Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 RNA5SP37-201ENST00000365420 130 ntBASIC2.2□□□□□ -2.06
CPSF7Q8N684 Y_RNA.533-201ENST00000384596 114 ntBASIC2.2□□□□□ -2.06
CPSF7Q8N684 MIR95-201ENST00000385072 81 ntBASIC2.2□□□□□ -2.06
CPSF7Q8N684 MT-TD-201ENST00000387419 68 ntBASIC2.2□□□□□ -2.06
CPSF7Q8N684 Y_RNA.597-201ENST00000410463 100 ntBASIC2.2□□□□□ -2.06
CPSF7Q8N684 RNU6-1304P-201ENST00000411374 106 ntBASIC2.2□□□□□ -2.06
CPSF7Q8N684 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.2□□□□□ -2.06
CPSF7Q8N684 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.2□□□□□ -2.06
CPSF7Q8N684 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.2□□□□□ -2.06
CPSF7Q8N684 RPL23AP75-201ENST00000491601 451 ntBASIC2.2□□□□□ -2.06
CPSF7Q8N684 AF186996.7-201ENST00000492781 209 ntBASIC2.2□□□□□ -2.06
CPSF7Q8N684 MTND3P22-201ENST00000510932 243 ntBASIC2.2□□□□□ -2.06
CPSF7Q8N684 SNORA48.11-201ENST00000517015 89 ntBASIC2.2□□□□□ -2.06
CPSF7Q8N684 RNU6-1213P-201ENST00000517075 94 ntBASIC2.2□□□□□ -2.06
CPSF7Q8N684 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.2□□□□□ -2.06
CPSF7Q8N684 FRG2DP-202ENST00000566967 323 ntBASIC2.2□□□□□ -2.06
CPSF7Q8N684 MIR5690-201ENST00000583739 73 ntBASIC2.2□□□□□ -2.06
CPSF7Q8N684 MIR4658-201ENST00000584344 65 ntBASIC2.2□□□□□ -2.06
CPSF7Q8N684 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.2□□□□□ -2.06
CPSF7Q8N684 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.2□□□□□ -2.06
CPSF7Q8N684 AC046143.2-201ENST00000609789 160 ntBASIC2.2□□□□□ -2.06
CPSF7Q8N684 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.2□□□□□ -2.06
CPSF7Q8N684 AL669831.3-213ENST00000636676 183 ntBASIC2.2□□□□□ -2.06
CPSF7Q8N684 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CPSF7Q8N684 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.2□□□□□ -2.06
CPSF7Q8N684 AC009487.4-201ENST00000624969 3585 ntBASIC2.19□□□□□ -2.06
CPSF7Q8N684 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.19□□□□□ -2.06
CPSF7Q8N684 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CPSF7Q8N684 Y_RNA.48-201ENST00000362710 103 ntBASIC2.19□□□□□ -2.06
CPSF7Q8N684 SNORA38-201ENST00000363946 132 ntBASIC2.19□□□□□ -2.06
CPSF7Q8N684 RNU6-944P-201ENST00000364023 107 ntBASIC2.19□□□□□ -2.06
CPSF7Q8N684 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.19□□□□□ -2.06
CPSF7Q8N684 Y_RNA.404-201ENST00000383978 102 ntBASIC2.19□□□□□ -2.06
CPSF7Q8N684 RNU6-1297P-201ENST00000384415 104 ntBASIC2.19□□□□□ -2.06
CPSF7Q8N684 SNORA46.1-201ENST00000391069 153 ntBASIC2.19□□□□□ -2.06
CPSF7Q8N684 MIR208B-201ENST00000401172 77 ntBASIC2.19□□□□□ -2.06
CPSF7Q8N684 MTCYBP2-201ENST00000407745 171 ntBASIC2.19□□□□□ -2.06
CPSF7Q8N684 RNU2-41P-201ENST00000410991 178 ntBASIC2.19□□□□□ -2.06
CPSF7Q8N684 USMG5P1-201ENST00000425964 177 ntBASIC2.19□□□□□ -2.06
CPSF7Q8N684 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.19□□□□□ -2.06
CPSF7Q8N684 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.19□□□□□ -2.06
CPSF7Q8N684 AC087477.1-201ENST00000465747 340 ntBASIC2.19□□□□□ -2.06
CPSF7Q8N684 MIR514B-201ENST00000516774 80 ntBASIC2.19□□□□□ -2.06
CPSF7Q8N684 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.19□□□□□ -2.06
CPSF7Q8N684 APOOP3-201ENST00000536787 586 ntBASIC2.19□□□□□ -2.06
CPSF7Q8N684 RAB11AP2-201ENST00000545905 639 ntBASIC2.19□□□□□ -2.06
CPSF7Q8N684 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.19□□□□□ -2.06
CPSF7Q8N684 MIR5696-201ENST00000578474 85 ntBASIC2.19□□□□□ -2.06
CPSF7Q8N684 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.19□□□□□ -2.06
CPSF7Q8N684 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.19□□□□□ -2.06
CPSF7Q8N684 AC098657.3-201ENST00000620434 263 ntBASIC2.19□□□□□ -2.06
CPSF7Q8N684 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.19□□□□□ -2.06
CPSF7Q8N684 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CPSF7Q8N684 ZNF299P-201ENST00000406845 1804 ntBASIC2.19□□□□□ -2.06
CPSF7Q8N684 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.19□□□□□ -2.06
CPSF7Q8N684 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
CPSF7Q8N684 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
CPSF7Q8N684 RNU4-73P-201ENST00000363164 141 ntBASIC2.18□□□□□ -2.06
CPSF7Q8N684 RNU1-23P-201ENST00000363361 144 ntBASIC2.18□□□□□ -2.06
CPSF7Q8N684 RNU6-1188P-201ENST00000363795 107 ntBASIC2.18□□□□□ -2.06
CPSF7Q8N684 RNU4-52P-201ENST00000384209 138 ntBASIC2.18□□□□□ -2.06
CPSF7Q8N684 RNU6-378P-201ENST00000384324 107 ntBASIC2.18□□□□□ -2.06
CPSF7Q8N684 RNU6-331P-201ENST00000384724 107 ntBASIC2.18□□□□□ -2.06
CPSF7Q8N684 RNA5SP201-201ENST00000410316 124 ntBASIC2.18□□□□□ -2.06
CPSF7Q8N684 RN7SKP223-201ENST00000410582 62 ntBASIC2.18□□□□□ -2.06
CPSF7Q8N684 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.18□□□□□ -2.06
CPSF7Q8N684 AL358453.1-201ENST00000422522 250 ntBASIC2.18□□□□□ -2.06
CPSF7Q8N684 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.18□□□□□ -2.06
CPSF7Q8N684 snoU13.23-201ENST00000458863 104 ntBASIC2.18□□□□□ -2.06
CPSF7Q8N684 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.18□□□□□ -2.06
CPSF7Q8N684 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.18□□□□□ -2.06
CPSF7Q8N684 RNA5SP281-201ENST00000516504 135 ntBASIC2.18□□□□□ -2.06
CPSF7Q8N684 RNA5SP384-201ENST00000516615 116 ntBASIC2.18□□□□□ -2.06
CPSF7Q8N684 HSPE1P18-201ENST00000517602 280 ntBASIC2.18□□□□□ -2.06
CPSF7Q8N684 CBX3P8-201ENST00000532412 525 ntBASIC2.18□□□□□ -2.06
CPSF7Q8N684 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.18□□□□□ -2.06
CPSF7Q8N684 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.18□□□□□ -2.06
CPSF7Q8N684 AC093027.1-201ENST00000546698 429 ntBASIC2.18□□□□□ -2.06
CPSF7Q8N684 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.18□□□□□ -2.06
CPSF7Q8N684 MIR5002-201ENST00000584713 97 ntBASIC2.18□□□□□ -2.06
CPSF7Q8N684 AC002984.1-201ENST00000591692 448 ntBASIC2.18□□□□□ -2.06
CPSF7Q8N684 7SK.7-201ENST00000603504 247 ntBASIC2.18□□□□□ -2.06
CPSF7Q8N684 PCGEM1.1-201ENST00000613431 131 ntBASIC2.18□□□□□ -2.06
CPSF7Q8N684 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.18□□□□□ -2.06
CPSF7Q8N684 SCARNA4-201ENST00000629045 128 ntBASIC2.18□□□□□ -2.06
CPSF7Q8N684 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.18□□□□□ -2.06
CPSF7Q8N684 MTND4LP32-201ENST00000636111 270 ntBASIC2.18□□□□□ -2.06
CPSF7Q8N684 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CPSF7Q8N684 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
CPSF7Q8N684 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.17□□□□□ -2.06
CPSF7Q8N684 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CPSF7Q8N684 Y_RNA.67-201ENST00000362870 100 ntBASIC2.17□□□□□ -2.06
CPSF7Q8N684 RNU6-1159P-201ENST00000362933 107 ntBASIC2.17□□□□□ -2.06
CPSF7Q8N684 U3.9-201ENST00000363823 204 ntBASIC2.17□□□□□ -2.06
CPSF7Q8N684 Y_RNA.259-201ENST00000364619 101 ntBASIC2.17□□□□□ -2.06
CPSF7Q8N684 RNU4-9P-201ENST00000364951 139 ntBASIC2.17□□□□□ -2.06
CPSF7Q8N684 MIR561-201ENST00000385216 97 ntBASIC2.17□□□□□ -2.06
CPSF7Q8N684 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CPSF7Q8N684 SNORA12-201ENST00000391162 147 ntBASIC2.17□□□□□ -2.06
CPSF7Q8N684 RNU6-1093P-201ENST00000391194 107 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms