Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
HIPK4Q8NE63 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.16□□□□□ -1.9
HIPK4Q8NE63 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
HIPK4Q8NE63 snoU2_19.1-201ENST00000362361 80 ntBASIC3.16□□□□□ -1.9
HIPK4Q8NE63 Y_RNA.44-201ENST00000362676 108 ntBASIC3.16□□□□□ -1.9
HIPK4Q8NE63 Y_RNA.331-201ENST00000365267 102 ntBASIC3.16□□□□□ -1.9
HIPK4Q8NE63 MIR320B2-201ENST00000408479 138 ntBASIC3.16□□□□□ -1.9
HIPK4Q8NE63 AL139156.1-201ENST00000412785 841 ntBASIC3.16□□□□□ -1.9
HIPK4Q8NE63 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.16□□□□□ -1.9
HIPK4Q8NE63 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.16□□□□□ -1.9
HIPK4Q8NE63 AC097463.2-201ENST00000421074 142 ntBASIC3.16□□□□□ -1.9
HIPK4Q8NE63 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.16□□□□□ -1.9
HIPK4Q8NE63 EIF4EP4-201ENST00000424916 578 ntBASIC3.16□□□□□ -1.9
HIPK4Q8NE63 AL445584.1-201ENST00000431451 330 ntBASIC3.16□□□□□ -1.9
HIPK4Q8NE63 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.16□□□□□ -1.9
HIPK4Q8NE63 SCARNA17.1-201ENST00000516211 143 ntBASIC3.16□□□□□ -1.9
HIPK4Q8NE63 SCARNA17.2-201ENST00000516334 143 ntBASIC3.16□□□□□ -1.9
HIPK4Q8NE63 RN7SKP282-201ENST00000516824 299 ntBASIC3.16□□□□□ -1.9
HIPK4Q8NE63 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.16□□□□□ -1.9
HIPK4Q8NE63 AC019176.2-201ENST00000611579 315 ntBASIC3.16□□□□□ -1.9
HIPK4Q8NE63 SCARNA17.4-201ENST00000614296 143 ntBASIC3.16□□□□□ -1.9
HIPK4Q8NE63 AL590240.4-201ENST00000616908 390 ntBASIC3.16□□□□□ -1.9
HIPK4Q8NE63 AC005562.2-201ENST00000618264 111 ntBASIC3.16□□□□□ -1.9
HIPK4Q8NE63 CR392039.5-201ENST00000623201 510 ntBASIC3.16□□□□□ -1.9
HIPK4Q8NE63 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.16□□□□□ -1.9
HIPK4Q8NE63 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
HIPK4Q8NE63 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.15□□□□□ -1.9
HIPK4Q8NE63 AC069528.2-201ENST00000624849 1991 ntBASIC3.15□□□□□ -1.91
HIPK4Q8NE63 Y_RNA.101-201ENST00000363154 102 ntBASIC3.15□□□□□ -1.91
HIPK4Q8NE63 Y_RNA.274-201ENST00000364714 101 ntBASIC3.15□□□□□ -1.91
HIPK4Q8NE63 Y_RNA.418-201ENST00000384029 102 ntBASIC3.15□□□□□ -1.91
HIPK4Q8NE63 Y_RNA.785-201ENST00000384290 109 ntBASIC3.15□□□□□ -1.91
HIPK4Q8NE63 Y_RNA.498-201ENST00000384460 102 ntBASIC3.15□□□□□ -1.91
HIPK4Q8NE63 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.15□□□□□ -1.91
HIPK4Q8NE63 AC027124.2-201ENST00000428249 105 ntBASIC3.15□□□□□ -1.91
HIPK4Q8NE63 MRPS36P2-201ENST00000512569 299 ntBASIC3.15□□□□□ -1.91
HIPK4Q8NE63 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.15□□□□□ -1.91
HIPK4Q8NE63 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.15□□□□□ -1.91
HIPK4Q8NE63 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.15□□□□□ -1.91
HIPK4Q8NE63 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.15□□□□□ -1.91
HIPK4Q8NE63 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HIPK4Q8NE63 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.15□□□□□ -1.91
HIPK4Q8NE63 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
HIPK4Q8NE63 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.14□□□□□ -1.91
HIPK4Q8NE63 AC026241.1-201ENST00000517873 2142 ntBASIC3.14□□□□□ -1.91
HIPK4Q8NE63 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.14□□□□□ -1.91
HIPK4Q8NE63 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HIPK4Q8NE63 Y_RNA.76-201ENST00000362931 109 ntBASIC3.14□□□□□ -1.91
HIPK4Q8NE63 Y_RNA.136-201ENST00000363444 102 ntBASIC3.14□□□□□ -1.91
HIPK4Q8NE63 SNORA62.3-201ENST00000365110 153 ntBASIC3.14□□□□□ -1.91
HIPK4Q8NE63 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
HIPK4Q8NE63 SNORA18.2-201ENST00000383865 132 ntBASIC3.14□□□□□ -1.91
HIPK4Q8NE63 Y_RNA.415-201ENST00000384012 112 ntBASIC3.14□□□□□ -1.91
HIPK4Q8NE63 SNORA12-201ENST00000391162 147 ntBASIC3.14□□□□□ -1.91
HIPK4Q8NE63 RPL23AP36-201ENST00000413895 458 ntBASIC3.14□□□□□ -1.91
HIPK4Q8NE63 MTND5P15-201ENST00000434246 349 ntBASIC3.14□□□□□ -1.91
HIPK4Q8NE63 AC244505.4-201ENST00000434905 287 ntBASIC3.14□□□□□ -1.91
HIPK4Q8NE63 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.14□□□□□ -1.91
HIPK4Q8NE63 AC004386.2-201ENST00000441858 148 ntBASIC3.14□□□□□ -1.91
HIPK4Q8NE63 SSXP5-201ENST00000443473 287 ntBASIC3.14□□□□□ -1.91
HIPK4Q8NE63 MRPS10P1-201ENST00000448483 130 ntBASIC3.14□□□□□ -1.91
HIPK4Q8NE63 UQCRHP3-201ENST00000451503 251 ntBASIC3.14□□□□□ -1.91
HIPK4Q8NE63 AC093663.1-201ENST00000497190 394 ntBASIC3.14□□□□□ -1.91
HIPK4Q8NE63 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.14□□□□□ -1.91
HIPK4Q8NE63 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.14□□□□□ -1.91
HIPK4Q8NE63 AC011471.1-201ENST00000585766 187 ntBASIC3.14□□□□□ -1.91
HIPK4Q8NE63 uc_338.1-201ENST00000612113 180 ntBASIC3.14□□□□□ -1.91
HIPK4Q8NE63 TCL6_2.1-201ENST00000615162 119 ntBASIC3.14□□□□□ -1.91
HIPK4Q8NE63 UCA1.1-201ENST00000620952 75 ntBASIC3.14□□□□□ -1.91
HIPK4Q8NE63 AC006001.4-201ENST00000622243 395 ntBASIC3.14□□□□□ -1.91
HIPK4Q8NE63 AC091932.3-201ENST00000624223 323 ntBASIC3.14□□□□□ -1.91
HIPK4Q8NE63 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.13□□□□□ -1.91
HIPK4Q8NE63 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HIPK4Q8NE63 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HIPK4Q8NE63 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HIPK4Q8NE63 MIR410-201ENST00000362222 80 ntBASIC3.13□□□□□ -1.91
HIPK4Q8NE63 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.13□□□□□ -1.91
HIPK4Q8NE63 SNORA46-201ENST00000384762 135 ntBASIC3.13□□□□□ -1.91
HIPK4Q8NE63 RNA5SP504-201ENST00000410676 117 ntBASIC3.13□□□□□ -1.91
HIPK4Q8NE63 RNU6-1199P-201ENST00000411249 104 ntBASIC3.13□□□□□ -1.91
HIPK4Q8NE63 MTCO1P5-201ENST00000433573 344 ntBASIC3.13□□□□□ -1.91
HIPK4Q8NE63 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.13□□□□□ -1.91
HIPK4Q8NE63 AC005042.3-201ENST00000453230 174 ntBASIC3.13□□□□□ -1.91
HIPK4Q8NE63 FCF1P8-201ENST00000510322 597 ntBASIC3.13□□□□□ -1.91
HIPK4Q8NE63 RNU6-344P-201ENST00000516635 111 ntBASIC3.13□□□□□ -1.91
HIPK4Q8NE63 Y_RNA.700-201ENST00000516806 100 ntBASIC3.13□□□□□ -1.91
HIPK4Q8NE63 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.13□□□□□ -1.91
HIPK4Q8NE63 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.13□□□□□ -1.91
HIPK4Q8NE63 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.13□□□□□ -1.91
HIPK4Q8NE63 MIR4765-201ENST00000585007 77 ntBASIC3.13□□□□□ -1.91
HIPK4Q8NE63 AC037487.3-201ENST00000606668 112 ntBASIC3.13□□□□□ -1.91
HIPK4Q8NE63 AC004467.1-201ENST00000615678 330 ntBASIC3.13□□□□□ -1.91
HIPK4Q8NE63 AC034229.5-201ENST00000624258 185 ntBASIC3.13□□□□□ -1.91
HIPK4Q8NE63 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
HIPK4Q8NE63 AC008264.2-201ENST00000610193 3731 ntBASIC3.13□□□□□ -1.91
HIPK4Q8NE63 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.12□□□□□ -1.91
HIPK4Q8NE63 SNORA25.1-201ENST00000362326 128 ntBASIC3.12□□□□□ -1.91
HIPK4Q8NE63 RNA5SP139-201ENST00000364340 117 ntBASIC3.12□□□□□ -1.91
HIPK4Q8NE63 RNU6-740P-201ENST00000364734 105 ntBASIC3.12□□□□□ -1.91
HIPK4Q8NE63 SNORA72.2-201ENST00000365028 127 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 184.4 ms