Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 MTCO1P29-201ENST00000496868 288 ntBASIC1.98□□□□□ -2.09
NHLRC1Q6VVB1 RNU4-49P-201ENST00000516080 140 ntBASIC1.98□□□□□ -2.09
NHLRC1Q6VVB1 RNA5SP200-201ENST00000516360 103 ntBASIC1.98□□□□□ -2.09
NHLRC1Q6VVB1 SCARNA15.1-201ENST00000516384 125 ntBASIC1.98□□□□□ -2.09
NHLRC1Q6VVB1 SNORA31.16-201ENST00000516773 139 ntBASIC1.98□□□□□ -2.09
NHLRC1Q6VVB1 RNU7-30P-201ENST00000516835 62 ntBASIC1.98□□□□□ -2.09
NHLRC1Q6VVB1 MIR4742-201ENST00000581069 85 ntBASIC1.98□□□□□ -2.09
NHLRC1Q6VVB1 AC011712.1-201ENST00000588959 234 ntBASIC1.98□□□□□ -2.09
NHLRC1Q6VVB1 AC243960.4-201ENST00000600532 288 ntBASIC1.98□□□□□ -2.09
NHLRC1Q6VVB1 Z98751.3-201ENST00000604447 521 ntBASIC1.98□□□□□ -2.09
NHLRC1Q6VVB1 MIR7843-201ENST00000622274 79 ntBASIC1.98□□□□□ -2.09
NHLRC1Q6VVB1 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.98□□□□□ -2.09
NHLRC1Q6VVB1 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 RNU1-58P-201ENST00000362413 163 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 Y_RNA.138-201ENST00000363462 102 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 SNORD113-7-201ENST00000363762 77 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 SNORA32.2-201ENST00000384049 122 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 MIR208B-201ENST00000401172 77 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 MIR450B-201ENST00000401182 78 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 RNA5SP338-201ENST00000410495 85 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 RNU4-53P-201ENST00000410828 140 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 RNU4-14P-201ENST00000410858 122 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 RNA5SP450-201ENST00000411206 102 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 RN7SKP192-201ENST00000411291 327 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 NDUFA5P4-201ENST00000436704 385 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 AL353689.1-201ENST00000438895 199 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 AC010095.1-201ENST00000443543 144 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 snoU13.26-201ENST00000459452 105 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 RNU6-329P-201ENST00000459618 107 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 AC079804.2-201ENST00000490376 200 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 ANXA2P1-201ENST00000505539 926 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 RNU6-991P-201ENST00000516168 107 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 Y_RNA.701-201ENST00000516812 110 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 AP005597.4-201ENST00000526762 229 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 AC026371.1-201ENST00000551867 419 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 AC026464.5-201ENST00000562497 722 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 AL355375.2-201ENST00000574825 175 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 MIR3942-201ENST00000585264 109 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 BNIP3P25-201ENST00000596023 559 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 AL627230.6-201ENST00000611129 280 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 PCGEM1.1-201ENST00000613431 131 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 AC005296.1-201ENST00000616145 209 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 AC137590.2-201ENST00000619709 240 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 AC091932.3-201ENST00000624223 323 ntBASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
NHLRC1Q6VVB1 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.09
NHLRC1Q6VVB1 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 AL596028.1-201ENST00000326971 197 ntBASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 RNU6-1026P-201ENST00000384465 108 ntBASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 MT-TD-201ENST00000387419 68 ntBASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 SNORA48.3-201ENST00000391081 134 ntBASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 RNA5SP212-201ENST00000391223 107 ntBASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 MIR1262-201ENST00000408276 93 ntBASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 RNA5SP201-201ENST00000410316 124 ntBASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 AL135786.1-201ENST00000415892 214 ntBASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 AC093019.1-201ENST00000443135 252 ntBASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 HMGN1P10-201ENST00000474557 553 ntBASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 FAM206BP-201ENST00000510179 541 ntBASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 Y_RNA.675-201ENST00000516389 149 ntBASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 RNU5F-4P-201ENST00000516581 114 ntBASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 AC104576.1-201ENST00000524225 88 ntBASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 AC022432.1-201ENST00000595739 310 ntBASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 AC078795.3-201ENST00000602913 472 ntBASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 AC005520.5-201ENST00000613926 164 ntBASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 MIR1248-201ENST00000629190 106 ntBASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 TPTEP1-208ENST00000636884 213 ntBASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
NHLRC1Q6VVB1 Y_RNA.67-201ENST00000362870 100 ntBASIC1.95□□□□□ -2.1
NHLRC1Q6VVB1 Y_RNA.100-201ENST00000363141 102 ntBASIC1.95□□□□□ -2.1
NHLRC1Q6VVB1 SNORA16B-201ENST00000364674 135 ntBASIC1.95□□□□□ -2.1
NHLRC1Q6VVB1 Y_RNA.301-201ENST00000364990 103 ntBASIC1.95□□□□□ -2.1
NHLRC1Q6VVB1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
NHLRC1Q6VVB1 U3.40-201ENST00000408706 208 ntBASIC1.95□□□□□ -2.1
NHLRC1Q6VVB1 MTND3P8-201ENST00000412909 339 ntBASIC1.95□□□□□ -2.1
NHLRC1Q6VVB1 MTCYBP6-201ENST00000441810 138 ntBASIC1.95□□□□□ -2.1
NHLRC1Q6VVB1 AL118496.2-201ENST00000448300 230 ntBASIC1.95□□□□□ -2.1
NHLRC1Q6VVB1 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.95□□□□□ -2.1
NHLRC1Q6VVB1 RNU6-717P-201ENST00000459076 104 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms