Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 MIR3646-201ENST00000578301 84 ntBASIC4.32□□□□□ -1.72
RNF135Q8IUD6 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF135Q8IUD6 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RNF135Q8IUD6 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RNF135Q8IUD6 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
RNF135Q8IUD6 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.31□□□□□ -1.72
RNF135Q8IUD6 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.31□□□□□ -1.72
RNF135Q8IUD6 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
RNF135Q8IUD6 Y_RNA.24-201ENST00000362508 103 ntBASIC4.31□□□□□ -1.72
RNF135Q8IUD6 Y_RNA.310-201ENST00000365063 113 ntBASIC4.31□□□□□ -1.72
RNF135Q8IUD6 MIR30B-201ENST00000384850 88 ntBASIC4.31□□□□□ -1.72
RNF135Q8IUD6 MIR183-201ENST00000384958 110 ntBASIC4.31□□□□□ -1.72
RNF135Q8IUD6 MIR616-201ENST00000385293 97 ntBASIC4.31□□□□□ -1.72
RNF135Q8IUD6 HLA-N-201ENST00000437516 135 ntBASIC4.31□□□□□ -1.72
RNF135Q8IUD6 AL121914.1-201ENST00000450188 156 ntBASIC4.31□□□□□ -1.72
RNF135Q8IUD6 RPS29P19-201ENST00000479709 171 ntBASIC4.31□□□□□ -1.72
RNF135Q8IUD6 SRIP1-201ENST00000489235 288 ntBASIC4.31□□□□□ -1.72
RNF135Q8IUD6 AC006064.5-201ENST00000541782 248 ntBASIC4.31□□□□□ -1.72
RNF135Q8IUD6 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF135Q8IUD6 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF135Q8IUD6 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF135Q8IUD6 MIR5582-201ENST00000579697 68 ntBASIC4.31□□□□□ -1.72
RNF135Q8IUD6 MIR6844-201ENST00000637122 62 ntBASIC4.31□□□□□ -1.72
RNF135Q8IUD6 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF135Q8IUD6 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF135Q8IUD6 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF135Q8IUD6 ZNF702P-202ENST00000434269 1966 ntBASIC4.31□□□□□ -1.72
RNF135Q8IUD6 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF135Q8IUD6 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF135Q8IUD6 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF135Q8IUD6 OTUD4P1-201ENST00000237841 3067 ntBASIC4.3□□□□□ -1.72
RNF135Q8IUD6 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF135Q8IUD6 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.3□□□□□ -1.72
RNF135Q8IUD6 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RNF135Q8IUD6 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
RNF135Q8IUD6 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF135Q8IUD6 snoU2_19.1-201ENST00000362361 80 ntBASIC4.3□□□□□ -1.72
RNF135Q8IUD6 RNY1P11-201ENST00000363759 113 ntBASIC4.3□□□□□ -1.72
RNF135Q8IUD6 MIR526A2-201ENST00000390198 65 ntBASIC4.3□□□□□ -1.72
RNF135Q8IUD6 AC063976.4-201ENST00000421971 163 ntBASIC4.3□□□□□ -1.72
RNF135Q8IUD6 AL031183.1-201ENST00000457667 207 ntBASIC4.3□□□□□ -1.72
RNF135Q8IUD6 Y_RNA.694-201ENST00000516677 117 ntBASIC4.3□□□□□ -1.72
RNF135Q8IUD6 RNU1-30P-201ENST00000606575 163 ntBASIC4.3□□□□□ -1.72
RNF135Q8IUD6 uc_338.32-201ENST00000615087 172 ntBASIC4.3□□□□□ -1.72
RNF135Q8IUD6 MIR3914-2-201ENST00000637339 95 ntBASIC4.3□□□□□ -1.72
RNF135Q8IUD6 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
RNF135Q8IUD6 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF135Q8IUD6 AC011266.1-201ENST00000624119 3569 ntBASIC4.29□□□□□ -1.72
RNF135Q8IUD6 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF135Q8IUD6 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF135Q8IUD6 AC000403.1-201ENST00000613696 3585 ntBASIC4.29□□□□□ -1.72
RNF135Q8IUD6 RNU6-915P-201ENST00000364943 103 ntBASIC4.29□□□□□ -1.72
RNF135Q8IUD6 RNU6-969P-201ENST00000383900 105 ntBASIC4.29□□□□□ -1.72
RNF135Q8IUD6 RNU6-768P-201ENST00000384683 107 ntBASIC4.29□□□□□ -1.72
RNF135Q8IUD6 MIR15B-201ENST00000385045 98 ntBASIC4.29□□□□□ -1.72
RNF135Q8IUD6 MIR548B-201ENST00000385247 97 ntBASIC4.29□□□□□ -1.72
RNF135Q8IUD6 MIR767-201ENST00000390228 109 ntBASIC4.29□□□□□ -1.72
RNF135Q8IUD6 AL139281.1-201ENST00000422120 335 ntBASIC4.29□□□□□ -1.72
RNF135Q8IUD6 ABCF2P2-201ENST00000450549 296 ntBASIC4.29□□□□□ -1.72
RNF135Q8IUD6 AC245047.8-201ENST00000456455 284 ntBASIC4.29□□□□□ -1.72
RNF135Q8IUD6 RNU7-141P-201ENST00000459304 62 ntBASIC4.29□□□□□ -1.72
RNF135Q8IUD6 RPL23AP62-201ENST00000463396 453 ntBASIC4.29□□□□□ -1.72
RNF135Q8IUD6 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.29□□□□□ -1.72
RNF135Q8IUD6 AC022655.2-201ENST00000577280 318 ntBASIC4.29□□□□□ -1.72
RNF135Q8IUD6 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.29□□□□□ -1.72
RNF135Q8IUD6 AC005000.2-201ENST00000605468 310 ntBASIC4.29□□□□□ -1.72
RNF135Q8IUD6 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.29□□□□□ -1.72
RNF135Q8IUD6 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.29□□□□□ -1.72
RNF135Q8IUD6 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.29□□□□□ -1.72
RNF135Q8IUD6 AL773545.4-201ENST00000637262 310 ntBASIC4.29□□□□□ -1.72
RNF135Q8IUD6 U6.105-201ENST00000637379 88 ntBASIC4.29□□□□□ -1.72
RNF135Q8IUD6 AL513478.4-201ENST00000641636 310 ntBASIC4.29□□□□□ -1.72
RNF135Q8IUD6 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.29□□□□□ -1.72
RNF135Q8IUD6 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.29□□□□□ -1.72
RNF135Q8IUD6 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
RNF135Q8IUD6 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RNF135Q8IUD6 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
RNF135Q8IUD6 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
RNF135Q8IUD6 RNU6-1205P-201ENST00000363625 106 ntBASIC4.28□□□□□ -1.72
RNF135Q8IUD6 SNORA25.7-201ENST00000364375 127 ntBASIC4.28□□□□□ -1.72
RNF135Q8IUD6 U8.11-201ENST00000384699 133 ntBASIC4.28□□□□□ -1.72
RNF135Q8IUD6 SNORA12-201ENST00000391162 147 ntBASIC4.28□□□□□ -1.72
RNF135Q8IUD6 U8.18-201ENST00000459285 133 ntBASIC4.28□□□□□ -1.72
RNF135Q8IUD6 SNRPGP3-201ENST00000469405 227 ntBASIC4.28□□□□□ -1.72
RNF135Q8IUD6 SNORA70.12-201ENST00000516084 153 ntBASIC4.28□□□□□ -1.72
RNF135Q8IUD6 SNORA31.21-201ENST00000517180 77 ntBASIC4.28□□□□□ -1.72
RNF135Q8IUD6 CYP4A43P-201ENST00000568156 121 ntBASIC4.28□□□□□ -1.72
RNF135Q8IUD6 AC099778.2-201ENST00000610904 211 ntBASIC4.28□□□□□ -1.72
RNF135Q8IUD6 AL391903.3-201ENST00000612158 163 ntBASIC4.28□□□□□ -1.72
RNF135Q8IUD6 MIR7151-201ENST00000617477 60 ntBASIC4.28□□□□□ -1.72
RNF135Q8IUD6 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RNF135Q8IUD6 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RNF135Q8IUD6 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
RNF135Q8IUD6 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
RNF135Q8IUD6 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
RNF135Q8IUD6 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF135Q8IUD6 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
RNF135Q8IUD6 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.27□□□□□ -1.73
RNF135Q8IUD6 RNU6-235P-201ENST00000362644 107 ntBASIC4.27□□□□□ -1.73
RNF135Q8IUD6 Y_RNA.251-201ENST00000364551 99 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms