Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 RNU6-797P-201ENST00000363101 109 ntBASIC1.69□□□□□ -2.14
LINC01006Q8NI28 SNORA38-201ENST00000363946 132 ntBASIC1.69□□□□□ -2.14
LINC01006Q8NI28 RNA5SP125-201ENST00000364843 120 ntBASIC1.69□□□□□ -2.14
LINC01006Q8NI28 RNU6-596P-201ENST00000365395 98 ntBASIC1.69□□□□□ -2.14
LINC01006Q8NI28 Y_RNA.419-201ENST00000384041 102 ntBASIC1.69□□□□□ -2.14
LINC01006Q8NI28 RNU6-890P-201ENST00000384121 107 ntBASIC1.69□□□□□ -2.14
LINC01006Q8NI28 SNORA12-201ENST00000391162 147 ntBASIC1.69□□□□□ -2.14
LINC01006Q8NI28 CBX3P9-201ENST00000402326 552 ntBASIC1.69□□□□□ -2.14
LINC01006Q8NI28 AC243428.1-201ENST00000421099 264 ntBASIC1.69□□□□□ -2.14
LINC01006Q8NI28 AL358453.1-201ENST00000422522 250 ntBASIC1.69□□□□□ -2.14
LINC01006Q8NI28 EIF4EP2-201ENST00000422816 654 ntBASIC1.69□□□□□ -2.14
LINC01006Q8NI28 USMG5P1-201ENST00000425964 177 ntBASIC1.69□□□□□ -2.14
LINC01006Q8NI28 AC078809.1-201ENST00000427601 140 ntBASIC1.69□□□□□ -2.14
LINC01006Q8NI28 MTCO3P29-201ENST00000432119 779 ntBASIC1.69□□□□□ -2.14
LINC01006Q8NI28 RPL30P15-201ENST00000457129 321 ntBASIC1.69□□□□□ -2.14
LINC01006Q8NI28 AC022447.4-201ENST00000504053 364 ntBASIC1.69□□□□□ -2.14
LINC01006Q8NI28 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.69□□□□□ -2.14
LINC01006Q8NI28 RNU6-991P-201ENST00000516168 107 ntBASIC1.69□□□□□ -2.14
LINC01006Q8NI28 RNU6-548P-201ENST00000517083 115 ntBASIC1.69□□□□□ -2.14
LINC01006Q8NI28 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.69□□□□□ -2.14
LINC01006Q8NI28 MIR4273-201ENST00000582824 84 ntBASIC1.69□□□□□ -2.14
LINC01006Q8NI28 MIR4658-201ENST00000584344 65 ntBASIC1.69□□□□□ -2.14
LINC01006Q8NI28 AC010928.2-201ENST00000588017 287 ntBASIC1.69□□□□□ -2.14
LINC01006Q8NI28 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.69□□□□□ -2.14
LINC01006Q8NI28 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LINC01006Q8NI28 AC233981.2-201ENST00000611524 1614 ntBASIC1.69□□□□□ -2.14
LINC01006Q8NI28 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.69□□□□□ -2.14
LINC01006Q8NI28 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LINC01006Q8NI28 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.68□□□□□ -2.14
LINC01006Q8NI28 MIR6073-201ENST00000352083 89 ntBASIC1.68□□□□□ -2.14
LINC01006Q8NI28 RNU5B-2P-201ENST00000363036 113 ntBASIC1.68□□□□□ -2.14
LINC01006Q8NI28 RNU6-944P-201ENST00000364023 107 ntBASIC1.68□□□□□ -2.14
LINC01006Q8NI28 MIR549A-201ENST00000385268 96 ntBASIC1.68□□□□□ -2.14
LINC01006Q8NI28 SNORA48.3-201ENST00000391081 134 ntBASIC1.68□□□□□ -2.14
LINC01006Q8NI28 MTCYBP4-201ENST00000401524 249 ntBASIC1.68□□□□□ -2.14
LINC01006Q8NI28 RNA5SP181-201ENST00000410246 98 ntBASIC1.68□□□□□ -2.14
LINC01006Q8NI28 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC01006Q8NI28 EIF1AXP1-201ENST00000419267 435 ntBASIC1.68□□□□□ -2.14
LINC01006Q8NI28 AF228730.4-201ENST00000421457 183 ntBASIC1.68□□□□□ -2.14
LINC01006Q8NI28 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC01006Q8NI28 AL445646.1-201ENST00000431784 216 ntBASIC1.68□□□□□ -2.14
LINC01006Q8NI28 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.68□□□□□ -2.14
LINC01006Q8NI28 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.68□□□□□ -2.14
LINC01006Q8NI28 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
LINC01006Q8NI28 HMGN2P23-201ENST00000456759 269 ntBASIC1.68□□□□□ -2.14
LINC01006Q8NI28 AC145146.1-201ENST00000496370 254 ntBASIC1.68□□□□□ -2.14
LINC01006Q8NI28 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC01006Q8NI28 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.68□□□□□ -2.14
LINC01006Q8NI28 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.68□□□□□ -2.14
LINC01006Q8NI28 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC01006Q8NI28 MIR5696-201ENST00000578474 85 ntBASIC1.68□□□□□ -2.14
LINC01006Q8NI28 AL133255.1-201ENST00000606374 441 ntBASIC1.68□□□□□ -2.14
LINC01006Q8NI28 MTND4P29-201ENST00000503122 1372 ntBASIC1.68□□□□□ -2.14
LINC01006Q8NI28 AC006026.1-201ENST00000444025 1803 ntBASIC1.68□□□□□ -2.14
LINC01006Q8NI28 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
LINC01006Q8NI28 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
LINC01006Q8NI28 RNU1-23P-201ENST00000363361 144 ntBASIC1.67□□□□□ -2.14
LINC01006Q8NI28 Y_RNA.394-201ENST00000383942 103 ntBASIC1.67□□□□□ -2.14
LINC01006Q8NI28 Y_RNA.535-201ENST00000384612 99 ntBASIC1.67□□□□□ -2.14
LINC01006Q8NI28 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
LINC01006Q8NI28 SNORA46.1-201ENST00000391069 153 ntBASIC1.67□□□□□ -2.14
LINC01006Q8NI28 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.67□□□□□ -2.14
LINC01006Q8NI28 RNA5SP494-201ENST00000410653 129 ntBASIC1.67□□□□□ -2.14
LINC01006Q8NI28 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.67□□□□□ -2.14
LINC01006Q8NI28 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC01006Q8NI28 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC01006Q8NI28 Y_RNA.653-201ENST00000459091 95 ntBASIC1.67□□□□□ -2.14
LINC01006Q8NI28 AC087477.1-201ENST00000465747 340 ntBASIC1.67□□□□□ -2.14
LINC01006Q8NI28 RPL30P10-201ENST00000488148 337 ntBASIC1.67□□□□□ -2.14
LINC01006Q8NI28 RPL23AP75-201ENST00000491601 451 ntBASIC1.67□□□□□ -2.14
LINC01006Q8NI28 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.67□□□□□ -2.14
LINC01006Q8NI28 RNU6-295P-201ENST00000516901 104 ntBASIC1.67□□□□□ -2.14
LINC01006Q8NI28 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.67□□□□□ -2.14
LINC01006Q8NI28 AC021231.3-201ENST00000558497 370 ntBASIC1.67□□□□□ -2.14
LINC01006Q8NI28 MIR4446-201ENST00000578505 67 ntBASIC1.67□□□□□ -2.14
LINC01006Q8NI28 MIR3136-201ENST00000583498 78 ntBASIC1.67□□□□□ -2.14
LINC01006Q8NI28 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
LINC01006Q8NI28 AL670379.2-201ENST00000604983 252 ntBASIC1.67□□□□□ -2.14
LINC01006Q8NI28 AL138963.2-201ENST00000605137 226 ntBASIC1.67□□□□□ -2.14
LINC01006Q8NI28 AL050343.2-201ENST00000607338 280 ntBASIC1.67□□□□□ -2.14
LINC01006Q8NI28 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.67□□□□□ -2.14
LINC01006Q8NI28 MIR5739-201ENST00000619803 80 ntBASIC1.67□□□□□ -2.14
LINC01006Q8NI28 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.67□□□□□ -2.14
LINC01006Q8NI28 ZNF299P-201ENST00000406845 1804 ntBASIC1.67□□□□□ -2.14
LINC01006Q8NI28 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC01006Q8NI28 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LINC01006Q8NI28 RNU6-595P-201ENST00000363944 107 ntBASIC1.66□□□□□ -2.14
LINC01006Q8NI28 RNU6-142P-201ENST00000384019 107 ntBASIC1.66□□□□□ -2.14
LINC01006Q8NI28 RNU6-378P-201ENST00000384324 107 ntBASIC1.66□□□□□ -2.14
LINC01006Q8NI28 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
LINC01006Q8NI28 U8.13-201ENST00000390842 128 ntBASIC1.66□□□□□ -2.14
LINC01006Q8NI28 RNA5SP201-201ENST00000410316 124 ntBASIC1.66□□□□□ -2.14
LINC01006Q8NI28 RNU2-63P-201ENST00000410792 194 ntBASIC1.66□□□□□ -2.14
LINC01006Q8NI28 HMGB3P2-201ENST00000411913 584 ntBASIC1.66□□□□□ -2.14
LINC01006Q8NI28 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.66□□□□□ -2.14
LINC01006Q8NI28 AC012306.1-201ENST00000423267 114 ntBASIC1.66□□□□□ -2.14
LINC01006Q8NI28 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.66□□□□□ -2.14
LINC01006Q8NI28 RPL23AP50-201ENST00000434149 455 ntBASIC1.66□□□□□ -2.14
LINC01006Q8NI28 AL603825.1-201ENST00000438481 80 ntBASIC1.66□□□□□ -2.14
LINC01006Q8NI28 CYP2C59P-201ENST00000457790 269 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms