Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 MIR2355-201ENST00000517199 87 ntBASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 AC022868.1-201ENST00000517767 391 ntBASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 AC109329.1-201ENST00000518744 317 ntBASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 AL442163.3-201ENST00000554110 156 ntBASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 AC004817.2-201ENST00000561794 651 ntBASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 RPS15AP11-201ENST00000594193 385 ntBASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 AC010620.2-201ENST00000600135 313 ntBASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 RAC1P9-201ENST00000604990 392 ntBASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 RNU6-91P-201ENST00000607774 107 ntBASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 AC093732.2-201ENST00000607950 274 ntBASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 AC096772.1-201ENST00000609146 564 ntBASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 AC002543.1-201ENST00000299783 1954 ntBASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 RNU6-212P-201ENST00000362642 104 ntBASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 RNU1-76P-201ENST00000362903 159 ntBASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 RNU6-1159P-201ENST00000362933 107 ntBASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 RNU6-529P-201ENST00000363383 104 ntBASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 SNORD21-201ENST00000383953 95 ntBASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 RNU6-505P-201ENST00000384427 107 ntBASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 RPL21P1-201ENST00000399532 476 ntBASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 AL590135.1-201ENST00000422215 156 ntBASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 ELOCP20-201ENST00000422460 345 ntBASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 AC019205.3-201ENST00000424573 156 ntBASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 USP9YP16-201ENST00000430287 407 ntBASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 AC016700.2-201ENST00000446011 156 ntBASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 USP9YP23-201ENST00000455085 407 ntBASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 snoU13.6-201ENST00000458785 104 ntBASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 SNORA25.11-201ENST00000515935 105 ntBASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 RNU6-397P-201ENST00000516226 104 ntBASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 RNY3P15-201ENST00000516297 97 ntBASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 AC115990.1-201ENST00000526957 301 ntBASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 AP002770.2-201ENST00000543613 532 ntBASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 AC090517.1-201ENST00000569307 266 ntBASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 MIR4635-201ENST00000583759 79 ntBASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 AC006006.1-201ENST00000603082 144 ntBASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 AC137590.2-201ENST00000619709 240 ntBASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.46□□□□□ -2.02
CLIP4Q8N3C7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CLIP4Q8N3C7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CLIP4Q8N3C7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CLIP4Q8N3C7 SNORD114-19-201ENST00000363072 75 ntBASIC2.45□□□□□ -2.02
CLIP4Q8N3C7 RNU6-702P-201ENST00000364982 107 ntBASIC2.45□□□□□ -2.02
CLIP4Q8N3C7 Y_RNA.401-201ENST00000383965 117 ntBASIC2.45□□□□□ -2.02
CLIP4Q8N3C7 MIR487A-201ENST00000385009 80 ntBASIC2.45□□□□□ -2.02
CLIP4Q8N3C7 RNA5SP210-201ENST00000391034 120 ntBASIC2.45□□□□□ -2.02
CLIP4Q8N3C7 RNA5SP21-201ENST00000410917 96 ntBASIC2.45□□□□□ -2.02
CLIP4Q8N3C7 Z92545.1-201ENST00000411782 234 ntBASIC2.45□□□□□ -2.02
CLIP4Q8N3C7 AC012306.1-201ENST00000423267 114 ntBASIC2.45□□□□□ -2.02
CLIP4Q8N3C7 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.45□□□□□ -2.02
CLIP4Q8N3C7 FCF1P4-201ENST00000448326 183 ntBASIC2.45□□□□□ -2.02
CLIP4Q8N3C7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.45□□□□□ -2.02
CLIP4Q8N3C7 AP001324.2-201ENST00000461163 319 ntBASIC2.45□□□□□ -2.02
CLIP4Q8N3C7 AC073901.1-201ENST00000462471 408 ntBASIC2.45□□□□□ -2.02
CLIP4Q8N3C7 AP000870.1-201ENST00000472927 406 ntBASIC2.45□□□□□ -2.02
CLIP4Q8N3C7 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.45□□□□□ -2.02
CLIP4Q8N3C7 AC010469.2-201ENST00000496412 480 ntBASIC2.45□□□□□ -2.02
CLIP4Q8N3C7 SNORA31.16-201ENST00000516773 139 ntBASIC2.45□□□□□ -2.02
CLIP4Q8N3C7 SNORA40.15-201ENST00000516884 107 ntBASIC2.45□□□□□ -2.02
CLIP4Q8N3C7 RNU6-897P-201ENST00000517135 105 ntBASIC2.45□□□□□ -2.02
CLIP4Q8N3C7 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.45□□□□□ -2.02
CLIP4Q8N3C7 AC034114.1-201ENST00000520293 285 ntBASIC2.45□□□□□ -2.02
CLIP4Q8N3C7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.45□□□□□ -2.02
CLIP4Q8N3C7 AL078605.1-201ENST00000603529 500 ntBASIC2.45□□□□□ -2.02
CLIP4Q8N3C7 AL137843.1-201ENST00000605078 385 ntBASIC2.45□□□□□ -2.02
CLIP4Q8N3C7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
CLIP4Q8N3C7 RNU6-770P-201ENST00000363929 105 ntBASIC2.44□□□□□ -2.02
CLIP4Q8N3C7 Y_RNA.222-201ENST00000364264 102 ntBASIC2.44□□□□□ -2.02
CLIP4Q8N3C7 Y_RNA.458-201ENST00000384240 102 ntBASIC2.44□□□□□ -2.02
CLIP4Q8N3C7 U8.10-201ENST00000384260 133 ntBASIC2.44□□□□□ -2.02
CLIP4Q8N3C7 RNY3P4-201ENST00000384428 101 ntBASIC2.44□□□□□ -2.02
CLIP4Q8N3C7 MIR128-1-201ENST00000384921 82 ntBASIC2.44□□□□□ -2.02
CLIP4Q8N3C7 SNORA48.2-201ENST00000390926 124 ntBASIC2.44□□□□□ -2.02
CLIP4Q8N3C7 SNORA26.3-201ENST00000391119 136 ntBASIC2.44□□□□□ -2.02
CLIP4Q8N3C7 WARS2P1-201ENST00000429678 537 ntBASIC2.44□□□□□ -2.02
CLIP4Q8N3C7 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.44□□□□□ -2.02
CLIP4Q8N3C7 RPEP5-201ENST00000441137 268 ntBASIC2.44□□□□□ -2.02
CLIP4Q8N3C7 SEM1P1-201ENST00000506694 209 ntBASIC2.44□□□□□ -2.02
CLIP4Q8N3C7 RNU5F-2P-201ENST00000516066 82 ntBASIC2.44□□□□□ -2.02
CLIP4Q8N3C7 SCARNA11.3-201ENST00000517276 130 ntBASIC2.44□□□□□ -2.02
CLIP4Q8N3C7 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CLIP4Q8N3C7 MYL12BP1-201ENST00000569826 507 ntBASIC2.44□□□□□ -2.02
CLIP4Q8N3C7 AC005000.2-201ENST00000605468 310 ntBASIC2.44□□□□□ -2.02
CLIP4Q8N3C7 AL121655.1-201ENST00000605811 308 ntBASIC2.44□□□□□ -2.02
CLIP4Q8N3C7 AL137790.1-201ENST00000634283 177 ntBASIC2.44□□□□□ -2.02
CLIP4Q8N3C7 U6.92-201ENST00000636464 89 ntBASIC2.44□□□□□ -2.02
CLIP4Q8N3C7 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.44□□□□□ -2.02
CLIP4Q8N3C7 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms