Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 RPL23AP82-202ENST00000427528 469 ntBASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 RNU6-191P-201ENST00000516295 94 ntBASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 RNU6-426P-201ENST00000516464 97 ntBASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 SNORD116-25-201ENST00000516517 92 ntBASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 AP004607.1-201ENST00000524456 203 ntBASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 AL360157.1-201ENST00000565962 87 ntBASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 MIR3145-201ENST00000580727 82 ntBASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 AL133393.1-201ENST00000603277 287 ntBASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 FAM35DP-201ENST00000323387 2712 ntBASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 AL513302.2-201ENST00000562313 1842 ntBASIC3.54□□□□□ -1.84
CNKSR3Q6P9H4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.53□□□□□ -1.84
CNKSR3Q6P9H4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CNKSR3Q6P9H4 RNU4-80P-201ENST00000363200 141 ntBASIC3.53□□□□□ -1.84
CNKSR3Q6P9H4 RNU6-137P-201ENST00000363680 108 ntBASIC3.53□□□□□ -1.84
CNKSR3Q6P9H4 RNU6-898P-201ENST00000365627 104 ntBASIC3.53□□□□□ -1.84
CNKSR3Q6P9H4 Y_RNA.412-201ENST00000384001 104 ntBASIC3.53□□□□□ -1.84
CNKSR3Q6P9H4 RNU6-257P-201ENST00000410238 98 ntBASIC3.53□□□□□ -1.84
CNKSR3Q6P9H4 AC010095.1-201ENST00000443543 144 ntBASIC3.53□□□□□ -1.84
CNKSR3Q6P9H4 AC008885.1-201ENST00000514930 301 ntBASIC3.53□□□□□ -1.84
CNKSR3Q6P9H4 SNORA31.1-201ENST00000515993 133 ntBASIC3.53□□□□□ -1.84
CNKSR3Q6P9H4 SNORA31.5-201ENST00000516190 133 ntBASIC3.53□□□□□ -1.84
CNKSR3Q6P9H4 AC020895.1-201ENST00000595362 272 ntBASIC3.53□□□□□ -1.84
CNKSR3Q6P9H4 AC006023.1-201ENST00000603944 259 ntBASIC3.53□□□□□ -1.84
CNKSR3Q6P9H4 AL008718.3-201ENST00000610217 321 ntBASIC3.53□□□□□ -1.84
CNKSR3Q6P9H4 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.53□□□□□ -1.84
CNKSR3Q6P9H4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CNKSR3Q6P9H4 AC004944.1-201ENST00000517807 3059 ntBASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 AC017071.1-201ENST00000564407 2204 ntBASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 AL109809.4-201ENST00000603520 2185 ntBASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 RNU1-70P-201ENST00000362618 164 ntBASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 RNU4-84P-201ENST00000364200 139 ntBASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 SNORA36A-201ENST00000384221 132 ntBASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 SNORA7.4-201ENST00000384249 137 ntBASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 MIR569-201ENST00000385228 96 ntBASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 MIR591-201ENST00000385290 95 ntBASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 AC126124.2-201ENST00000413542 321 ntBASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 AC138623.1-201ENST00000418060 216 ntBASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 ARF4P2-201ENST00000430209 526 ntBASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 RPS15AP5-201ENST00000436276 388 ntBASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 AC005042.3-201ENST00000453230 174 ntBASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 RPL23AP14-201ENST00000468281 468 ntBASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 RPS4XP22-201ENST00000480755 780 ntBASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 MIR2114-201ENST00000516645 80 ntBASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 AP000867.2-201ENST00000532468 320 ntBASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 MIR5571-201ENST00000577998 113 ntBASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 MIR4672-201ENST00000583126 81 ntBASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 AC092628.2-201ENST00000622492 339 ntBASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.52□□□□□ -1.85
CNKSR3Q6P9H4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 AC073073.2-201ENST00000609827 2578 ntBASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 Y_RNA.101-201ENST00000363154 102 ntBASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 SNORD115-8-201ENST00000363856 82 ntBASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 RNU6-270P-201ENST00000364131 105 ntBASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 RNU6-312P-201ENST00000364629 107 ntBASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 SNORD115-38-201ENST00000365037 82 ntBASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 RNU6-215P-201ENST00000365169 102 ntBASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 AL031121.1-201ENST00000406553 254 ntBASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 RNU2-2P-201ENST00000410396 191 ntBASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 AC099548.1-201ENST00000421443 426 ntBASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 SEPT7P4-201ENST00000437076 306 ntBASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 AC007969.2-201ENST00000441891 191 ntBASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 HMGB3P8-201ENST00000449709 577 ntBASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 snoU13.28-201ENST00000459235 104 ntBASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 RNU6-711P-201ENST00000517255 106 ntBASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 AC016256.1-201ENST00000547971 354 ntBASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 LINC00933-203ENST00000559812 219 ntBASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 MIR2682-201ENST00000580305 110 ntBASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 RPL12P50-201ENST00000603116 116 ntBASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 RNU2-4P-201ENST00000606190 192 ntBASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 U2.15-201ENST00000611544 191 ntBASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 MIR486-1-201ENST00000612171 68 ntBASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 U2.16-201ENST00000613119 191 ntBASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 U2.12-201ENST00000613778 191 ntBASIC3.51□□□□□ -1.85
CNKSR3Q6P9H4 U2.9-201ENST00000615427 191 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms