Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.45□□□□□ -1.86
ATG4DQ86TL0 AL121772.2-201ENST00000614331 297 ntBASIC3.45□□□□□ -1.86
ATG4DQ86TL0 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ATG4DQ86TL0 AC018692.3-201ENST00000623929 123 ntBASIC3.45□□□□□ -1.86
ATG4DQ86TL0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.45□□□□□ -1.86
ATG4DQ86TL0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ATG4DQ86TL0 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
ATG4DQ86TL0 AC138915.1-201ENST00000565427 1685 ntBASIC3.45□□□□□ -1.86
ATG4DQ86TL0 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
ATG4DQ86TL0 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATG4DQ86TL0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
ATG4DQ86TL0 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATG4DQ86TL0 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATG4DQ86TL0 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.44□□□□□ -1.86
ATG4DQ86TL0 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATG4DQ86TL0 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ATG4DQ86TL0 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATG4DQ86TL0 RNU1-18P-201ENST00000363062 164 ntBASIC3.44□□□□□ -1.86
ATG4DQ86TL0 SNORA62.3-201ENST00000365110 153 ntBASIC3.44□□□□□ -1.86
ATG4DQ86TL0 RNU6-622P-201ENST00000384272 103 ntBASIC3.44□□□□□ -1.86
ATG4DQ86TL0 MIR670-201ENST00000390142 98 ntBASIC3.44□□□□□ -1.86
ATG4DQ86TL0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
ATG4DQ86TL0 RNA5SP504-201ENST00000410676 117 ntBASIC3.44□□□□□ -1.86
ATG4DQ86TL0 AC099548.1-201ENST00000421443 426 ntBASIC3.44□□□□□ -1.86
ATG4DQ86TL0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.44□□□□□ -1.86
ATG4DQ86TL0 HSPE1P21-201ENST00000438283 308 ntBASIC3.44□□□□□ -1.86
ATG4DQ86TL0 AC004386.2-201ENST00000441858 148 ntBASIC3.44□□□□□ -1.86
ATG4DQ86TL0 SNRPGP8-201ENST00000454064 226 ntBASIC3.44□□□□□ -1.86
ATG4DQ86TL0 RPS4XP2-201ENST00000458402 793 ntBASIC3.44□□□□□ -1.86
ATG4DQ86TL0 RPS29P20-201ENST00000489592 171 ntBASIC3.44□□□□□ -1.86
ATG4DQ86TL0 RN7SL323P-201ENST00000494712 295 ntBASIC3.44□□□□□ -1.86
ATG4DQ86TL0 RN7SKP209-201ENST00000516888 304 ntBASIC3.44□□□□□ -1.86
ATG4DQ86TL0 RNU2-60P-201ENST00000517290 128 ntBASIC3.44□□□□□ -1.86
ATG4DQ86TL0 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.44□□□□□ -1.86
ATG4DQ86TL0 AC093331.1-201ENST00000521474 169 ntBASIC3.44□□□□□ -1.86
ATG4DQ86TL0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.44□□□□□ -1.86
ATG4DQ86TL0 MIR378D2-201ENST00000580636 98 ntBASIC3.44□□□□□ -1.86
ATG4DQ86TL0 SNORA62.6-201ENST00000606322 83 ntBASIC3.44□□□□□ -1.86
ATG4DQ86TL0 AC004832.5-201ENST00000608677 401 ntBASIC3.44□□□□□ -1.86
ATG4DQ86TL0 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.44□□□□□ -1.86
ATG4DQ86TL0 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATG4DQ86TL0 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.44□□□□□ -1.86
ATG4DQ86TL0 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
ATG4DQ86TL0 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATG4DQ86TL0 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.44□□□□□ -1.86
ATG4DQ86TL0 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.43□□□□□ -1.86
ATG4DQ86TL0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.43□□□□□ -1.86
ATG4DQ86TL0 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
ATG4DQ86TL0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ATG4DQ86TL0 RNU6-508P-201ENST00000363231 103 ntBASIC3.43□□□□□ -1.86
ATG4DQ86TL0 Y_RNA.388-201ENST00000383919 113 ntBASIC3.43□□□□□ -1.86
ATG4DQ86TL0 RNU6-144P-201ENST00000383951 107 ntBASIC3.43□□□□□ -1.86
ATG4DQ86TL0 MIR493-201ENST00000385254 89 ntBASIC3.43□□□□□ -1.86
ATG4DQ86TL0 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
ATG4DQ86TL0 RNA5SP171-201ENST00000391071 115 ntBASIC3.43□□□□□ -1.86
ATG4DQ86TL0 RNU6-1197P-201ENST00000391183 107 ntBASIC3.43□□□□□ -1.86
ATG4DQ86TL0 SNORA3.3-201ENST00000408712 125 ntBASIC3.43□□□□□ -1.86
ATG4DQ86TL0 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.43□□□□□ -1.86
ATG4DQ86TL0 RNU6-781P-201ENST00000516377 101 ntBASIC3.43□□□□□ -1.86
ATG4DQ86TL0 SCARNA14-201ENST00000516903 136 ntBASIC3.43□□□□□ -1.86
ATG4DQ86TL0 AC022695.1-201ENST00000522089 237 ntBASIC3.43□□□□□ -1.86
ATG4DQ86TL0 AC020914.4-201ENST00000597690 277 ntBASIC3.43□□□□□ -1.86
ATG4DQ86TL0 RNA5SP108-201ENST00000605921 117 ntBASIC3.43□□□□□ -1.86
ATG4DQ86TL0 SNORD11B-201ENST00000607707 90 ntBASIC3.43□□□□□ -1.86
ATG4DQ86TL0 AC099778.2-201ENST00000610904 211 ntBASIC3.43□□□□□ -1.86
ATG4DQ86TL0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.43□□□□□ -1.86
ATG4DQ86TL0 U6.115-201ENST00000636045 103 ntBASIC3.43□□□□□ -1.86
ATG4DQ86TL0 AC012442.3-202ENST00000636742 206 ntBASIC3.43□□□□□ -1.86
ATG4DQ86TL0 AC068647.1-201ENST00000489539 2265 ntBASIC3.43□□□□□ -1.86
ATG4DQ86TL0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.43□□□□□ -1.86
ATG4DQ86TL0 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.43□□□□□ -1.86
ATG4DQ86TL0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ATG4DQ86TL0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.43□□□□□ -1.86
ATG4DQ86TL0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
ATG4DQ86TL0 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
ATG4DQ86TL0 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.42□□□□□ -1.86
ATG4DQ86TL0 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
ATG4DQ86TL0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.42□□□□□ -1.86
ATG4DQ86TL0 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
ATG4DQ86TL0 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.42□□□□□ -1.86
ATG4DQ86TL0 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ATG4DQ86TL0 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ATG4DQ86TL0 FAM35DP-201ENST00000323387 2712 ntBASIC3.42□□□□□ -1.86
ATG4DQ86TL0 U8.6-201ENST00000364939 135 ntBASIC3.42□□□□□ -1.86
ATG4DQ86TL0 U8.11-201ENST00000384699 133 ntBASIC3.42□□□□□ -1.86
ATG4DQ86TL0 U8.12-201ENST00000384701 133 ntBASIC3.42□□□□□ -1.86
ATG4DQ86TL0 RNA5SP390-201ENST00000410191 113 ntBASIC3.42□□□□□ -1.86
ATG4DQ86TL0 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ATG4DQ86TL0 AC027124.2-201ENST00000428249 105 ntBASIC3.42□□□□□ -1.86
ATG4DQ86TL0 AC245047.4-201ENST00000433189 144 ntBASIC3.42□□□□□ -1.86
ATG4DQ86TL0 U8.18-201ENST00000459285 133 ntBASIC3.42□□□□□ -1.86
ATG4DQ86TL0 RPS27AP10-201ENST00000496103 208 ntBASIC3.42□□□□□ -1.86
ATG4DQ86TL0 AIG1P1-201ENST00000503376 148 ntBASIC3.42□□□□□ -1.86
ATG4DQ86TL0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.42□□□□□ -1.86
ATG4DQ86TL0 CYCSP30-201ENST00000546447 172 ntBASIC3.42□□□□□ -1.86
ATG4DQ86TL0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.42□□□□□ -1.86
ATG4DQ86TL0 RPL30P11-203ENST00000598995 310 ntBASIC3.42□□□□□ -1.86
ATG4DQ86TL0 AC025754.2-201ENST00000606491 432 ntBASIC3.42□□□□□ -1.86
ATG4DQ86TL0 AC106754.2-201ENST00000623006 233 ntBASIC3.42□□□□□ -1.86
ATG4DQ86TL0 CR392039.5-201ENST00000623201 510 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms