Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AL355598.1-201ENST00000604169 202 ntBASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 AC073968.1-201ENST00000618594 637 ntBASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 SNORA3B-201ENST00000391305 131 ntBASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 AL357139.1-201ENST00000407792 426 ntBASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 MTCYBP32-201ENST00000427945 1084 ntBASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 MTCO1P19-201ENST00000443487 500 ntBASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 AC110760.3-202ENST00000515177 371 ntBASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 AC011195.1-201ENST00000578177 177 ntBASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 AC098483.2-201ENST00000603158 454 ntBASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 MIR6079-201ENST00000635807 62 ntBASIC-0.49□□□□□ -2.49
VPS13DQ5THJ4 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 MIR649-201ENST00000384843 97 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 MIR1827-201ENST00000408549 66 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 RNU4-46P-201ENST00000410818 138 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 AL592310.1-201ENST00000414330 671 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 AC024995.1-201ENST00000523014 93 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 AP000763.2-201ENST00000540641 163 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 AC105036.1-201ENST00000566222 271 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 RNU1-76P-201ENST00000362903 159 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 RNU4-76P-201ENST00000364509 141 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 RPL31P54-201ENST00000429803 370 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 MRPL42P4-201ENST00000453267 443 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 SNORA13-201ENST00000458790 133 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 AL442163.3-201ENST00000554110 156 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 AC125232.2-201ENST00000592457 143 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 BCRP9-201ENST00000605312 388 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 AC009269.6-201ENST00000621778 588 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 SNORA81-201ENST00000408493 178 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 MTCO1P5-201ENST00000433573 344 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 AC087499.4-201ENST00000448505 178 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 AC137800.2-201ENST00000574375 120 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 AC120349.3-201ENST00000624377 529 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 RNU6-161P-201ENST00000363051 106 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 SNORA72.1-201ENST00000363485 129 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 SNORA4.2-201ENST00000365313 147 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 MTCO3P1-205ENST00000422088 832 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 TPT1P7-201ENST00000458300 517 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 RNU7-34P-201ENST00000459394 64 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 AC079598.5-201ENST00000547460 117 ntBASIC-0.5□□□□□ -2.49
VPS13DQ5THJ4 MIR548B-201ENST00000385247 97 ntBASIC-0.51□□□□□ -2.49
VPS13DQ5THJ4 SNORD83B-201ENST00000386745 93 ntBASIC-0.51□□□□□ -2.49
VPS13DQ5THJ4 RNU6-333P-201ENST00000459117 107 ntBASIC-0.51□□□□□ -2.49
VPS13DQ5THJ4 RNU6-1183P-201ENST00000517054 60 ntBASIC-0.51□□□□□ -2.49
VPS13DQ5THJ4 MIR4441-201ENST00000582623 100 ntBASIC-0.51□□□□□ -2.49
VPS13DQ5THJ4 RNU4-36P-201ENST00000364294 144 ntBASIC-0.51□□□□□ -2.49
VPS13DQ5THJ4 RNU6-244P-201ENST00000391028 104 ntBASIC-0.51□□□□□ -2.49
VPS13DQ5THJ4 RNU6-1300P-201ENST00000391046 108 ntBASIC-0.51□□□□□ -2.49
VPS13DQ5THJ4 AC002486.1-201ENST00000435098 391 ntBASIC-0.51□□□□□ -2.49
VPS13DQ5THJ4 RN7SKP19-201ENST00000516016 252 ntBASIC-0.51□□□□□ -2.49
VPS13DQ5THJ4 RNU6-897P-201ENST00000517135 105 ntBASIC-0.51□□□□□ -2.49
VPS13DQ5THJ4 AC090572.1-201ENST00000519251 160 ntBASIC-0.51□□□□□ -2.49
VPS13DQ5THJ4 AL590396.4-201ENST00000636779 956 ntBASIC-0.51□□□□□ -2.49
VPS13DQ5THJ4 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC-0.51□□□□□ -2.49
VPS13DQ5THJ4 MIR520G-201ENST00000385064 90 ntBASIC-0.51□□□□□ -2.49
VPS13DQ5THJ4 MIR520H-201ENST00000385126 88 ntBASIC-0.51□□□□□ -2.49
VPS13DQ5THJ4 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.51□□□□□ -2.49
VPS13DQ5THJ4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.51□□□□□ -2.49
VPS13DQ5THJ4 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC-0.51□□□□□ -2.49
VPS13DQ5THJ4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.51□□□□□ -2.49
VPS13DQ5THJ4 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.51□□□□□ -2.49
VPS13DQ5THJ4 RNU6-27P-201ENST00000516146 107 ntBASIC-0.51□□□□□ -2.49
VPS13DQ5THJ4 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.51□□□□□ -2.49
VPS13DQ5THJ4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC-0.51□□□□□ -2.49
VPS13DQ5THJ4 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC-0.51□□□□□ -2.49
VPS13DQ5THJ4 MT-TY-201ENST00000387409 66 ntBASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 MIR548L-201ENST00000408303 86 ntBASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 C1DP2-201ENST00000418167 426 ntBASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 PPP1R11P2-201ENST00000423543 382 ntBASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 GPM6BP2-201ENST00000432046 144 ntBASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 GPM6BP1-201ENST00000446387 144 ntBASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 C1DP4-201ENST00000455429 424 ntBASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 RNU6-965P-201ENST00000516721 96 ntBASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 AL353997.4-201ENST00000586196 166 ntBASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 AC004223.2-201ENST00000590309 544 ntBASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 AC245008.1-201ENST00000608123 476 ntBASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 RNU6-743P-201ENST00000364151 106 ntBASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 RPS20P2-201ENST00000402520 389 ntBASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 AC092809.3-201ENST00000415453 231 ntBASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 SNORA25.11-201ENST00000515935 105 ntBASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 RNU6-24P-201ENST00000384440 107 ntBASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 snoU109.2-201ENST00000459316 135 ntBASIC-0.52□□□□□ -2.49
VPS13DQ5THJ4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC-0.52□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms