Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 C8orf59P2-201ENST00000603441 271 ntBASIC2.05□□□□□ -2.08
RTL3Q8N8U3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.05□□□□□ -2.08
RTL3Q8N8U3 Y_RNA.804-201ENST00000615262 101 ntBASIC2.05□□□□□ -2.08
RTL3Q8N8U3 AC104985.2-201ENST00000620598 500 ntBASIC2.05□□□□□ -2.08
RTL3Q8N8U3 AL359697.1-201ENST00000624879 587 ntBASIC2.05□□□□□ -2.08
RTL3Q8N8U3 AC099654.5-201ENST00000636479 350 ntBASIC2.05□□□□□ -2.08
RTL3Q8N8U3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
RTL3Q8N8U3 RNU6-593P-201ENST00000364716 112 ntBASIC2.04□□□□□ -2.08
RTL3Q8N8U3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
RTL3Q8N8U3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.04□□□□□ -2.08
RTL3Q8N8U3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
RTL3Q8N8U3 MT-TD-201ENST00000387419 68 ntBASIC2.04□□□□□ -2.08
RTL3Q8N8U3 MIR676-201ENST00000390702 67 ntBASIC2.04□□□□□ -2.08
RTL3Q8N8U3 RNU6-325P-201ENST00000411132 105 ntBASIC2.04□□□□□ -2.08
RTL3Q8N8U3 RNU6-293P-201ENST00000411259 106 ntBASIC2.04□□□□□ -2.08
RTL3Q8N8U3 AP000275.1-201ENST00000411943 390 ntBASIC2.04□□□□□ -2.08
RTL3Q8N8U3 AC074085.1-201ENST00000413598 418 ntBASIC2.04□□□□□ -2.08
RTL3Q8N8U3 AC093019.1-201ENST00000443135 252 ntBASIC2.04□□□□□ -2.08
RTL3Q8N8U3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.04□□□□□ -2.08
RTL3Q8N8U3 AC107399.1-201ENST00000451226 265 ntBASIC2.04□□□□□ -2.08
RTL3Q8N8U3 RPL23AP3-201ENST00000453844 468 ntBASIC2.04□□□□□ -2.08
RTL3Q8N8U3 SNRPGP7-201ENST00000469016 106 ntBASIC2.04□□□□□ -2.08
RTL3Q8N8U3 AK3P2-201ENST00000507976 429 ntBASIC2.04□□□□□ -2.08
RTL3Q8N8U3 MTND3P22-201ENST00000510932 243 ntBASIC2.04□□□□□ -2.08
RTL3Q8N8U3 RNU5F-2P-201ENST00000516066 82 ntBASIC2.04□□□□□ -2.08
RTL3Q8N8U3 RNU1-40P-201ENST00000516816 164 ntBASIC2.04□□□□□ -2.08
RTL3Q8N8U3 RNU1-97P-201ENST00000516872 164 ntBASIC2.04□□□□□ -2.08
RTL3Q8N8U3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.04□□□□□ -2.08
RTL3Q8N8U3 AC002984.1-201ENST00000591692 448 ntBASIC2.04□□□□□ -2.08
RTL3Q8N8U3 AL359314.1-201ENST00000616913 261 ntBASIC2.04□□□□□ -2.08
RTL3Q8N8U3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RTL3Q8N8U3 SNORD32A-201ENST00000364805 84 ntBASIC2.03□□□□□ -2.08
RTL3Q8N8U3 RNU6-1106P-201ENST00000390845 107 ntBASIC2.03□□□□□ -2.08
RTL3Q8N8U3 MIR1262-201ENST00000408276 93 ntBASIC2.03□□□□□ -2.08
RTL3Q8N8U3 RNU4-14P-201ENST00000410858 122 ntBASIC2.03□□□□□ -2.08
RTL3Q8N8U3 RN7SKP284-201ENST00000411002 343 ntBASIC2.03□□□□□ -2.08
RTL3Q8N8U3 HMGN2P19-201ENST00000425149 265 ntBASIC2.03□□□□□ -2.08
RTL3Q8N8U3 RPL23AP95-201ENST00000426806 265 ntBASIC2.03□□□□□ -2.08
RTL3Q8N8U3 MTND2P29-201ENST00000438595 412 ntBASIC2.03□□□□□ -2.08
RTL3Q8N8U3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.03□□□□□ -2.08
RTL3Q8N8U3 DAP3P1-201ENST00000441522 278 ntBASIC2.03□□□□□ -2.08
RTL3Q8N8U3 SNORD5.1-201ENST00000458800 75 ntBASIC2.03□□□□□ -2.08
RTL3Q8N8U3 AC116337.1-201ENST00000509680 687 ntBASIC2.03□□□□□ -2.08
RTL3Q8N8U3 MRPS17P9-201ENST00000511924 393 ntBASIC2.03□□□□□ -2.08
RTL3Q8N8U3 RPL39P5-202ENST00000512505 151 ntBASIC2.03□□□□□ -2.08
RTL3Q8N8U3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.03□□□□□ -2.08
RTL3Q8N8U3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.03□□□□□ -2.08
RTL3Q8N8U3 MIR4299-201ENST00000577899 72 ntBASIC2.03□□□□□ -2.08
RTL3Q8N8U3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.03□□□□□ -2.08
RTL3Q8N8U3 AL109918.3-201ENST00000603072 338 ntBASIC2.03□□□□□ -2.08
RTL3Q8N8U3 AP001836.1-201ENST00000604675 523 ntBASIC2.03□□□□□ -2.08
RTL3Q8N8U3 AC113139.1-201ENST00000605049 239 ntBASIC2.03□□□□□ -2.08
RTL3Q8N8U3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.03□□□□□ -2.08
RTL3Q8N8U3 AC091932.3-201ENST00000624223 323 ntBASIC2.03□□□□□ -2.08
RTL3Q8N8U3 AC112487.2-201ENST00000637950 304 ntBASIC2.03□□□□□ -2.08
RTL3Q8N8U3 Y_RNA.151-201ENST00000363566 112 ntBASIC2.02□□□□□ -2.09
RTL3Q8N8U3 RNU6-1317P-201ENST00000364582 104 ntBASIC2.02□□□□□ -2.09
RTL3Q8N8U3 RNU6-596P-201ENST00000365395 98 ntBASIC2.02□□□□□ -2.09
RTL3Q8N8U3 Y_RNA.482-201ENST00000384377 111 ntBASIC2.02□□□□□ -2.09
RTL3Q8N8U3 SNORA51.11-201ENST00000384442 131 ntBASIC2.02□□□□□ -2.09
RTL3Q8N8U3 RNU6-692P-201ENST00000384496 107 ntBASIC2.02□□□□□ -2.09
RTL3Q8N8U3 Y_RNA.509-201ENST00000384506 99 ntBASIC2.02□□□□□ -2.09
RTL3Q8N8U3 MIR517A-201ENST00000385001 87 ntBASIC2.02□□□□□ -2.09
RTL3Q8N8U3 RNU11-3P-201ENST00000391111 133 ntBASIC2.02□□□□□ -2.09
RTL3Q8N8U3 MIR1294-201ENST00000408503 142 ntBASIC2.02□□□□□ -2.09
RTL3Q8N8U3 RPL37P10-201ENST00000412884 288 ntBASIC2.02□□□□□ -2.09
RTL3Q8N8U3 OOSP1P1-201ENST00000423265 274 ntBASIC2.02□□□□□ -2.09
RTL3Q8N8U3 AL133396.1-201ENST00000432048 687 ntBASIC2.02□□□□□ -2.09
RTL3Q8N8U3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.02□□□□□ -2.09
RTL3Q8N8U3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.02□□□□□ -2.09
RTL3Q8N8U3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.02□□□□□ -2.09
RTL3Q8N8U3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.02□□□□□ -2.09
RTL3Q8N8U3 RPL9P9-202ENST00000466501 579 ntBASIC2.02□□□□□ -2.09
RTL3Q8N8U3 MTND4P17-201ENST00000470444 350 ntBASIC2.02□□□□□ -2.09
RTL3Q8N8U3 AC022447.4-201ENST00000504053 364 ntBASIC2.02□□□□□ -2.09
RTL3Q8N8U3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.02□□□□□ -2.09
RTL3Q8N8U3 AC007375.1-201ENST00000554513 578 ntBASIC2.02□□□□□ -2.09
RTL3Q8N8U3 AC008749.1-201ENST00000597650 306 ntBASIC2.02□□□□□ -2.09
RTL3Q8N8U3 AC078795.3-201ENST00000602913 472 ntBASIC2.02□□□□□ -2.09
RTL3Q8N8U3 AL356157.2-201ENST00000605122 111 ntBASIC2.02□□□□□ -2.09
RTL3Q8N8U3 AL773524.1-201ENST00000614065 229 ntBASIC2.02□□□□□ -2.09
RTL3Q8N8U3 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.02□□□□□ -2.09
RTL3Q8N8U3 AC005296.1-201ENST00000616145 209 ntBASIC2.02□□□□□ -2.09
RTL3Q8N8U3 AC241585.2-209ENST00000638217 143 ntBASIC2.02□□□□□ -2.09
RTL3Q8N8U3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RTL3Q8N8U3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
RTL3Q8N8U3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.01□□□□□ -2.09
RTL3Q8N8U3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
RTL3Q8N8U3 RNU6-1285P-201ENST00000363480 105 ntBASIC2.01□□□□□ -2.09
RTL3Q8N8U3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.01□□□□□ -2.09
RTL3Q8N8U3 BX510359.4-201ENST00000423750 193 ntBASIC2.01□□□□□ -2.09
RTL3Q8N8U3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.01□□□□□ -2.09
RTL3Q8N8U3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.01□□□□□ -2.09
RTL3Q8N8U3 U8.21-201ENST00000459536 136 ntBASIC2.01□□□□□ -2.09
RTL3Q8N8U3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.01□□□□□ -2.09
RTL3Q8N8U3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.01□□□□□ -2.09
RTL3Q8N8U3 AC026782.1-201ENST00000512952 449 ntBASIC2.01□□□□□ -2.09
RTL3Q8N8U3 RNU6-1016P-201ENST00000516689 94 ntBASIC2.01□□□□□ -2.09
RTL3Q8N8U3 RNU6-612P-201ENST00000516909 102 ntBASIC2.01□□□□□ -2.09
RTL3Q8N8U3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms