Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 U2.5-201ENST00000619465 191 ntBASIC1.91□□□□□ -2.1
CASC4Q6P4E1 U2.10-201ENST00000620268 191 ntBASIC1.91□□□□□ -2.1
CASC4Q6P4E1 MIR3688-2-201ENST00000636963 87 ntBASIC1.91□□□□□ -2.1
CASC4Q6P4E1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.91□□□□□ -2.1
CASC4Q6P4E1 LINC02555-201ENST00000563933 1951 ntBASIC1.9□□□□□ -2.1
CASC4Q6P4E1 Y_RNA.135-201ENST00000363439 95 ntBASIC1.9□□□□□ -2.11
CASC4Q6P4E1 RNU6-438P-201ENST00000365561 103 ntBASIC1.9□□□□□ -2.11
CASC4Q6P4E1 SNORA18.2-201ENST00000383865 132 ntBASIC1.9□□□□□ -2.11
CASC4Q6P4E1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CASC4Q6P4E1 AC244636.1-201ENST00000421152 228 ntBASIC1.9□□□□□ -2.11
CASC4Q6P4E1 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.9□□□□□ -2.11
CASC4Q6P4E1 AL035666.1-201ENST00000446195 348 ntBASIC1.9□□□□□ -2.11
CASC4Q6P4E1 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.9□□□□□ -2.11
CASC4Q6P4E1 AF186996.7-201ENST00000492781 209 ntBASIC1.9□□□□□ -2.11
CASC4Q6P4E1 AP005639.2-201ENST00000527592 928 ntBASIC1.9□□□□□ -2.11
CASC4Q6P4E1 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.9□□□□□ -2.11
CASC4Q6P4E1 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.9□□□□□ -2.11
CASC4Q6P4E1 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.9□□□□□ -2.11
CASC4Q6P4E1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.9□□□□□ -2.11
CASC4Q6P4E1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.9□□□□□ -2.11
CASC4Q6P4E1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.9□□□□□ -2.11
CASC4Q6P4E1 RNU6-562P-201ENST00000362731 107 ntBASIC1.89□□□□□ -2.11
CASC4Q6P4E1 Y_RNA.212-201ENST00000364177 102 ntBASIC1.89□□□□□ -2.11
CASC4Q6P4E1 SNORA16.1-201ENST00000364597 132 ntBASIC1.89□□□□□ -2.11
CASC4Q6P4E1 SNORD31B-201ENST00000364977 69 ntBASIC1.89□□□□□ -2.11
CASC4Q6P4E1 RNU6-790P-201ENST00000384479 105 ntBASIC1.89□□□□□ -2.11
CASC4Q6P4E1 Y_RNA.573-201ENST00000384763 105 ntBASIC1.89□□□□□ -2.11
CASC4Q6P4E1 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CASC4Q6P4E1 AC019129.1-201ENST00000403786 261 ntBASIC1.89□□□□□ -2.11
CASC4Q6P4E1 RNU6-1148P-201ENST00000410992 104 ntBASIC1.89□□□□□ -2.11
CASC4Q6P4E1 RPS26P42-201ENST00000413485 326 ntBASIC1.89□□□□□ -2.11
CASC4Q6P4E1 AL445685.2-201ENST00000422551 342 ntBASIC1.89□□□□□ -2.11
CASC4Q6P4E1 AC139712.2-201ENST00000424302 339 ntBASIC1.89□□□□□ -2.11
CASC4Q6P4E1 RPS29P25-201ENST00000481709 171 ntBASIC1.89□□□□□ -2.11
CASC4Q6P4E1 RPS29P21-201ENST00000496272 170 ntBASIC1.89□□□□□ -2.11
CASC4Q6P4E1 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.89□□□□□ -2.11
CASC4Q6P4E1 MIR3942-201ENST00000585264 109 ntBASIC1.89□□□□□ -2.11
CASC4Q6P4E1 AC016727.2-201ENST00000603988 621 ntBASIC1.89□□□□□ -2.11
CASC4Q6P4E1 RPL17P51-201ENST00000605218 238 ntBASIC1.89□□□□□ -2.11
CASC4Q6P4E1 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.89□□□□□ -2.11
CASC4Q6P4E1 AC100810.6-201ENST00000638068 285 ntBASIC1.89□□□□□ -2.11
CASC4Q6P4E1 AC233981.2-201ENST00000611524 1614 ntBASIC1.88□□□□□ -2.11
CASC4Q6P4E1 SNORD50.1-201ENST00000362987 71 ntBASIC1.88□□□□□ -2.11
CASC4Q6P4E1 Y_RNA.453-201ENST00000384223 109 ntBASIC1.88□□□□□ -2.11
CASC4Q6P4E1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CASC4Q6P4E1 SNORA11.2-201ENST00000408318 127 ntBASIC1.88□□□□□ -2.11
CASC4Q6P4E1 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.88□□□□□ -2.11
CASC4Q6P4E1 MTND1P34-201ENST00000438556 671 ntBASIC1.88□□□□□ -2.11
CASC4Q6P4E1 RPL23AP6-201ENST00000446637 472 ntBASIC1.88□□□□□ -2.11
CASC4Q6P4E1 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.88□□□□□ -2.11
CASC4Q6P4E1 AC016925.1-201ENST00000458303 298 ntBASIC1.88□□□□□ -2.11
CASC4Q6P4E1 RNU1-131P-201ENST00000458943 161 ntBASIC1.88□□□□□ -2.11
CASC4Q6P4E1 RPS23P5-201ENST00000495419 428 ntBASIC1.88□□□□□ -2.11
CASC4Q6P4E1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.88□□□□□ -2.11
CASC4Q6P4E1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CASC4Q6P4E1 RNVU1-2-201ENST00000516326 135 ntBASIC1.88□□□□□ -2.11
CASC4Q6P4E1 RNU6-1314P-201ENST00000517139 104 ntBASIC1.88□□□□□ -2.11
CASC4Q6P4E1 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.88□□□□□ -2.11
CASC4Q6P4E1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.88□□□□□ -2.11
CASC4Q6P4E1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.88□□□□□ -2.11
CASC4Q6P4E1 AC139792.2-201ENST00000624218 587 ntBASIC1.88□□□□□ -2.11
CASC4Q6P4E1 AC022513.1-201ENST00000624512 117 ntBASIC1.88□□□□□ -2.11
CASC4Q6P4E1 MIR3662-201ENST00000637030 95 ntBASIC1.88□□□□□ -2.11
CASC4Q6P4E1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CASC4Q6P4E1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CASC4Q6P4E1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CASC4Q6P4E1 MIR549A-201ENST00000385268 96 ntBASIC1.87□□□□□ -2.11
CASC4Q6P4E1 SNORA48.1-201ENST00000390879 135 ntBASIC1.87□□□□□ -2.11
CASC4Q6P4E1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.87□□□□□ -2.11
CASC4Q6P4E1 Z82205.1-201ENST00000428456 297 ntBASIC1.87□□□□□ -2.11
CASC4Q6P4E1 UBE2V1P8-201ENST00000437166 265 ntBASIC1.87□□□□□ -2.11
CASC4Q6P4E1 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.87□□□□□ -2.11
CASC4Q6P4E1 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.87□□□□□ -2.11
CASC4Q6P4E1 PCMTD1P1-201ENST00000455560 355 ntBASIC1.87□□□□□ -2.11
CASC4Q6P4E1 AC130509.1-201ENST00000464158 433 ntBASIC1.87□□□□□ -2.11
CASC4Q6P4E1 AC087477.1-201ENST00000465747 340 ntBASIC1.87□□□□□ -2.11
CASC4Q6P4E1 AC092989.1-201ENST00000481235 277 ntBASIC1.87□□□□□ -2.11
CASC4Q6P4E1 RNU1-41P-201ENST00000516161 162 ntBASIC1.87□□□□□ -2.11
CASC4Q6P4E1 RNU6-718P-201ENST00000516166 105 ntBASIC1.87□□□□□ -2.11
CASC4Q6P4E1 RNU1-48P-201ENST00000516400 162 ntBASIC1.87□□□□□ -2.11
CASC4Q6P4E1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.87□□□□□ -2.11
CASC4Q6P4E1 MIR3945-201ENST00000581853 98 ntBASIC1.87□□□□□ -2.11
CASC4Q6P4E1 AC012493.3-201ENST00000604494 112 ntBASIC1.87□□□□□ -2.11
CASC4Q6P4E1 AC005562.2-201ENST00000618264 111 ntBASIC1.87□□□□□ -2.11
CASC4Q6P4E1 U1.36-201ENST00000620684 176 ntBASIC1.87□□□□□ -2.11
CASC4Q6P4E1 AC009033.1-201ENST00000624279 431 ntBASIC1.87□□□□□ -2.11
CASC4Q6P4E1 AC068137.4-201ENST00000638485 296 ntBASIC1.87□□□□□ -2.11
CASC4Q6P4E1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.87□□□□□ -2.11
CASC4Q6P4E1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
CASC4Q6P4E1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CASC4Q6P4E1 Y_RNA.6-201ENST00000362350 114 ntBASIC1.86□□□□□ -2.11
CASC4Q6P4E1 SNORD116-11-201ENST00000383882 92 ntBASIC1.86□□□□□ -2.11
CASC4Q6P4E1 RNU6-1026P-201ENST00000384465 108 ntBASIC1.86□□□□□ -2.11
CASC4Q6P4E1 MIR517A-201ENST00000385001 87 ntBASIC1.86□□□□□ -2.11
CASC4Q6P4E1 RNA5SP212-201ENST00000391223 107 ntBASIC1.86□□□□□ -2.11
CASC4Q6P4E1 AL356432.1-201ENST00000405809 419 ntBASIC1.86□□□□□ -2.11
CASC4Q6P4E1 RNA5SP118-201ENST00000410385 109 ntBASIC1.86□□□□□ -2.11
CASC4Q6P4E1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.86□□□□□ -2.11
CASC4Q6P4E1 EIF4EP2-201ENST00000422816 654 ntBASIC1.86□□□□□ -2.11
CASC4Q6P4E1 AL353572.1-201ENST00000442490 417 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms