Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 AL353149.1-201ENST00000610667 244 ntBASIC0.95□□□□□ -2.26
ZNF404Q494X3 AC008147.4-201ENST00000617570 1204 ntBASIC0.95□□□□□ -2.26
ZNF404Q494X3 AC007494.3-201ENST00000624660 743 ntBASIC0.95□□□□□ -2.26
ZNF404Q494X3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.95□□□□□ -2.26
ZNF404Q494X3 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
ZNF404Q494X3 FGF7P2-201ENST00000332473 296 ntBASIC0.94□□□□□ -2.26
ZNF404Q494X3 RNU6-545P-201ENST00000362681 104 ntBASIC0.94□□□□□ -2.26
ZNF404Q494X3 RNU4-21P-201ENST00000362802 126 ntBASIC0.94□□□□□ -2.26
ZNF404Q494X3 SNORA25.8-201ENST00000364831 128 ntBASIC0.94□□□□□ -2.26
ZNF404Q494X3 SNORA18.2-201ENST00000383865 132 ntBASIC0.94□□□□□ -2.26
ZNF404Q494X3 RNU6-418P-201ENST00000384035 107 ntBASIC0.94□□□□□ -2.26
ZNF404Q494X3 RNU6-1093P-201ENST00000391194 107 ntBASIC0.94□□□□□ -2.26
ZNF404Q494X3 RNU2-29P-201ENST00000410423 189 ntBASIC0.94□□□□□ -2.26
ZNF404Q494X3 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.94□□□□□ -2.26
ZNF404Q494X3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.94□□□□□ -2.26
ZNF404Q494X3 MTCO2P34-201ENST00000421994 607 ntBASIC0.94□□□□□ -2.26
ZNF404Q494X3 AC013410.2-201ENST00000422627 201 ntBASIC0.94□□□□□ -2.26
ZNF404Q494X3 CST2P1-201ENST00000425770 87 ntBASIC0.94□□□□□ -2.26
ZNF404Q494X3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.94□□□□□ -2.26
ZNF404Q494X3 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.94□□□□□ -2.26
ZNF404Q494X3 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.94□□□□□ -2.26
ZNF404Q494X3 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.94□□□□□ -2.26
ZNF404Q494X3 AC067942.3-201ENST00000512025 362 ntBASIC0.94□□□□□ -2.26
ZNF404Q494X3 AC011406.1-201ENST00000512440 370 ntBASIC0.94□□□□□ -2.26
ZNF404Q494X3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.94□□□□□ -2.26
ZNF404Q494X3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.94□□□□□ -2.26
ZNF404Q494X3 RAB11AP2-201ENST00000545905 639 ntBASIC0.94□□□□□ -2.26
ZNF404Q494X3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.94□□□□□ -2.26
ZNF404Q494X3 MIR3915-201ENST00000578518 97 ntBASIC0.94□□□□□ -2.26
ZNF404Q494X3 MIR4295-201ENST00000585286 85 ntBASIC0.94□□□□□ -2.26
ZNF404Q494X3 AL355802.3-201ENST00000607571 545 ntBASIC0.94□□□□□ -2.26
ZNF404Q494X3 U2.17-201ENST00000611454 95 ntBASIC0.94□□□□□ -2.26
ZNF404Q494X3 AC126177.8-201ENST00000618339 1015 ntBASIC0.94□□□□□ -2.26
ZNF404Q494X3 AC009161.2-201ENST00000624626 138 ntBASIC0.94□□□□□ -2.26
ZNF404Q494X3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.94□□□□□ -2.26
ZNF404Q494X3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
ZNF404Q494X3 RNU6-181P-201ENST00000363225 107 ntBASIC0.93□□□□□ -2.26
ZNF404Q494X3 RNU5A-2P-201ENST00000384337 116 ntBASIC0.93□□□□□ -2.26
ZNF404Q494X3 MIR300-201ENST00000401138 83 ntBASIC0.93□□□□□ -2.26
ZNF404Q494X3 RNU2-9P-201ENST00000410194 145 ntBASIC0.93□□□□□ -2.26
ZNF404Q494X3 RNU6-248P-201ENST00000410720 107 ntBASIC0.93□□□□□ -2.26
ZNF404Q494X3 COX6CP10-201ENST00000416832 224 ntBASIC0.93□□□□□ -2.26
ZNF404Q494X3 AC090960.1-201ENST00000421072 306 ntBASIC0.93□□□□□ -2.26
ZNF404Q494X3 AC060773.1-201ENST00000421698 310 ntBASIC0.93□□□□□ -2.26
ZNF404Q494X3 AC244505.5-201ENST00000443639 207 ntBASIC0.93□□□□□ -2.26
ZNF404Q494X3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.93□□□□□ -2.26
ZNF404Q494X3 AC073910.1-201ENST00000445047 438 ntBASIC0.93□□□□□ -2.26
ZNF404Q494X3 SNRPGP9-201ENST00000456025 225 ntBASIC0.93□□□□□ -2.26
ZNF404Q494X3 SNRPFP3-201ENST00000457792 225 ntBASIC0.93□□□□□ -2.26
ZNF404Q494X3 HMGN1P7-201ENST00000491722 313 ntBASIC0.93□□□□□ -2.26
ZNF404Q494X3 AC105417.1-201ENST00000514691 285 ntBASIC0.93□□□□□ -2.26
ZNF404Q494X3 RNU6-415P-201ENST00000516252 97 ntBASIC0.93□□□□□ -2.26
ZNF404Q494X3 RNA5SP384-201ENST00000516615 116 ntBASIC0.93□□□□□ -2.26
ZNF404Q494X3 RNU6-445P-201ENST00000516949 107 ntBASIC0.93□□□□□ -2.26
ZNF404Q494X3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.93□□□□□ -2.26
ZNF404Q494X3 AC090115.3-201ENST00000553218 849 ntBASIC0.93□□□□□ -2.26
ZNF404Q494X3 CYP3A52P-201ENST00000563326 91 ntBASIC0.93□□□□□ -2.26
ZNF404Q494X3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.93□□□□□ -2.26
ZNF404Q494X3 AP001596.2-201ENST00000608410 312 ntBASIC0.93□□□□□ -2.26
ZNF404Q494X3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.93□□□□□ -2.26
ZNF404Q494X3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.93□□□□□ -2.26
ZNF404Q494X3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.93□□□□□ -2.26
ZNF404Q494X3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
ZNF404Q494X3 RNA5SP327-201ENST00000362494 101 ntBASIC0.92□□□□□ -2.26
ZNF404Q494X3 RNU6-562P-201ENST00000362731 107 ntBASIC0.92□□□□□ -2.26
ZNF404Q494X3 Y_RNA.201-201ENST00000364052 96 ntBASIC0.92□□□□□ -2.26
ZNF404Q494X3 RNY3P10-201ENST00000384764 102 ntBASIC0.92□□□□□ -2.26
ZNF404Q494X3 MIR194-1-201ENST00000384892 85 ntBASIC0.92□□□□□ -2.26
ZNF404Q494X3 MIR618-201ENST00000385287 98 ntBASIC0.92□□□□□ -2.26
ZNF404Q494X3 MT-TH-201ENST00000387441 69 ntBASIC0.92□□□□□ -2.26
ZNF404Q494X3 RNU6-1106P-201ENST00000390845 107 ntBASIC0.92□□□□□ -2.26
ZNF404Q494X3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.92□□□□□ -2.26
ZNF404Q494X3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.92□□□□□ -2.26
ZNF404Q494X3 SNRPEP10-201ENST00000420249 274 ntBASIC0.92□□□□□ -2.26
ZNF404Q494X3 PIGFP2-201ENST00000421400 651 ntBASIC0.92□□□□□ -2.26
ZNF404Q494X3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.92□□□□□ -2.26
ZNF404Q494X3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.92□□□□□ -2.26
ZNF404Q494X3 C1DP4-201ENST00000455429 424 ntBASIC0.92□□□□□ -2.26
ZNF404Q494X3 AC087343.1-201ENST00000477341 475 ntBASIC0.92□□□□□ -2.26
ZNF404Q494X3 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.92□□□□□ -2.26
ZNF404Q494X3 AC010486.2-201ENST00000505572 483 ntBASIC0.92□□□□□ -2.26
ZNF404Q494X3 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.92□□□□□ -2.26
ZNF404Q494X3 RNU2-34P-201ENST00000516534 121 ntBASIC0.92□□□□□ -2.26
ZNF404Q494X3 DEFB131C-201ENST00000528817 165 ntBASIC0.92□□□□□ -2.26
ZNF404Q494X3 AL137161.1-201ENST00000532231 390 ntBASIC0.92□□□□□ -2.26
ZNF404Q494X3 SUB1P2-201ENST00000556401 297 ntBASIC0.92□□□□□ -2.26
ZNF404Q494X3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.92□□□□□ -2.26
ZNF404Q494X3 MIR4753-201ENST00000585119 83 ntBASIC0.92□□□□□ -2.26
ZNF404Q494X3 NIFKP6-201ENST00000598115 845 ntBASIC0.92□□□□□ -2.26
ZNF404Q494X3 AC080078.3-201ENST00000605407 463 ntBASIC0.92□□□□□ -2.26
ZNF404Q494X3 AL360219.1-201ENST00000610230 366 ntBASIC0.92□□□□□ -2.26
ZNF404Q494X3 AC009541.1-201ENST00000438279 2662 ntBASIC0.92□□□□□ -2.26
ZNF404Q494X3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
ZNF404Q494X3 BX322639.1-202ENST00000423987 2213 ntBASIC0.91□□□□□ -2.26
ZNF404Q494X3 RNU1-22P-201ENST00000363334 158 ntBASIC0.91□□□□□ -2.26
ZNF404Q494X3 Y_RNA.164-201ENST00000363709 102 ntBASIC0.91□□□□□ -2.26
ZNF404Q494X3 MIR1283-1-201ENST00000408494 87 ntBASIC0.91□□□□□ -2.26
ZNF404Q494X3 AL365203.2-201ENST00000423444 196 ntBASIC0.91□□□□□ -2.26
ZNF404Q494X3 SNX2P2-201ENST00000424553 323 ntBASIC0.91□□□□□ -2.26
ZNF404Q494X3 CETN4P-201ENST00000432407 469 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms