Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 RNU6-261P-201ENST00000459506 102 ntBASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 RNU6-1037P-201ENST00000459571 107 ntBASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 SRRM1P2-201ENST00000464531 1192 ntBASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 RPL9P9-202ENST00000466501 579 ntBASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 RPS23P5-201ENST00000495419 428 ntBASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 Y_RNA.688-201ENST00000516565 95 ntBASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 AC104383.1-201ENST00000530297 370 ntBASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 MRPS36P4-201ENST00000534436 298 ntBASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 MIR5692C1-201ENST00000585309 91 ntBASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 CTHRC1P1-201ENST00000605383 469 ntBASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 AC116312.1-201ENST00000606841 314 ntBASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 AP001330.5-201ENST00000607176 411 ntBASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 AC017083.3-201ENST00000609955 700 ntBASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 AL161722.3-201ENST00000605789 2983 ntBASIC1.44□□□□□ -2.18
CCDC50Q8IVM0 RNU6-227P-201ENST00000362865 103 ntBASIC1.44□□□□□ -2.18
CCDC50Q8IVM0 RNU6-1329P-201ENST00000365664 107 ntBASIC1.44□□□□□ -2.18
CCDC50Q8IVM0 RNU6-877P-201ENST00000383868 107 ntBASIC1.44□□□□□ -2.18
CCDC50Q8IVM0 RNU6-418P-201ENST00000384035 107 ntBASIC1.44□□□□□ -2.18
CCDC50Q8IVM0 SNORA29-201ENST00000384183 140 ntBASIC1.44□□□□□ -2.18
CCDC50Q8IVM0 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.44□□□□□ -2.18
CCDC50Q8IVM0 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.44□□□□□ -2.18
CCDC50Q8IVM0 TIMM9P3-201ENST00000428659 274 ntBASIC1.44□□□□□ -2.18
CCDC50Q8IVM0 USP9YP28-201ENST00000435142 589 ntBASIC1.44□□□□□ -2.18
CCDC50Q8IVM0 RPL31P3-201ENST00000458430 332 ntBASIC1.44□□□□□ -2.18
CCDC50Q8IVM0 snoU13.30-201ENST00000458951 104 ntBASIC1.44□□□□□ -2.18
CCDC50Q8IVM0 RNU6-567P-201ENST00000516746 107 ntBASIC1.44□□□□□ -2.18
CCDC50Q8IVM0 SNORA44.1-201ENST00000517031 108 ntBASIC1.44□□□□□ -2.18
CCDC50Q8IVM0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
CCDC50Q8IVM0 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC50Q8IVM0 AC064807.4-201ENST00000607201 407 ntBASIC1.44□□□□□ -2.18
CCDC50Q8IVM0 RMST_3.1-201ENST00000611651 109 ntBASIC1.44□□□□□ -2.18
CCDC50Q8IVM0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.44□□□□□ -2.18
CCDC50Q8IVM0 MIR7843-201ENST00000622274 79 ntBASIC1.44□□□□□ -2.18
CCDC50Q8IVM0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CCDC50Q8IVM0 RNU6-661P-201ENST00000362409 107 ntBASIC1.43□□□□□ -2.18
CCDC50Q8IVM0 Y_RNA.167-201ENST00000363735 109 ntBASIC1.43□□□□□ -2.18
CCDC50Q8IVM0 RNU6-1026P-201ENST00000384465 108 ntBASIC1.43□□□□□ -2.18
CCDC50Q8IVM0 RNY3P9-201ENST00000384727 106 ntBASIC1.43□□□□□ -2.18
CCDC50Q8IVM0 RNU6-1106P-201ENST00000390845 107 ntBASIC1.43□□□□□ -2.18
CCDC50Q8IVM0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.43□□□□□ -2.18
CCDC50Q8IVM0 USP9YP14-201ENST00000430663 563 ntBASIC1.43□□□□□ -2.18
CCDC50Q8IVM0 AC245047.4-201ENST00000433189 144 ntBASIC1.43□□□□□ -2.18
CCDC50Q8IVM0 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.43□□□□□ -2.18
CCDC50Q8IVM0 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.43□□□□□ -2.18
CCDC50Q8IVM0 AC114801.2-201ENST00000503825 781 ntBASIC1.43□□□□□ -2.18
CCDC50Q8IVM0 AC092436.3-201ENST00000511788 257 ntBASIC1.43□□□□□ -2.18
CCDC50Q8IVM0 RN7SKP179-201ENST00000516126 217 ntBASIC1.43□□□□□ -2.18
CCDC50Q8IVM0 RNU6-1041P-201ENST00000516254 102 ntBASIC1.43□□□□□ -2.18
CCDC50Q8IVM0 SUMO2P18-201ENST00000518873 252 ntBASIC1.43□□□□□ -2.18
CCDC50Q8IVM0 AC087854.1-201ENST00000519706 414 ntBASIC1.43□□□□□ -2.18
CCDC50Q8IVM0 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.43□□□□□ -2.18
CCDC50Q8IVM0 AC016727.2-201ENST00000603988 621 ntBASIC1.43□□□□□ -2.18
CCDC50Q8IVM0 AC092807.2-201ENST00000609367 243 ntBASIC1.43□□□□□ -2.18
CCDC50Q8IVM0 MIR8074-201ENST00000615081 81 ntBASIC1.43□□□□□ -2.18
CCDC50Q8IVM0 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.43□□□□□ -2.18
CCDC50Q8IVM0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.43□□□□□ -2.18
CCDC50Q8IVM0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CCDC50Q8IVM0 MTND5P26-201ENST00000426018 1752 ntBASIC1.42□□□□□ -2.18
CCDC50Q8IVM0 Y_RNA.123-201ENST00000363338 102 ntBASIC1.42□□□□□ -2.18
CCDC50Q8IVM0 RNU6-203P-201ENST00000384038 104 ntBASIC1.42□□□□□ -2.18
CCDC50Q8IVM0 MIR548B-201ENST00000385247 97 ntBASIC1.42□□□□□ -2.18
CCDC50Q8IVM0 MIR758-201ENST00000390227 88 ntBASIC1.42□□□□□ -2.18
CCDC50Q8IVM0 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.42□□□□□ -2.18
CCDC50Q8IVM0 MTND3P16-201ENST00000452205 344 ntBASIC1.42□□□□□ -2.18
CCDC50Q8IVM0 AC087477.1-201ENST00000465747 340 ntBASIC1.42□□□□□ -2.18
CCDC50Q8IVM0 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.42□□□□□ -2.18
CCDC50Q8IVM0 AC083798.1-201ENST00000472671 131 ntBASIC1.42□□□□□ -2.18
CCDC50Q8IVM0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.42□□□□□ -2.18
CCDC50Q8IVM0 SNORD60.2-201ENST00000516883 86 ntBASIC1.42□□□□□ -2.18
CCDC50Q8IVM0 RNU6-835P-201ENST00000516974 104 ntBASIC1.42□□□□□ -2.18
CCDC50Q8IVM0 RNU1-92P-201ENST00000517017 135 ntBASIC1.42□□□□□ -2.18
CCDC50Q8IVM0 RNA5SP437-201ENST00000517249 129 ntBASIC1.42□□□□□ -2.18
CCDC50Q8IVM0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.42□□□□□ -2.18
CCDC50Q8IVM0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.42□□□□□ -2.18
CCDC50Q8IVM0 FER-210ENST00000628534 558 ntTSL 5 BASIC1.42□□□□□ -2.18
CCDC50Q8IVM0 MIR6863-201ENST00000636112 90 ntBASIC1.42□□□□□ -2.18
CCDC50Q8IVM0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.42□□□□□ -2.18
CCDC50Q8IVM0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CCDC50Q8IVM0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CCDC50Q8IVM0 RNU6-82P-201ENST00000363970 107 ntBASIC1.41□□□□□ -2.18
CCDC50Q8IVM0 RNU6-457P-201ENST00000363999 107 ntBASIC1.41□□□□□ -2.18
CCDC50Q8IVM0 SNORD116-9-201ENST00000384000 95 ntBASIC1.41□□□□□ -2.18
CCDC50Q8IVM0 SNORD116-3-201ENST00000384287 95 ntBASIC1.41□□□□□ -2.18
CCDC50Q8IVM0 SNORD116-7-201ENST00000384404 95 ntBASIC1.41□□□□□ -2.18
CCDC50Q8IVM0 SNORD116-5-201ENST00000384462 95 ntBASIC1.41□□□□□ -2.18
CCDC50Q8IVM0 SNORA67.5-201ENST00000391036 107 ntBASIC1.41□□□□□ -2.18
CCDC50Q8IVM0 CALM2P3-201ENST00000400429 449 ntBASIC1.41□□□□□ -2.18
CCDC50Q8IVM0 AC004866.1-201ENST00000411748 78 ntBASIC1.41□□□□□ -2.18
CCDC50Q8IVM0 AC060773.1-201ENST00000421698 310 ntBASIC1.41□□□□□ -2.18
CCDC50Q8IVM0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC50Q8IVM0 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.41□□□□□ -2.18
CCDC50Q8IVM0 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC50Q8IVM0 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC50Q8IVM0 AC007395.1-201ENST00000451333 677 ntBASIC1.41□□□□□ -2.18
CCDC50Q8IVM0 ATP5J2P3-201ENST00000451550 258 ntBASIC1.41□□□□□ -2.18
CCDC50Q8IVM0 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms