Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 RNU6-1093P-201ENST00000391194 107 ntBASIC1.97□□□□□ -2.09
CCDC63Q8NA47 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC63Q8NA47 MIR548K-201ENST00000408406 116 ntBASIC1.97□□□□□ -2.09
CCDC63Q8NA47 AL139156.1-201ENST00000412785 841 ntBASIC1.97□□□□□ -2.09
CCDC63Q8NA47 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.97□□□□□ -2.09
CCDC63Q8NA47 HMGN2P18-201ENST00000450680 270 ntBASIC1.97□□□□□ -2.09
CCDC63Q8NA47 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC63Q8NA47 AC087477.1-201ENST00000465747 340 ntBASIC1.97□□□□□ -2.09
CCDC63Q8NA47 RPL23AP42-201ENST00000471152 471 ntBASIC1.97□□□□□ -2.09
CCDC63Q8NA47 AC132942.1-201ENST00000486753 483 ntBASIC1.97□□□□□ -2.09
CCDC63Q8NA47 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC63Q8NA47 RNU6-1098P-201ENST00000516772 96 ntBASIC1.97□□□□□ -2.09
CCDC63Q8NA47 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC63Q8NA47 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC63Q8NA47 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.97□□□□□ -2.09
CCDC63Q8NA47 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC63Q8NA47 AC010928.2-201ENST00000588017 287 ntBASIC1.97□□□□□ -2.09
CCDC63Q8NA47 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC63Q8NA47 AL022345.1-201ENST00000607292 135 ntBASIC1.97□□□□□ -2.09
CCDC63Q8NA47 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC63Q8NA47 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CCDC63Q8NA47 RNU1-76P-201ENST00000362903 159 ntBASIC1.96□□□□□ -2.1
CCDC63Q8NA47 Y_RNA.184-201ENST00000363884 108 ntBASIC1.96□□□□□ -2.1
CCDC63Q8NA47 RNU6-1164P-201ENST00000364428 107 ntBASIC1.96□□□□□ -2.1
CCDC63Q8NA47 Y_RNA.339-201ENST00000365325 102 ntBASIC1.96□□□□□ -2.1
CCDC63Q8NA47 MIR29C-201ENST00000385231 88 ntBASIC1.96□□□□□ -2.1
CCDC63Q8NA47 MIR1283-2-201ENST00000408621 87 ntBASIC1.96□□□□□ -2.1
CCDC63Q8NA47 RNA5SP450-201ENST00000411206 102 ntBASIC1.96□□□□□ -2.1
CCDC63Q8NA47 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC63Q8NA47 EIF4EP2-201ENST00000422816 654 ntBASIC1.96□□□□□ -2.1
CCDC63Q8NA47 USP9YP30-201ENST00000430729 455 ntBASIC1.96□□□□□ -2.1
CCDC63Q8NA47 Z82188.1-201ENST00000436709 154 ntBASIC1.96□□□□□ -2.1
CCDC63Q8NA47 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC63Q8NA47 AL353705.4-201ENST00000449661 238 ntBASIC1.96□□□□□ -2.1
CCDC63Q8NA47 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC63Q8NA47 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.96□□□□□ -2.1
CCDC63Q8NA47 FO393415.2-201ENST00000480085 343 ntBASIC1.96□□□□□ -2.1
CCDC63Q8NA47 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CCDC63Q8NA47 AC046134.1-201ENST00000514454 666 ntBASIC1.96□□□□□ -2.1
CCDC63Q8NA47 ACA59.1-201ENST00000515966 143 ntBASIC1.96□□□□□ -2.1
CCDC63Q8NA47 AC090517.1-201ENST00000569307 266 ntBASIC1.96□□□□□ -2.1
CCDC63Q8NA47 AC016727.2-201ENST00000603988 621 ntBASIC1.96□□□□□ -2.1
CCDC63Q8NA47 MIR6128-201ENST00000615528 109 ntBASIC1.96□□□□□ -2.1
CCDC63Q8NA47 SCARNA4-201ENST00000629045 128 ntBASIC1.96□□□□□ -2.1
CCDC63Q8NA47 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.96□□□□□ -2.1
CCDC63Q8NA47 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CCDC63Q8NA47 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
CCDC63Q8NA47 RNU6-845P-201ENST00000362578 103 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 SNORD115-3-201ENST00000363100 82 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 Y_RNA.332-201ENST00000365271 113 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 RNU6-767P-201ENST00000384132 107 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 U8.10-201ENST00000384260 133 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 RNU6-842P-201ENST00000384269 107 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 MIR549A-201ENST00000385268 96 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CCDC63Q8NA47 SNORA12.2-201ENST00000391040 156 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 RNU6-876P-201ENST00000391295 104 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 AL512604.1-201ENST00000404812 257 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 MIR548F5-201ENST00000408421 86 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 RNU6-174P-201ENST00000410406 106 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 PDCL2P1-201ENST00000419302 352 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 AC096920.1-201ENST00000423991 241 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 OR2AQ1P-201ENST00000451972 200 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 SNORD5.1-201ENST00000458800 75 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 TOMM22P6-201ENST00000465035 409 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 AC116337.1-201ENST00000509680 687 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 RNU7-30P-201ENST00000516835 62 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 RNA5SP490-201ENST00000517141 136 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC63Q8NA47 IGKV3-31-201ENST00000523109 329 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 AP002770.2-201ENST00000543613 532 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC63Q8NA47 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC63Q8NA47 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.95□□□□□ -2.1
CCDC63Q8NA47 MIR5696-201ENST00000578474 85 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 MIR5089-201ENST00000580047 84 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 AL158827.2-201ENST00000602494 330 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.95□□□□□ -2.1
CCDC63Q8NA47 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 AL691447.3-201ENST00000635020 330 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 MTND5P9-201ENST00000503854 1755 ntBASIC1.95□□□□□ -2.1
CCDC63Q8NA47 ZNF702P-202ENST00000434269 1966 ntBASIC1.94□□□□□ -2.1
CCDC63Q8NA47 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.94□□□□□ -2.1
CCDC63Q8NA47 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CCDC63Q8NA47 MIR340-201ENST00000362125 95 ntBASIC1.94□□□□□ -2.1
CCDC63Q8NA47 Y_RNA.99-201ENST00000363138 105 ntBASIC1.94□□□□□ -2.1
CCDC63Q8NA47 RNU6-596P-201ENST00000365395 98 ntBASIC1.94□□□□□ -2.1
CCDC63Q8NA47 XGY1-201ENST00000381172 446 ntBASIC1.94□□□□□ -2.1
CCDC63Q8NA47 SNORA18.2-201ENST00000383865 132 ntBASIC1.94□□□□□ -2.1
CCDC63Q8NA47 AL357139.1-201ENST00000407792 426 ntBASIC1.94□□□□□ -2.1
CCDC63Q8NA47 RN7SKP32-201ENST00000410167 303 ntBASIC1.94□□□□□ -2.1
CCDC63Q8NA47 RN7SKP284-201ENST00000411002 343 ntBASIC1.94□□□□□ -2.1
CCDC63Q8NA47 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CCDC63Q8NA47 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC63Q8NA47 RPL21P111-201ENST00000418453 477 ntBASIC1.94□□□□□ -2.1
CCDC63Q8NA47 AL139396.1-201ENST00000421137 167 ntBASIC1.94□□□□□ -2.1
CCDC63Q8NA47 BX510359.4-201ENST00000423750 193 ntBASIC1.94□□□□□ -2.1
CCDC63Q8NA47 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC63Q8NA47 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC63Q8NA47 MTND2P29-201ENST00000438595 412 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 534.8 ms