Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.61□□□□□ -1.99
USP38Q8NB14 AC026436.1-201ENST00000510537 270 ntBASIC2.61□□□□□ -1.99
USP38Q8NB14 AC026782.1-201ENST00000512952 449 ntBASIC2.61□□□□□ -1.99
USP38Q8NB14 Y_RNA.670-201ENST00000516255 105 ntBASIC2.61□□□□□ -1.99
USP38Q8NB14 Y_RNA.708-201ENST00000516950 96 ntBASIC2.61□□□□□ -1.99
USP38Q8NB14 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.61□□□□□ -1.99
USP38Q8NB14 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.61□□□□□ -1.99
USP38Q8NB14 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.61□□□□□ -1.99
USP38Q8NB14 AC025253.1-201ENST00000613623 543 ntBASIC2.61□□□□□ -1.99
USP38Q8NB14 MIR8070-201ENST00000616510 88 ntBASIC2.61□□□□□ -1.99
USP38Q8NB14 MIR1302-1-201ENST00000637932 143 ntBASIC2.61□□□□□ -1.99
USP38Q8NB14 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
USP38Q8NB14 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.61□□□□□ -1.99
USP38Q8NB14 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
USP38Q8NB14 RNU6-842P-201ENST00000384269 107 ntBASIC2.6□□□□□ -1.99
USP38Q8NB14 Y_RNA.533-201ENST00000384596 114 ntBASIC2.6□□□□□ -1.99
USP38Q8NB14 MIR499A-201ENST00000384903 122 ntBASIC2.6□□□□□ -1.99
USP38Q8NB14 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
USP38Q8NB14 RNU6-1093P-201ENST00000391194 107 ntBASIC2.6□□□□□ -1.99
USP38Q8NB14 RNU2-32P-201ENST00000411193 191 ntBASIC2.6□□□□□ -1.99
USP38Q8NB14 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.6□□□□□ -1.99
USP38Q8NB14 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.6□□□□□ -1.99
USP38Q8NB14 CYCSP49-201ENST00000420810 319 ntBASIC2.6□□□□□ -1.99
USP38Q8NB14 RPL23AP50-201ENST00000434149 455 ntBASIC2.6□□□□□ -1.99
USP38Q8NB14 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.6□□□□□ -1.99
USP38Q8NB14 SNORD5.1-201ENST00000458800 75 ntBASIC2.6□□□□□ -1.99
USP38Q8NB14 HMGB3P3-201ENST00000510526 400 ntBASIC2.6□□□□□ -1.99
USP38Q8NB14 RNU6-559P-201ENST00000516151 98 ntBASIC2.6□□□□□ -1.99
USP38Q8NB14 RNU6-1213P-201ENST00000517075 94 ntBASIC2.6□□□□□ -1.99
USP38Q8NB14 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.6□□□□□ -1.99
USP38Q8NB14 SNRPGP18-201ENST00000553000 214 ntBASIC2.6□□□□□ -1.99
USP38Q8NB14 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.6□□□□□ -1.99
USP38Q8NB14 CYP4A27P-201ENST00000567218 190 ntBASIC2.6□□□□□ -1.99
USP38Q8NB14 MIR5007-201ENST00000583098 95 ntBASIC2.6□□□□□ -1.99
USP38Q8NB14 AC011494.1-201ENST00000596454 237 ntBASIC2.6□□□□□ -1.99
USP38Q8NB14 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.6□□□□□ -1.99
USP38Q8NB14 AC113139.1-201ENST00000605049 239 ntBASIC2.6□□□□□ -1.99
USP38Q8NB14 MIR6873-201ENST00000622788 63 ntBASIC2.6□□□□□ -1.99
USP38Q8NB14 AL008636.1-201ENST00000625038 1018 ntBASIC2.6□□□□□ -1.99
USP38Q8NB14 Z82195.2-201ENST00000612348 18351 ntBASIC2.59□□□□□ -1.99
USP38Q8NB14 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
USP38Q8NB14 MIR21-201ENST00000362134 72 ntBASIC2.59□□□□□ -1.99
USP38Q8NB14 RNU6-743P-201ENST00000364151 106 ntBASIC2.59□□□□□ -1.99
USP38Q8NB14 RNU6-378P-201ENST00000384324 107 ntBASIC2.59□□□□□ -1.99
USP38Q8NB14 Y_RNA.529-201ENST00000384586 119 ntBASIC2.59□□□□□ -1.99
USP38Q8NB14 MIR561-201ENST00000385216 97 ntBASIC2.59□□□□□ -1.99
USP38Q8NB14 SNORA46.1-201ENST00000391069 153 ntBASIC2.59□□□□□ -1.99
USP38Q8NB14 SNORA26.3-201ENST00000391119 136 ntBASIC2.59□□□□□ -1.99
USP38Q8NB14 AC108667.1-201ENST00000428618 249 ntBASIC2.59□□□□□ -1.99
USP38Q8NB14 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.59□□□□□ -1.99
USP38Q8NB14 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.59□□□□□ -1.99
USP38Q8NB14 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.59□□□□□ -1.99
USP38Q8NB14 AC005741.1-201ENST00000511094 432 ntBASIC2.59□□□□□ -1.99
USP38Q8NB14 MIR449C-201ENST00000516047 92 ntBASIC2.59□□□□□ -1.99
USP38Q8NB14 RNU6-295P-201ENST00000516901 104 ntBASIC2.59□□□□□ -1.99
USP38Q8NB14 AC067747.1-201ENST00000608026 250 ntBASIC2.59□□□□□ -1.99
USP38Q8NB14 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
USP38Q8NB14 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
USP38Q8NB14 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.58□□□□□ -2
USP38Q8NB14 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.58□□□□□ -2
USP38Q8NB14 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
USP38Q8NB14 RNU6-867P-201ENST00000364956 107 ntBASIC2.58□□□□□ -2
USP38Q8NB14 Y_RNA.384-201ENST00000383909 102 ntBASIC2.58□□□□□ -2
USP38Q8NB14 RNU6-546P-201ENST00000383991 107 ntBASIC2.58□□□□□ -2
USP38Q8NB14 SNORA75.4-201ENST00000391278 119 ntBASIC2.58□□□□□ -2
USP38Q8NB14 EIF4EP2-201ENST00000422816 654 ntBASIC2.58□□□□□ -2
USP38Q8NB14 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.58□□□□□ -2
USP38Q8NB14 AC009238.1-201ENST00000442165 424 ntBASIC2.58□□□□□ -2
USP38Q8NB14 AC009237.6-201ENST00000446969 424 ntBASIC2.58□□□□□ -2
USP38Q8NB14 AC079354.2-201ENST00000453523 154 ntBASIC2.58□□□□□ -2
USP38Q8NB14 AC087477.1-201ENST00000465747 340 ntBASIC2.58□□□□□ -2
USP38Q8NB14 RPL23AP75-201ENST00000491601 451 ntBASIC2.58□□□□□ -2
USP38Q8NB14 AF186996.7-201ENST00000492781 209 ntBASIC2.58□□□□□ -2
USP38Q8NB14 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.58□□□□□ -2
USP38Q8NB14 SNORA48.11-201ENST00000517015 89 ntBASIC2.58□□□□□ -2
USP38Q8NB14 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.58□□□□□ -2
USP38Q8NB14 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.58□□□□□ -2
USP38Q8NB14 RPS3AP23-202ENST00000574601 686 ntBASIC2.58□□□□□ -2
USP38Q8NB14 7SK.7-201ENST00000603504 247 ntBASIC2.58□□□□□ -2
USP38Q8NB14 AL132765.2-201ENST00000610812 351 ntBASIC2.58□□□□□ -2
USP38Q8NB14 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
USP38Q8NB14 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
USP38Q8NB14 KPNA2P1-201ENST00000458289 1591 ntBASIC2.57□□□□□ -2
USP38Q8NB14 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
USP38Q8NB14 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
USP38Q8NB14 Y_RNA.122-201ENST00000363331 96 ntBASIC2.57□□□□□ -2
USP38Q8NB14 U3.9-201ENST00000363823 204 ntBASIC2.57□□□□□ -2
USP38Q8NB14 RNU6-331P-201ENST00000384724 107 ntBASIC2.57□□□□□ -2
USP38Q8NB14 MIR95-201ENST00000385072 81 ntBASIC2.57□□□□□ -2
USP38Q8NB14 RNU6-174P-201ENST00000410406 106 ntBASIC2.57□□□□□ -2
USP38Q8NB14 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.57□□□□□ -2
USP38Q8NB14 IGLV3-17-201ENST00000519099 244 ntBASIC2.57□□□□□ -2
USP38Q8NB14 CBX3P8-201ENST00000532412 525 ntBASIC2.57□□□□□ -2
USP38Q8NB14 AC016256.1-201ENST00000547971 354 ntBASIC2.57□□□□□ -2
USP38Q8NB14 AC121758.2-201ENST00000553271 193 ntBASIC2.57□□□□□ -2
USP38Q8NB14 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.57□□□□□ -2
USP38Q8NB14 AP000654.2-201ENST00000605633 586 ntBASIC2.57□□□□□ -2
USP38Q8NB14 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.57□□□□□ -2
USP38Q8NB14 PCGEM1.1-201ENST00000613431 131 ntBASIC2.57□□□□□ -2
USP38Q8NB14 MIR6895-201ENST00000613497 78 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms