Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC079140.5-201ENST00000507882 310 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 LRRC34P2-201ENST00000514850 553 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 RNU6-377P-201ENST00000515965 102 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 HSBP1P1-201ENST00000555205 166 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 AC091152.3-201ENST00000604227 325 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 Z82243.1-201ENST00000609432 473 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 U4.5-201ENST00000617137 123 ntBASIC1.28□□□□□ -2.2
SHROOM3Q8TF72 RNA5SP257-201ENST00000363023 116 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 Y_RNA.151-201ENST00000363566 112 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 MIR625-201ENST00000385047 85 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 FCF1P9-201ENST00000412546 282 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 AC097463.2-201ENST00000421074 142 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 RPL23AP95-201ENST00000426806 265 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 MTND1P2-201ENST00000430604 821 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 PSPHP1-201ENST00000450062 261 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 Y_RNA.665-201ENST00000516177 98 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 SNORA43.2-201ENST00000516652 128 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 RNU6-323P-201ENST00000521915 107 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 AC026371.1-201ENST00000551867 419 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 TPRKBP2-201ENST00000565969 475 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 AC090517.1-201ENST00000569307 266 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 MIR3941-201ENST00000582572 103 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 OR1M4P-201ENST00000589199 287 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 CTHRC1P1-201ENST00000605383 469 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 AC009233.1-201ENST00000616477 371 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 AL159153.1-201ENST00000619688 317 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 MIR3529-201ENST00000637713 78 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 RNU6-451P-201ENST00000362921 107 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 Y_RNA.89-201ENST00000363031 102 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 RNU6-534P-201ENST00000364877 106 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 RNU6-827P-201ENST00000365553 106 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 RNU6-483P-201ENST00000384088 108 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 MIR95-201ENST00000385072 81 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 AC005534.2-201ENST00000431047 433 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 AL606489.2-201ENST00000433886 234 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 RNU6-1332P-201ENST00000516666 104 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 RNU6-273P-201ENST00000516937 96 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 AL355297.2-201ENST00000604792 129 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 AL138963.2-201ENST00000605137 226 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 AC103810.9-201ENST00000606688 112 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 AC096772.1-201ENST00000609146 564 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 AC064836.2-201ENST00000609491 462 ntBASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.27□□□□□ -2.21
SHROOM3Q8TF72 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 Y_RNA.167-201ENST00000363735 109 ntBASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 RNU6-1303P-201ENST00000364841 107 ntBASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 SNORA18.2-201ENST00000383865 132 ntBASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 SNORA32.2-201ENST00000384049 122 ntBASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 RNU6-45P-201ENST00000384471 107 ntBASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 RNU6-1105P-201ENST00000384774 107 ntBASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 RPS20P15-201ENST00000412792 311 ntBASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 AL117339.3-201ENST00000418733 162 ntBASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 AIMP1P2-201ENST00000425294 312 ntBASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 AL445305.1-201ENST00000432577 575 ntBASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 ERLEC1P1-201ENST00000433806 578 ntBASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 AC244670.1-201ENST00000436879 112 ntBASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 MTND1P18-201ENST00000448191 573 ntBASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 RPL31P58-201ENST00000469001 379 ntBASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 HMGB3P17-201ENST00000504195 649 ntBASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 Y_RNA.693-201ENST00000516641 110 ntBASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 TRAV32-201ENST00000553993 340 ntBASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 AC025165.5-201ENST00000602802 578 ntBASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 ELOCP5-201ENST00000604924 333 ntBASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 AF250324.2-201ENST00000608299 610 ntBASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 AL133215.3-201ENST00000609801 448 ntBASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.26□□□□□ -2.21
SHROOM3Q8TF72 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 Y_RNA.9-201ENST00000362354 101 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 SNORD114-19-201ENST00000363072 75 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 SNORA3A-201ENST00000364113 130 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 Y_RNA.399-201ENST00000383955 105 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 RNU6-203P-201ENST00000384038 104 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 AL133475.1-201ENST00000404414 305 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 MIR548F1-201ENST00000408667 84 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 AL161651.1-201ENST00000440882 223 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 GPM6BP3-201ENST00000442797 145 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 AL357134.1-201ENST00000445848 426 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 SNRPGP7-201ENST00000469016 106 ntBASIC1.25□□□□□ -2.21
SHROOM3Q8TF72 AF186996.7-201ENST00000492781 209 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms