Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
H3F3CQ6NXT2 AC068205.3-201ENST00000636385 468 ntBASIC1.24□□□□□ -2.21
H3F3CQ6NXT2 ELL2P3-201ENST00000457883 1602 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 U3.9-201ENST00000363823 204 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 Y_RNA.409-201ENST00000383990 98 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 RNU6-296P-201ENST00000384608 107 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 MIR520A-201ENST00000384862 85 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 RNU6-1158P-201ENST00000391167 107 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 AF228730.1-201ENST00000397972 663 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 MTCYBP2-201ENST00000407745 171 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 AC078809.1-201ENST00000427601 140 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 AL606489.2-201ENST00000433886 234 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 HSPE1P9-201ENST00000440046 311 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 AC073415.1-201ENST00000449240 153 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 RPL31P3-201ENST00000458430 332 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 RNU1-123P-201ENST00000458950 160 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 RNU7-180P-201ENST00000459240 63 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 TOMM22P6-201ENST00000465035 409 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 RPL9P9-202ENST00000466501 579 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 GMFBP1-201ENST00000467831 427 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 RPL26P26-201ENST00000480251 434 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 AC016632.1-201ENST00000503994 196 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 AC091435.1-201ENST00000505442 584 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 AC104576.1-201ENST00000524225 88 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 AP003033.1-201ENST00000527244 415 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 AC090517.1-201ENST00000569307 266 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 HULC.1-201ENST00000612720 240 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 AL157834.3-201ENST00000615543 103 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 AC009541.1-201ENST00000438279 2662 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 MTND5P9-201ENST00000503854 1755 ntBASIC1.23□□□□□ -2.21
H3F3CQ6NXT2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.22□□□□□ -2.21
H3F3CQ6NXT2 Y_RNA.399-201ENST00000383955 105 ntBASIC1.22□□□□□ -2.21
H3F3CQ6NXT2 SNORD26-201ENST00000384147 75 ntBASIC1.22□□□□□ -2.21
H3F3CQ6NXT2 SNORD116-8-201ENST00000384365 95 ntBASIC1.22□□□□□ -2.21
H3F3CQ6NXT2 MIR549A-201ENST00000385268 96 ntBASIC1.22□□□□□ -2.21
H3F3CQ6NXT2 RNU6-1093P-201ENST00000391194 107 ntBASIC1.22□□□□□ -2.21
H3F3CQ6NXT2 RN7SKP61-201ENST00000410642 295 ntBASIC1.22□□□□□ -2.21
H3F3CQ6NXT2 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.22□□□□□ -2.21
H3F3CQ6NXT2 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.22□□□□□ -2.21
H3F3CQ6NXT2 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.22□□□□□ -2.21
H3F3CQ6NXT2 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.22□□□□□ -2.21
H3F3CQ6NXT2 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.22□□□□□ -2.21
H3F3CQ6NXT2 AC079140.2-201ENST00000506193 142 ntBASIC1.22□□□□□ -2.21
H3F3CQ6NXT2 RNA5SP61-201ENST00000516453 100 ntBASIC1.22□□□□□ -2.21
H3F3CQ6NXT2 RNU6-323P-201ENST00000521915 107 ntBASIC1.22□□□□□ -2.21
H3F3CQ6NXT2 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.22□□□□□ -2.21
H3F3CQ6NXT2 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.22□□□□□ -2.21
H3F3CQ6NXT2 AC069114.2-201ENST00000604699 304 ntBASIC1.22□□□□□ -2.21
H3F3CQ6NXT2 AC109347.2-201ENST00000610220 349 ntBASIC1.22□□□□□ -2.21
H3F3CQ6NXT2 AC083806.3-201ENST00000614016 455 ntBASIC1.22□□□□□ -2.21
H3F3CQ6NXT2 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.22□□□□□ -2.21
H3F3CQ6NXT2 AL450472.1-202ENST00000637286 180 ntBASIC1.22□□□□□ -2.21
H3F3CQ6NXT2 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 AC092268.1-201ENST00000342691 405 ntBASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 Y_RNA.1-201ENST00000352915 104 ntBASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 MIR340-201ENST00000362125 95 ntBASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 SNORD1A-201ENST00000364968 72 ntBASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 RNU6-203P-201ENST00000384038 104 ntBASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 SNORA32.2-201ENST00000384049 122 ntBASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 Y_RNA.553-201ENST00000384670 102 ntBASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 RNU6-360P-201ENST00000390944 104 ntBASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 SNORA40.6-201ENST00000391153 128 ntBASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 RNA5SP201-201ENST00000410316 124 ntBASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 MTCO2P19-201ENST00000427513 598 ntBASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 MTND3P9-201ENST00000429526 346 ntBASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 AL133396.1-201ENST00000432048 687 ntBASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 MTCO2P16-201ENST00000436962 677 ntBASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 AC004223.1-201ENST00000479840 271 ntBASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 AC010424.1-201ENST00000506336 297 ntBASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 RN7SKP298-201ENST00000515950 94 ntBASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 SNORD60.2-201ENST00000516883 86 ntBASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 AC019176.1-201ENST00000518519 225 ntBASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 AC025423.5-201ENST00000550230 219 ntBASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 AC019288.1-201ENST00000557918 224 ntBASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 MTCO3P23-201ENST00000561363 289 ntBASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 MIR3937-201ENST00000580135 106 ntBASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 MIR8070-201ENST00000616510 88 ntBASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 SNORA43.4-201ENST00000629559 138 ntBASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.21□□□□□ -2.22
H3F3CQ6NXT2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.2□□□□□ -2.22
H3F3CQ6NXT2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
H3F3CQ6NXT2 RNU6-545P-201ENST00000362681 104 ntBASIC1.2□□□□□ -2.22
H3F3CQ6NXT2 SNORD33-201ENST00000362761 85 ntBASIC1.2□□□□□ -2.22
H3F3CQ6NXT2 SNORA18.2-201ENST00000383865 132 ntBASIC1.2□□□□□ -2.22
H3F3CQ6NXT2 RNU5A-6P-201ENST00000384136 116 ntBASIC1.2□□□□□ -2.22
H3F3CQ6NXT2 RNU6-1026P-201ENST00000384465 108 ntBASIC1.2□□□□□ -2.22
H3F3CQ6NXT2 MIR150-201ENST00000385048 84 ntBASIC1.2□□□□□ -2.22
H3F3CQ6NXT2 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
H3F3CQ6NXT2 AL663109.1-201ENST00000411498 844 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 159.3 ms