Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 SNORA48.3-201ENST00000391081 134 ntBASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 RNU6-174P-201ENST00000410406 106 ntBASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 NCOR1P3-201ENST00000420479 303 ntBASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 AC244636.1-201ENST00000421152 228 ntBASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 AL356320.1-201ENST00000429616 163 ntBASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 USP9YP30-201ENST00000430729 455 ntBASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 RPS3AP52-201ENST00000435639 297 ntBASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 snoU13.6-201ENST00000458785 104 ntBASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 AC008413.1-201ENST00000511864 177 ntBASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 Y_RNA.691-201ENST00000516611 103 ntBASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 SNRPGP18-201ENST00000553000 214 ntBASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 RPL17P51-201ENST00000605218 238 ntBASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 AL773524.1-201ENST00000614065 229 ntBASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 AL359314.1-201ENST00000616913 261 ntBASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 U1.36-201ENST00000620684 176 ntBASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 SCARNA4-201ENST00000629045 128 ntBASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
NUP54Q7Z3B4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.09□□□□□ -2.08
NUP54Q7Z3B4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
NUP54Q7Z3B4 CENPCP1-201ENST00000533085 2578 ntBASIC2.08□□□□□ -2.08
NUP54Q7Z3B4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
NUP54Q7Z3B4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
NUP54Q7Z3B4 Y_RNA.184-201ENST00000363884 108 ntBASIC2.08□□□□□ -2.08
NUP54Q7Z3B4 SNORD81.2-201ENST00000365153 76 ntBASIC2.08□□□□□ -2.08
NUP54Q7Z3B4 MIR676-201ENST00000390702 67 ntBASIC2.08□□□□□ -2.08
NUP54Q7Z3B4 HMGN2P19-201ENST00000425149 265 ntBASIC2.08□□□□□ -2.08
NUP54Q7Z3B4 AC018634.1-201ENST00000437554 401 ntBASIC2.08□□□□□ -2.08
NUP54Q7Z3B4 OR2AQ1P-201ENST00000451972 200 ntBASIC2.08□□□□□ -2.08
NUP54Q7Z3B4 PRELID3BP1-201ENST00000457142 540 ntBASIC2.08□□□□□ -2.08
NUP54Q7Z3B4 RPL23AP75-201ENST00000491601 451 ntBASIC2.08□□□□□ -2.08
NUP54Q7Z3B4 AC090255.1-201ENST00000495779 349 ntBASIC2.08□□□□□ -2.08
NUP54Q7Z3B4 HMGN1P12-201ENST00000499125 195 ntBASIC2.08□□□□□ -2.08
NUP54Q7Z3B4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.08□□□□□ -2.08
NUP54Q7Z3B4 AC103851.1-201ENST00000506833 274 ntBASIC2.08□□□□□ -2.08
NUP54Q7Z3B4 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.08□□□□□ -2.08
NUP54Q7Z3B4 RNU6-1016P-201ENST00000516689 94 ntBASIC2.08□□□□□ -2.08
NUP54Q7Z3B4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.08□□□□□ -2.08
NUP54Q7Z3B4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.08□□□□□ -2.08
NUP54Q7Z3B4 MIR5696-201ENST00000578474 85 ntBASIC2.08□□□□□ -2.08
NUP54Q7Z3B4 AC018462.2-201ENST00000605375 395 ntBASIC2.08□□□□□ -2.08
NUP54Q7Z3B4 MIR1248-201ENST00000629190 106 ntBASIC2.08□□□□□ -2.08
NUP54Q7Z3B4 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.07□□□□□ -2.08
NUP54Q7Z3B4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
NUP54Q7Z3B4 RNU6-234P-201ENST00000365229 104 ntBASIC2.07□□□□□ -2.08
NUP54Q7Z3B4 RNU6-1093P-201ENST00000391194 107 ntBASIC2.07□□□□□ -2.08
NUP54Q7Z3B4 RNA5SP212-201ENST00000391223 107 ntBASIC2.07□□□□□ -2.08
NUP54Q7Z3B4 RPL37P10-201ENST00000412884 288 ntBASIC2.07□□□□□ -2.08
NUP54Q7Z3B4 AL358453.1-201ENST00000422522 250 ntBASIC2.07□□□□□ -2.08
NUP54Q7Z3B4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.07□□□□□ -2.08
NUP54Q7Z3B4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.07□□□□□ -2.08
NUP54Q7Z3B4 AC087477.1-201ENST00000465747 340 ntBASIC2.07□□□□□ -2.08
NUP54Q7Z3B4 ANXA2P1-201ENST00000505539 926 ntBASIC2.07□□□□□ -2.08
NUP54Q7Z3B4 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.07□□□□□ -2.08
NUP54Q7Z3B4 AL117351.2-201ENST00000513571 157 ntBASIC2.07□□□□□ -2.08
NUP54Q7Z3B4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.07□□□□□ -2.08
NUP54Q7Z3B4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.07□□□□□ -2.08
NUP54Q7Z3B4 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.07□□□□□ -2.08
NUP54Q7Z3B4 MIR4273-201ENST00000582824 84 ntBASIC2.07□□□□□ -2.08
NUP54Q7Z3B4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.07□□□□□ -2.08
NUP54Q7Z3B4 AC009831.4-201ENST00000620744 325 ntBASIC2.07□□□□□ -2.08
NUP54Q7Z3B4 AC064859.1-201ENST00000624741 174 ntBASIC2.07□□□□□ -2.08
NUP54Q7Z3B4 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.07□□□□□ -2.08
NUP54Q7Z3B4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
NUP54Q7Z3B4 SNORD115-3-201ENST00000363100 82 ntBASIC2.06□□□□□ -2.08
NUP54Q7Z3B4 RNU4-9P-201ENST00000364951 139 ntBASIC2.06□□□□□ -2.08
NUP54Q7Z3B4 Y_RNA.482-201ENST00000384377 111 ntBASIC2.06□□□□□ -2.08
NUP54Q7Z3B4 AL357139.1-201ENST00000407792 426 ntBASIC2.06□□□□□ -2.08
NUP54Q7Z3B4 RNA5SP425-201ENST00000410336 112 ntBASIC2.06□□□□□ -2.08
NUP54Q7Z3B4 AC104435.1-201ENST00000483483 166 ntBASIC2.06□□□□□ -2.08
NUP54Q7Z3B4 AC026782.1-201ENST00000512952 449 ntBASIC2.06□□□□□ -2.08
NUP54Q7Z3B4 RNA5SP200-201ENST00000516360 103 ntBASIC2.06□□□□□ -2.08
NUP54Q7Z3B4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.06□□□□□ -2.08
NUP54Q7Z3B4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.06□□□□□ -2.08
NUP54Q7Z3B4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.06□□□□□ -2.08
NUP54Q7Z3B4 AC090517.1-201ENST00000569307 266 ntBASIC2.06□□□□□ -2.08
NUP54Q7Z3B4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.06□□□□□ -2.08
NUP54Q7Z3B4 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.06□□□□□ -2.08
NUP54Q7Z3B4 CYP2C61P-201ENST00000604072 290 ntBASIC2.06□□□□□ -2.08
NUP54Q7Z3B4 AL355073.2-201ENST00000612106 557 ntBASIC2.06□□□□□ -2.08
NUP54Q7Z3B4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.06□□□□□ -2.08
NUP54Q7Z3B4 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.06□□□□□ -2.08
NUP54Q7Z3B4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.06□□□□□ -2.08
NUP54Q7Z3B4 AC099654.5-201ENST00000636479 350 ntBASIC2.06□□□□□ -2.08
NUP54Q7Z3B4 TPTEP1-208ENST00000636884 213 ntBASIC2.06□□□□□ -2.08
NUP54Q7Z3B4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.05□□□□□ -2.08
NUP54Q7Z3B4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
NUP54Q7Z3B4 Y_RNA.88-201ENST00000363029 99 ntBASIC2.05□□□□□ -2.08
NUP54Q7Z3B4 RNU6-1059P-201ENST00000363752 98 ntBASIC2.05□□□□□ -2.08
NUP54Q7Z3B4 SNORD115-32-201ENST00000364079 82 ntBASIC2.05□□□□□ -2.08
NUP54Q7Z3B4 RNU6-842P-201ENST00000384269 107 ntBASIC2.05□□□□□ -2.08
NUP54Q7Z3B4 RNU6-601P-201ENST00000384540 107 ntBASIC2.05□□□□□ -2.08
NUP54Q7Z3B4 SNORA8-201ENST00000384574 139 ntBASIC2.05□□□□□ -2.08
NUP54Q7Z3B4 MIR221-201ENST00000385135 110 ntBASIC2.05□□□□□ -2.08
NUP54Q7Z3B4 Z98742.3-201ENST00000418637 326 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms