Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 EIF4EP4-201ENST00000424916 578 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 AL358176.2-201ENST00000425769 204 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 RPL23AP95-201ENST00000426806 265 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 IFNA11P-201ENST00000446352 526 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 AL513124.1-201ENST00000450410 614 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 AL353752.1-201ENST00000454946 260 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 MTND5P22-201ENST00000458380 195 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 RN7SKP210-201ENST00000459176 261 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 AC140059.1-201ENST00000489238 361 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 AC091874.1-201ENST00000511402 339 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 RNU6-1046P-201ENST00000516538 107 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 RNU7-4P-201ENST00000516961 62 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 IGLV3-17-201ENST00000519099 244 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 AL590705.4-201ENST00000532209 134 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 MRPS36P4-201ENST00000534436 298 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 AC004584.2-201ENST00000570407 410 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 AL138963.2-201ENST00000605137 226 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 AC087588.2-201ENST00000617667 426 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 AL162373.1-201ENST00000620433 407 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 MIR4272-201ENST00000635924 64 ntBASIC2.09□□□□□ -2.07
SNAI3Q3KNW1 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
SNAI3Q3KNW1 AC009541.1-201ENST00000438279 2662 ntBASIC2.09□□□□□ -2.08
SNAI3Q3KNW1 AC091812.1-201ENST00000432235 1948 ntBASIC2.09□□□□□ -2.08
SNAI3Q3KNW1 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.09□□□□□ -2.08
SNAI3Q3KNW1 Y_RNA.39-201ENST00000362620 98 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 Y_RNA.133-201ENST00000363428 110 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 SNORA3A-201ENST00000364113 130 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 RNU1-51P-201ENST00000365345 176 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 RNU6-1105P-201ENST00000384774 107 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 MIR544A-201ENST00000384855 91 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 MIR625-201ENST00000385047 85 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 RNU6-700P-201ENST00000391043 107 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 MTCYBP2-201ENST00000407745 171 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 RNA5SP390-201ENST00000410191 113 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 AC011753.1-201ENST00000451001 220 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 AC112492.4-201ENST00000456549 352 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 AP001486.1-201ENST00000463339 476 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 AC015911.1-201ENST00000495111 156 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 CKS1BP2-201ENST00000497342 240 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 RNU6-764P-201ENST00000516396 105 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 RNU5B-3P-201ENST00000516601 115 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 PRELID2P1-201ENST00000552837 301 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 AC027176.1-201ENST00000560204 514 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 AC104581.2-201ENST00000572227 430 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 AL137847.3-201ENST00000611521 109 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 MIR1244-1-201ENST00000612829 85 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 MIR1244-3-201ENST00000635744 85 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 MIR1244-2-201ENST00000636449 85 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 MIR1244-4-202ENST00000636813 85 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 MTND5P16-201ENST00000460269 1703 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 AC007336.1-201ENST00000576365 3828 ntBASIC2.08□□□□□ -2.08
SNAI3Q3KNW1 RBBP8P1-201ENST00000449447 1844 ntBASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 RNU6-874P-201ENST00000362390 105 ntBASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 RNY3P11-201ENST00000364153 102 ntBASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 RNU6-1286P-201ENST00000383871 107 ntBASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 Y_RNA.527-201ENST00000384573 102 ntBASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 MIR524-201ENST00000385242 87 ntBASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 SNORA12.2-201ENST00000391040 156 ntBASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 AC007098.1-201ENST00000420122 367 ntBASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 AC096644.2-201ENST00000429278 159 ntBASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 MTND3P2-201ENST00000438452 342 ntBASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 RPL30P1-201ENST00000488676 339 ntBASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 RPL23AP75-201ENST00000491601 451 ntBASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 AC021146.2-201ENST00000504736 556 ntBASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 SNORA40.14-201ENST00000516543 86 ntBASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 AC144568.1-201ENST00000520139 137 ntBASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 AC079598.5-201ENST00000547460 117 ntBASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 AC121758.2-201ENST00000553271 193 ntBASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 AC090897.2-201ENST00000581715 130 ntBASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 MIR5188-201ENST00000583467 113 ntBASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 AC067747.1-201ENST00000608026 250 ntBASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 AC245884.12-201ENST00000615364 59 ntBASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 AC008121.3-201ENST00000618726 433 ntBASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 MIR1291-201ENST00000627649 87 ntBASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 SNORA43.4-201ENST00000629559 138 ntBASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.07□□□□□ -2.08
SNAI3Q3KNW1 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 AC233981.2-201ENST00000611524 1614 ntBASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 RNU6-1141P-201ENST00000364520 107 ntBASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 Y_RNA.405-201ENST00000383979 100 ntBASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 RNU6-968P-201ENST00000384076 107 ntBASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 Y_RNA.451-201ENST00000384200 100 ntBASIC2.06□□□□□ -2.08
SNAI3Q3KNW1 Y_RNA.455-201ENST00000384230 98 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 161.6 ms