Q92889 RPL23AP58-201ENST00000440453 469 ntBASIC3.33□□□□□ -1.88
ERCC4Q92889 RPL39P38-201ENST00000467018 153 ntBASIC3.33□□□□□ -1.88
ERCC4Q92889 AIG1P1-201ENST00000503376 148 ntBASIC3.33□□□□□ -1.88
ERCC4Q92889 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.33□□□□□ -1.88
ERCC4Q92889 RNU5F-2P-201ENST00000516066 82 ntBASIC3.33□□□□□ -1.88
ERCC4Q92889 SNORA74D-201ENST00000516404 141 ntBASIC3.33□□□□□ -1.88
ERCC4Q92889 RNU6-567P-201ENST00000516746 107 ntBASIC3.33□□□□□ -1.88
ERCC4Q92889 RNA5SP54-201ENST00000516951 92 ntBASIC3.33□□□□□ -1.88
ERCC4Q92889 RN7SKP57-201ENST00000517248 293 ntBASIC3.33□□□□□ -1.88
ERCC4Q92889 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.33□□□□□ -1.88
ERCC4Q92889 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.33□□□□□ -1.88
ERCC4Q92889 AC023824.2-201ENST00000566185 400 ntBASIC3.33□□□□□ -1.88
ERCC4Q92889 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.33□□□□□ -1.88
ERCC4Q92889 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.33□□□□□ -1.88
ERCC4Q92889 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.33□□□□□ -1.88
ERCC4Q92889 AL137843.1-201ENST00000605078 385 ntBASIC3.33□□□□□ -1.88
ERCC4Q92889 AC011476.5-201ENST00000615594 130 ntBASIC3.33□□□□□ -1.88
ERCC4Q92889 AC005296.1-201ENST00000616145 209 ntBASIC3.33□□□□□ -1.88
ERCC4Q92889 AC110079.1-202ENST00000635213 138 ntBASIC3.33□□□□□ -1.88
ERCC4Q92889 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
ERCC4Q92889 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
ERCC4Q92889 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
ERCC4Q92889 Y_RNA.60-201ENST00000362831 98 ntBASIC3.32□□□□□ -1.88
ERCC4Q92889 RNU6-529P-201ENST00000363383 104 ntBASIC3.32□□□□□ -1.88
ERCC4Q92889 MIR767-201ENST00000390228 109 ntBASIC3.32□□□□□ -1.88
ERCC4Q92889 RNA5SP354-201ENST00000391247 136 ntBASIC3.32□□□□□ -1.88
ERCC4Q92889 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ERCC4Q92889 SNORD12B-201ENST00000410433 91 ntBASIC3.32□□□□□ -1.88
ERCC4Q92889 AC096920.1-201ENST00000423991 241 ntBASIC3.32□□□□□ -1.88
ERCC4Q92889 AIMP1P2-201ENST00000425294 312 ntBASIC3.32□□□□□ -1.88
ERCC4Q92889 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.32□□□□□ -1.88
ERCC4Q92889 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.32□□□□□ -1.88
ERCC4Q92889 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.32□□□□□ -1.88
ERCC4Q92889 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.32□□□□□ -1.88
ERCC4Q92889 RPS29P12-201ENST00000460178 152 ntBASIC3.32□□□□□ -1.88
ERCC4Q92889 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.32□□□□□ -1.88
ERCC4Q92889 RAC1P5-201ENST00000512182 576 ntBASIC3.32□□□□□ -1.88
ERCC4Q92889 AC008885.1-201ENST00000514930 301 ntBASIC3.32□□□□□ -1.88
ERCC4Q92889 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.32□□□□□ -1.88
ERCC4Q92889 MIR5004-201ENST00000579078 107 ntBASIC3.32□□□□□ -1.88
ERCC4Q92889 MIR4423-201ENST00000580922 80 ntBASIC3.32□□□□□ -1.88
ERCC4Q92889 MIR8057-201ENST00000620957 69 ntBASIC3.32□□□□□ -1.88
ERCC4Q92889 SNORD98-201ENST00000636377 67 ntBASIC3.32□□□□□ -1.88
ERCC4Q92889 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ERCC4Q92889 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ERCC4Q92889 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.31□□□□□ -1.88
ERCC4Q92889 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.31□□□□□ -1.88
ERCC4Q92889 MTND5P6-201ENST00000422338 1798 ntBASIC3.31□□□□□ -1.88
ERCC4Q92889 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ERCC4Q92889 RNU1-109P-201ENST00000383960 147 ntBASIC3.31□□□□□ -1.88
ERCC4Q92889 Y_RNA.462-201ENST00000384268 102 ntBASIC3.31□□□□□ -1.88
ERCC4Q92889 Y_RNA.478-201ENST00000384358 107 ntBASIC3.31□□□□□ -1.88
ERCC4Q92889 MT-TR-201ENST00000387439 65 ntBASIC3.31□□□□□ -1.88
ERCC4Q92889 AL133475.1-201ENST00000404414 305 ntBASIC3.31□□□□□ -1.88
ERCC4Q92889 RNU6-1001P-201ENST00000411265 100 ntBASIC3.31□□□□□ -1.88
ERCC4Q92889 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.31□□□□□ -1.88
ERCC4Q92889 MTND4LP30-201ENST00000454092 297 ntBASIC3.31□□□□□ -1.88
ERCC4Q92889 RPS29P2-201ENST00000479278 136 ntBASIC3.31□□□□□ -1.88
ERCC4Q92889 HMGB1P35-201ENST00000503360 598 ntBASIC3.31□□□□□ -1.88
ERCC4Q92889 AC107222.1-201ENST00000510899 637 ntBASIC3.31□□□□□ -1.88
ERCC4Q92889 SNORA31.6-201ENST00000516241 130 ntBASIC3.31□□□□□ -1.88
ERCC4Q92889 CYP4A27P-201ENST00000567218 190 ntBASIC3.31□□□□□ -1.88
ERCC4Q92889 AC105137.2-201ENST00000569073 466 ntBASIC3.31□□□□□ -1.88
ERCC4Q92889 MIR5695-201ENST00000579717 85 ntBASIC3.31□□□□□ -1.88
ERCC4Q92889 MIR3200-201ENST00000580767 85 ntBASIC3.31□□□□□ -1.88
ERCC4Q92889 AC073410.2-201ENST00000603240 332 ntBASIC3.31□□□□□ -1.88
ERCC4Q92889 AC141273.2-201ENST00000618989 130 ntBASIC3.31□□□□□ -1.88
ERCC4Q92889 AC078938.1-201ENST00000620993 318 ntBASIC3.31□□□□□ -1.88
ERCC4Q92889 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
ERCC4Q92889 AC099654.7-201ENST00000635788 2127 ntBASIC3.31□□□□□ -1.88
ERCC4Q92889 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.3□□□□□ -1.88
ERCC4Q92889 Z82195.2-201ENST00000612348 18351 ntBASIC3.3□□□□□ -1.88
ERCC4Q92889 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
ERCC4Q92889 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 447.2 ms