Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 RNU6-968P-201ENST00000384076 107 ntBASIC2.05□□□□□ -2.08
CCDC60Q8IWA6 MIR17-201ENST00000385012 84 ntBASIC2.05□□□□□ -2.08
CCDC60Q8IWA6 MT-TL1-201ENST00000386347 75 ntBASIC2.05□□□□□ -2.08
CCDC60Q8IWA6 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC60Q8IWA6 MIR208B-201ENST00000401172 77 ntBASIC2.05□□□□□ -2.08
CCDC60Q8IWA6 MTND3P8-201ENST00000412909 339 ntBASIC2.05□□□□□ -2.08
CCDC60Q8IWA6 AL139396.1-201ENST00000421137 167 ntBASIC2.05□□□□□ -2.08
CCDC60Q8IWA6 AC055731.1-201ENST00000474387 401 ntBASIC2.05□□□□□ -2.08
CCDC60Q8IWA6 RPS27P21-201ENST00000486977 252 ntBASIC2.05□□□□□ -2.08
CCDC60Q8IWA6 MIR449C-201ENST00000516047 92 ntBASIC2.05□□□□□ -2.08
CCDC60Q8IWA6 RNU6-567P-201ENST00000516746 107 ntBASIC2.05□□□□□ -2.08
CCDC60Q8IWA6 SNORA31.25-201ENST00000517242 134 ntBASIC2.05□□□□□ -2.08
CCDC60Q8IWA6 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC60Q8IWA6 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC60Q8IWA6 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC60Q8IWA6 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.05□□□□□ -2.08
CCDC60Q8IWA6 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC60Q8IWA6 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC60Q8IWA6 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC60Q8IWA6 AC124303.1-201ENST00000605703 360 ntBASIC2.05□□□□□ -2.08
CCDC60Q8IWA6 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.05□□□□□ -2.08
CCDC60Q8IWA6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC60Q8IWA6 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
CCDC60Q8IWA6 RNU6-767P-201ENST00000384132 107 ntBASIC2.04□□□□□ -2.08
CCDC60Q8IWA6 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CCDC60Q8IWA6 MIR1294-201ENST00000408503 142 ntBASIC2.04□□□□□ -2.08
CCDC60Q8IWA6 EDDM3CP-201ENST00000415977 425 ntBASIC2.04□□□□□ -2.08
CCDC60Q8IWA6 AC012306.1-201ENST00000423267 114 ntBASIC2.04□□□□□ -2.08
CCDC60Q8IWA6 RBMX2P4-201ENST00000441256 376 ntBASIC2.04□□□□□ -2.08
CCDC60Q8IWA6 AC107032.1-201ENST00000485945 480 ntBASIC2.04□□□□□ -2.08
CCDC60Q8IWA6 ACA59.1-201ENST00000515966 143 ntBASIC2.04□□□□□ -2.08
CCDC60Q8IWA6 AC034114.1-201ENST00000520293 285 ntBASIC2.04□□□□□ -2.08
CCDC60Q8IWA6 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC60Q8IWA6 AC022616.8-201ENST00000533569 253 ntBASIC2.04□□□□□ -2.08
CCDC60Q8IWA6 AC109446.1-201ENST00000566172 220 ntBASIC2.04□□□□□ -2.08
CCDC60Q8IWA6 CYP4A27P-201ENST00000567218 190 ntBASIC2.04□□□□□ -2.08
CCDC60Q8IWA6 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC60Q8IWA6 MIR6128-201ENST00000615528 109 ntBASIC2.04□□□□□ -2.08
CCDC60Q8IWA6 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.04□□□□□ -2.08
CCDC60Q8IWA6 AC084768.2-201ENST00000622736 221 ntBASIC2.04□□□□□ -2.08
CCDC60Q8IWA6 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC60Q8IWA6 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
CCDC60Q8IWA6 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CCDC60Q8IWA6 RNU6-1286P-201ENST00000383871 107 ntBASIC2.03□□□□□ -2.08
CCDC60Q8IWA6 SNORA29-201ENST00000384183 140 ntBASIC2.03□□□□□ -2.08
CCDC60Q8IWA6 RNU6-378P-201ENST00000384324 107 ntBASIC2.03□□□□□ -2.08
CCDC60Q8IWA6 MIR548F5-201ENST00000408421 86 ntBASIC2.03□□□□□ -2.08
CCDC60Q8IWA6 RNA5SP494-201ENST00000410653 129 ntBASIC2.03□□□□□ -2.08
CCDC60Q8IWA6 MTCO3P46-201ENST00000425787 232 ntBASIC2.03□□□□□ -2.08
CCDC60Q8IWA6 DAP3P1-201ENST00000441522 278 ntBASIC2.03□□□□□ -2.08
CCDC60Q8IWA6 MTND1P17-201ENST00000448961 204 ntBASIC2.03□□□□□ -2.08
CCDC60Q8IWA6 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.03□□□□□ -2.08
CCDC60Q8IWA6 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC60Q8IWA6 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC60Q8IWA6 PRDX4P1-201ENST00000507189 574 ntBASIC2.03□□□□□ -2.08
CCDC60Q8IWA6 RNA5SP364-201ENST00000516938 78 ntBASIC2.03□□□□□ -2.08
CCDC60Q8IWA6 RNU1-54P-201ENST00000517181 120 ntBASIC2.03□□□□□ -2.08
CCDC60Q8IWA6 RNU2-19P-201ENST00000517288 84 ntBASIC2.03□□□□□ -2.08
CCDC60Q8IWA6 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.03□□□□□ -2.08
CCDC60Q8IWA6 AC005668.1-201ENST00000571142 476 ntBASIC2.03□□□□□ -2.08
CCDC60Q8IWA6 MIR4529-201ENST00000578110 78 ntBASIC2.03□□□□□ -2.08
CCDC60Q8IWA6 AL022345.1-201ENST00000607292 135 ntBASIC2.03□□□□□ -2.08
CCDC60Q8IWA6 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.03□□□□□ -2.08
CCDC60Q8IWA6 AC233981.2-201ENST00000611524 1614 ntBASIC2.02□□□□□ -2.09
CCDC60Q8IWA6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CCDC60Q8IWA6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CCDC60Q8IWA6 U3.9-201ENST00000363823 204 ntBASIC2.02□□□□□ -2.09
CCDC60Q8IWA6 RNU6-1093P-201ENST00000391194 107 ntBASIC2.02□□□□□ -2.09
CCDC60Q8IWA6 MTCYBP2-201ENST00000407745 171 ntBASIC2.02□□□□□ -2.09
CCDC60Q8IWA6 RNA5SP201-201ENST00000410316 124 ntBASIC2.02□□□□□ -2.09
CCDC60Q8IWA6 CBX3P6-201ENST00000430257 527 ntBASIC2.02□□□□□ -2.09
CCDC60Q8IWA6 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC60Q8IWA6 AC107393.1-201ENST00000512403 346 ntBASIC2.02□□□□□ -2.09
CCDC60Q8IWA6 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.02□□□□□ -2.09
CCDC60Q8IWA6 RNU7-30P-201ENST00000516835 62 ntBASIC2.02□□□□□ -2.09
CCDC60Q8IWA6 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC60Q8IWA6 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC60Q8IWA6 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC60Q8IWA6 AC018630.3-201ENST00000542637 96 ntBASIC2.02□□□□□ -2.09
CCDC60Q8IWA6 MIR4287-201ENST00000579398 78 ntBASIC2.02□□□□□ -2.09
CCDC60Q8IWA6 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC60Q8IWA6 FGF7P1-201ENST00000582820 288 ntBASIC2.02□□□□□ -2.09
CCDC60Q8IWA6 AC078899.2-201ENST00000595282 212 ntBASIC2.02□□□□□ -2.09
CCDC60Q8IWA6 PCGEM1.1-201ENST00000613431 131 ntBASIC2.02□□□□□ -2.09
CCDC60Q8IWA6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
CCDC60Q8IWA6 AC009487.4-201ENST00000624969 3585 ntBASIC2.02□□□□□ -2.09
CCDC60Q8IWA6 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 SNORD115-3-201ENST00000363100 82 ntBASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 SNORD32B-201ENST00000364460 84 ntBASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 Y_RNA.279-201ENST00000364763 95 ntBASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 RNU6-1283P-201ENST00000365314 105 ntBASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 Y_RNA.390-201ENST00000383932 102 ntBASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 RNU6-784P-201ENST00000384330 106 ntBASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 RNA5SP213-201ENST00000391031 106 ntBASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 RNU6-482P-201ENST00000391068 107 ntBASIC2.01□□□□□ -2.09
CCDC60Q8IWA6 FGF7P8-201ENST00000402994 292 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms